RNA–Protein interactions for RNA: ENST00000295688.7

CCT3-201, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT3, Length 2,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-201ENST00000295688 FCER1AP12319 257 aa16.47■□□□□ 0.23
CCT3-201ENST00000295688 PAFAH1B1P43034 410 aa16.47■□□□□ 0.23
CCT3-201ENST00000295688 KIF11P52732 1056 aa16.47■□□□□ 0.23
CCT3-201ENST00000295688 LRRC63Q05C16 580 aa16.47■□□□□ 0.23
CCT3-201ENST00000295688 SLC35G1Q2M3R5 365 aa16.47■□□□□ 0.23
CCT3-201ENST00000295688 TUBB8Q3ZCM7 444 aa16.47■□□□□ 0.23
CCT3-201ENST00000295688 GBP6Q6ZN66 633 aa16.47■□□□□ 0.23
CCT3-201ENST00000295688 USP17L1Q7RTZ2 530 aa16.47■□□□□ 0.23
CCT3-201ENST00000295688 GUF1Q8N442 669 aaKnown RBP16.47■□□□□ 0.23
CCT3-201ENST00000295688 ZNF713Q8N859 430 aaPredicted RBP16.47■□□□□ 0.23
CCT3-201ENST00000295688 RAB34Q9BZG1 259 aa16.47■□□□□ 0.23
CCT3-201ENST00000295688 SEC63Q9UGP8 760 aaKnown RBP16.47■□□□□ 0.23
CCT3-201ENST00000295688 TSKSQ9UJT2 592 aa16.47■□□□□ 0.23
CCT3-201ENST00000295688 STX8Q9UNK0 236 aa16.47■□□□□ 0.23
CCT3-201ENST00000295688 SIK3Q9Y2K2 1263 aa16.47■□□□□ 0.23
CCT3-201ENST00000295688 DUSP10Q9Y6W6 482 aa16.47■□□□□ 0.23
CCT3-201ENST00000295688 GOLGA8KD6RF30 607 aa16.46■□□□□ 0.23
CCT3-201ENST00000295688 AKR1B10O60218 316 aa16.46■□□□□ 0.23
CCT3-201ENST00000295688 SHOX2O60902 331 aaPredicted RBP16.46■□□□□ 0.23
CCT3-201ENST00000295688 C2orf54Q08AI8 447 aa16.46■□□□□ 0.23
CCT3-201ENST00000295688 PSMD2Q13200 908 aa16.46■□□□□ 0.23
CCT3-201ENST00000295688 C2CD5Q86YS7 1000 aa16.46■□□□□ 0.23
CCT3-201ENST00000295688 DYNLL2Q96FJ2 89 aa16.46■□□□□ 0.23
CCT3-201ENST00000295688 NUCKS1Q9H1E3 243 aaKnown RBP16.46■□□□□ 0.23
CCT3-201ENST00000295688 SEMA6BQ9H3T3 888 aa16.46■□□□□ 0.23
CCT3-201ENST00000295688 RNF14Q9UBS8 474 aa16.46■□□□□ 0.23
CCT3-201ENST00000295688 ESYT2A0FGR8 921 aa16.45■□□□□ 0.22
CCT3-201ENST00000295688 GOLGA6CA6NDK9 693 aa16.45■□□□□ 0.22
CCT3-201ENST00000295688 ZNF263O14978 683 aa16.45■□□□□ 0.22
CCT3-201ENST00000295688 GOLGA6DP0CG33 693 aa16.45■□□□□ 0.22
CCT3-201ENST00000295688 TECP42680 631 aa16.45■□□□□ 0.22
CCT3-201ENST00000295688 TMEM266Q2M3C6 531 aa16.45■□□□□ 0.22
CCT3-201ENST00000295688 GLE1Q53GS7 698 aaKnown RBP16.45■□□□□ 0.22
CCT3-201ENST00000295688 CCDC181Q5TID7 509 aa16.45■□□□□ 0.22
CCT3-201ENST00000295688 FOXR1Q6PIV2 292 aa16.45■□□□□ 0.22
CCT3-201ENST00000295688 RNF10Q8N5U6 811 aaKnown RBP16.45■□□□□ 0.22
CCT3-201ENST00000295688 MARCH10Q8NA82 808 aaPredicted RBP16.45■□□□□ 0.22
CCT3-201ENST00000295688 KIAA0895Q8NCT3 520 aa16.45■□□□□ 0.22
CCT3-201ENST00000295688 TSG101Q99816 390 aa16.45■□□□□ 0.22
CCT3-201ENST00000295688 GOLGA6AQ9NYA3 693 aa16.45■□□□□ 0.22
CCT3-201ENST00000295688 ARHGAP20Q9P2F6 1191 aa16.45■□□□□ 0.22
CCT3-201ENST00000295688 SPATA31A1Q5TZJ5 1347 aa16.45■□□□□ 0.22
CCT3-201ENST00000295688 COL16A1Q07092 1604 aaPredicted RBP16.45■□□□□ 0.22
CCT3-201ENST00000295688 STRCQ7RTU9 1775 aa16.45■□□□□ 0.22
CCT3-201ENST00000295688 TNFRSF8P28908 595 aa16.45■□□□□ 0.22
CCT3-201ENST00000295688 MAGEA1P43355 309 aa16.45■□□□□ 0.22
CCT3-201ENST00000295688 EPHB4P54760 987 aa16.45■□□□□ 0.22
CCT3-201ENST00000295688 DNAJC21Q5F1R6 531 aaKnown RBP16.45■□□□□ 0.22
CCT3-201ENST00000295688 EMBQ6PCB8 327 aa16.45■□□□□ 0.22
CCT3-201ENST00000295688 SPATA4Q8NEY3 305 aa16.45■□□□□ 0.22
CCT3-201ENST00000295688 CDK5RAP3Q96JB5 506 aa16.45■□□□□ 0.22
CCT3-201ENST00000295688 OSBPL9Q96SU4 736 aa16.45■□□□□ 0.22
CCT3-201ENST00000295688 RIC8AQ9NPQ8 531 aa16.45■□□□□ 0.22
CCT3-201ENST00000295688 LUC7LQ9NQ29 371 aaKnown RBP16.45■□□□□ 0.22
CCT3-201ENST00000295688 NAV1Q8NEY1 1877 aa16.45■□□□□ 0.22
CCT3-201ENST00000295688 SSU72P8A0A1W2PR75 194 aa16.44■□□□□ 0.22
CCT3-201ENST00000295688 AGPSO00116 658 aa16.44■□□□□ 0.22
CCT3-201ENST00000295688 ZMYND10O75800 440 aa16.44■□□□□ 0.22
CCT3-201ENST00000295688 CLSTN1O94985 981 aa16.44■□□□□ 0.22
CCT3-201ENST00000295688 EIF4A3P38919 411 aaKnown RBP16.44■□□□□ 0.22
CCT3-201ENST00000295688 FXR2P51116 673 aaKnown RBP eCLIP16.44■□□□□ 0.223e-6■■□□□ 12.3
CCT3-201ENST00000295688 PPFIA1Q13136 1202 aa16.44■□□□□ 0.22
CCT3-201ENST00000295688 ALS2CLQ60I27 953 aa16.44■□□□□ 0.22
CCT3-201ENST00000295688 SH3RF3Q8TEJ3 882 aaPredicted RBP16.44■□□□□ 0.22
CCT3-201ENST00000295688 MMTAG2Q9BU76 263 aaKnown RBP16.44■□□□□ 0.22
CCT3-201ENST00000295688 MMRN2Q9H8L6 949 aa16.44■□□□□ 0.22
CCT3-201ENST00000295688 SLC39A2Q9NP94 309 aa16.44■□□□□ 0.22
CCT3-201ENST00000295688 RASA1P20936 1047 aa16.44■□□□□ 0.22
CCT3-201ENST00000295688 MAPK8IP2Q13387 824 aaPredicted RBP16.44■□□□□ 0.22
CCT3-201ENST00000295688 PDIA5Q14554 519 aa16.44■□□□□ 0.22
CCT3-201ENST00000295688 BICDL1Q6ZP65 573 aa16.44■□□□□ 0.22
CCT3-201ENST00000295688 KRT26Q7Z3Y9 468 aa16.44■□□□□ 0.22
CCT3-201ENST00000295688 TBCKQ8TEA7 893 aa16.44■□□□□ 0.22
CCT3-201ENST00000295688 SETDB2Q96T68 719 aa16.44■□□□□ 0.22
CCT3-201ENST00000295688 MOCS3O95396 460 aa16.43■□□□□ 0.22
CCT3-201ENST00000295688 MYBL2P10244 700 aa16.43■□□□□ 0.22
CCT3-201ENST00000295688 NNTQ13423 1086 aa16.43■□□□□ 0.22
CCT3-201ENST00000295688 SLC4A8Q2Y0W8 1093 aa16.43■□□□□ 0.22
CCT3-201ENST00000295688 TBC1D9BQ66K14 1250 aa16.43■□□□□ 0.22
CCT3-201ENST00000295688 SND1Q7KZF4 910 aaKnown RBP eCLIP16.43■□□□□ 0.222e-8■□□□□ 11.2
CCT3-201ENST00000295688 REXO1Q8N1G1 1221 aaKnown RBP16.43■□□□□ 0.22
CCT3-201ENST00000295688 PROM2Q8N271 834 aa16.43■□□□□ 0.22
CCT3-201ENST00000295688 NEDD1Q8NHV4 660 aa16.43■□□□□ 0.22
CCT3-201ENST00000295688 PPM1EQ8WY54 764 aa16.43■□□□□ 0.22
CCT3-201ENST00000295688 LARP4BQ92615 738 aaKnown RBP16.43■□□□□ 0.22
CCT3-201ENST00000295688 CAPN6Q9Y6Q1 641 aa16.43■□□□□ 0.22
CCT3-201ENST00000295688 GRB10Q13322 594 aa16.43■□□□□ 0.22
CCT3-201ENST00000295688 SEPT2Q15019 361 aa16.43■□□□□ 0.22
CCT3-201ENST00000295688 TPTE2Q6XPS3 522 aa16.43■□□□□ 0.22
CCT3-201ENST00000295688 RRAGAQ7L523 313 aa16.43■□□□□ 0.22
CCT3-201ENST00000295688 CACNA2D4Q7Z3S7 1137 aa16.43■□□□□ 0.22
CCT3-201ENST00000295688 EEF2KMTQ96G04 330 aa16.43■□□□□ 0.22
CCT3-201ENST00000295688 NOX5Q96PH1 765 aa16.43■□□□□ 0.22
CCT3-201ENST00000295688 LRRC1Q9BTT6 524 aa16.43■□□□□ 0.22
CCT3-201ENST00000295688 YY1AP1Q9H869 796 aa16.43■□□□□ 0.22
CCT3-201ENST00000295688 FAM207AQ9NSI2 230 aaPredicted RBP16.43■□□□□ 0.22
CCT3-201ENST00000295688 LEMD3Q9Y2U8 911 aa16.43■□□□□ 0.22
CCT3-201ENST00000295688 CNTNAP4Q9C0A0 1308 aa16.42■□□□□ 0.22
CCT3-201ENST00000295688 IRS2Q9Y4H2 1338 aa16.42■□□□□ 0.22
CCT3-201ENST00000295688 MYMKA6NI61 221 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms