RNA–Protein interactions for RNA: ENST00000292779.3

CCDC116-201, Transcript of coiled-coil domain containing 116, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC116, Length 2,260 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116-201ENST00000292779 SUGT1Q9Y2Z0 365 aa16.85■□□□□ 0.29
CCDC116-201ENST00000292779 SLC37A4O43826 429 aa16.84■□□□□ 0.29
CCDC116-201ENST00000292779 EDIL3O43854 480 aa16.84■□□□□ 0.29
CCDC116-201ENST00000292779 TDP2O95551 362 aa16.84■□□□□ 0.29
CCDC116-201ENST00000292779 TBC1D8O95759 1140 aa16.84■□□□□ 0.29
CCDC116-201ENST00000292779 TFRCP02786 760 aaKnown RBP16.84■□□□□ 0.29
CCDC116-201ENST00000292779 PTGER2P43116 358 aa16.84■□□□□ 0.29
CCDC116-201ENST00000292779 TUBB2AQ13885 445 aa16.84■□□□□ 0.29
CCDC116-201ENST00000292779 KIAA0895Q8NCT3 520 aa16.84■□□□□ 0.29
CCDC116-201ENST00000292779 TUBB2BQ9BVA1 445 aa16.84■□□□□ 0.29
CCDC116-201ENST00000292779 TRIM10Q9UDY6 481 aa16.84■□□□□ 0.29
CCDC116-201ENST00000292779 LRWD1Q9UFC0 647 aa16.84■□□□□ 0.29
CCDC116-201ENST00000292779 BRCA1P38398 1863 aaKnown RBP16.84■□□□□ 0.29
CCDC116-201ENST00000292779 IGKV6D-41A0A0C4DH26 115 aa16.84■□□□□ 0.29
CCDC116-201ENST00000292779 SNHG28P0DPA3 235 aa16.84■□□□□ 0.29
CCDC116-201ENST00000292779 KLK7P49862 253 aa16.84■□□□□ 0.29
CCDC116-201ENST00000292779 CNNM4Q6P4Q7 775 aa16.84■□□□□ 0.29
CCDC116-201ENST00000292779 ZNF771Q7L3S4 317 aaPredicted RBP16.84■□□□□ 0.29
CCDC116-201ENST00000292779 BLOC1S4Q9NUP1 217 aa16.84■□□□□ 0.29
CCDC116-201ENST00000292779 USP40Q9NVE5 1235 aa16.84■□□□□ 0.29
CCDC116-201ENST00000292779 SERPINB13Q9UIV8 391 aa16.84■□□□□ 0.29
CCDC116-201ENST00000292779 RASSF10A6NK89 507 aa16.83■□□□□ 0.28
CCDC116-201ENST00000292779 ATP8B1O43520 1251 aa16.83■□□□□ 0.28
CCDC116-201ENST00000292779 SASH3O75995 380 aa16.83■□□□□ 0.28
CCDC116-201ENST00000292779 FXR2P51116 673 aaKnown RBP eCLIP16.83■□□□□ 0.28
CCDC116-201ENST00000292779 TBC1D8BQ0IIM8 1120 aa16.83■□□□□ 0.28
CCDC116-201ENST00000292779 MCM6Q14566 821 aa16.83■□□□□ 0.28
CCDC116-201ENST00000292779 TSR1Q2NL82 804 aaKnown RBP16.83■□□□□ 0.28
CCDC116-201ENST00000292779 SV2BQ7L1I2 683 aa16.83■□□□□ 0.28
CCDC116-201ENST00000292779 FAM114A1Q8IWE2 563 aa16.83■□□□□ 0.28
CCDC116-201ENST00000292779 PNMA5Q96PV4 448 aa16.83■□□□□ 0.28
CCDC116-201ENST00000292779 TTYH3Q9C0H2 523 aa16.83■□□□□ 0.28
CCDC116-201ENST00000292779 ARFGAP3Q9NP61 516 aa16.83■□□□□ 0.28
CCDC116-201ENST00000292779 SLC39A2Q9NP94 309 aa16.83■□□□□ 0.28
CCDC116-201ENST00000292779 AGPAT5Q9NUQ2 364 aa16.83■□□□□ 0.28
CCDC116-201ENST00000292779 PPP1R1BQ9UD71 204 aaPredicted RBP16.83■□□□□ 0.28
CCDC116-201ENST00000292779 GUCA1BQ9UMX6 200 aa16.83■□□□□ 0.28
CCDC116-201ENST00000292779 ZNF646O15015 1829 aaPredicted RBP16.82■□□□□ 0.28
CCDC116-201ENST00000292779 TTLL1O95922 423 aa16.82■□□□□ 0.28
CCDC116-201ENST00000292779 TRIM21P19474 475 aaKnown RBP16.82■□□□□ 0.28
CCDC116-201ENST00000292779 PPP1R2P41236 205 aa16.82■□□□□ 0.28
CCDC116-201ENST00000292779 MTIF2P46199 727 aaKnown RBP16.82■□□□□ 0.28
CCDC116-201ENST00000292779 MIIPQ5JXC2 388 aa16.82■□□□□ 0.28
CCDC116-201ENST00000292779 SEMA6BQ9H3T3 888 aa16.82■□□□□ 0.28
CCDC116-201ENST00000292779 ADAMTSL1Q8N6G6 1762 aa16.82■□□□□ 0.28
CCDC116-201ENST00000292779 MYH4Q9Y623 1939 aa16.82■□□□□ 0.28
CCDC116-201ENST00000292779 MYMKA6NI61 221 aa16.82■□□□□ 0.28
CCDC116-201ENST00000292779 NKRFO15226 690 aaKnown RBP eCLIP16.82■□□□□ 0.28
CCDC116-201ENST00000292779 HERVK_113P62684 666 aa16.82■□□□□ 0.28
CCDC116-201ENST00000292779 TMEM266Q2M3C6 531 aa16.82■□□□□ 0.28
CCDC116-201ENST00000292779 ADGRF4Q8IZF3 695 aa16.82■□□□□ 0.28
CCDC116-201ENST00000292779 CNKSR1Q969H4 720 aa16.82■□□□□ 0.28
CCDC116-201ENST00000292779 PKNOX2Q96KN3 472 aa16.82■□□□□ 0.28
CCDC116-201ENST00000292779 NOC4LQ9BVI4 516 aaKnown RBP16.82■□□□□ 0.28
CCDC116-201ENST00000292779 ANKZF1Q9H8Y5 726 aa16.82■□□□□ 0.28
CCDC116-201ENST00000292779 JMJD4Q9H9V9 463 aa16.82■□□□□ 0.28
CCDC116-201ENST00000292779 MYH7BA7E2Y1 1941 aa16.82■□□□□ 0.28
CCDC116-201ENST00000292779 POTEMA6NI47 508 aa16.81■□□□□ 0.28
CCDC116-201ENST00000292779 KIF20AO95235 890 aa16.81■□□□□ 0.28
CCDC116-201ENST00000292779 SLURP2P0DP57 97 aa16.81■□□□□ 0.28
CCDC116-201ENST00000292779 SHMT1P34896 483 aa16.81■□□□□ 0.28
CCDC116-201ENST00000292779 ZNF543Q08ER8 600 aa16.81■□□□□ 0.28
CCDC116-201ENST00000292779 MEA1Q16626 185 aa16.81■□□□□ 0.28
CCDC116-201ENST00000292779 COBLL1Q53SF7 1204 aa16.81■□□□□ 0.28
CCDC116-201ENST00000292779 CDC42EP5Q6NZY7 148 aa16.81■□□□□ 0.28
CCDC116-201ENST00000292779 CDK5RAP3Q96JB5 506 aa16.81■□□□□ 0.28
CCDC116-201ENST00000292779 NUP58Q9BVL2 599 aa16.81■□□□□ 0.28
CCDC116-201ENST00000292779 DBNDD1Q9H9R9 158 aa16.81■□□□□ 0.28
CCDC116-201ENST00000292779 STK17AQ9UEE5 414 aa16.81■□□□□ 0.28
CCDC116-201ENST00000292779 TFR2Q9UP52 801 aa16.81■□□□□ 0.28
CCDC116-201ENST00000292779 COL4A5P29400 1685 aa16.81■□□□□ 0.28
CCDC116-201ENST00000292779 PNMA6FA0A0J9YX94 578 aa16.81■□□□□ 0.28
CCDC116-201ENST00000292779 PPP1R11O60927 126 aaPredicted RBP16.81■□□□□ 0.28
CCDC116-201ENST00000292779 TNNI2P48788 182 aa16.81■□□□□ 0.28
CCDC116-201ENST00000292779 UBE2SQ16763 222 aa16.81■□□□□ 0.28
CCDC116-201ENST00000292779 TTBK2Q6IQ55 1244 aa16.81■□□□□ 0.28
CCDC116-201ENST00000292779 DYMQ7RTS9 669 aa16.81■□□□□ 0.28
CCDC116-201ENST00000292779 LARP4BQ92615 738 aaKnown RBP16.81■□□□□ 0.28
CCDC116-201ENST00000292779 SWAP70Q9UH65 585 aa16.81■□□□□ 0.28
CCDC116-201ENST00000292779 AMPD2Q01433 879 aa16.8■□□□□ 0.28
CCDC116-201ENST00000292779 NFIAQ12857 509 aa16.8■□□□□ 0.28
CCDC116-201ENST00000292779 WHAMMP3Q1A5X7 153 aa16.8■□□□□ 0.28
CCDC116-201ENST00000292779 CENPPQ6IPU0 288 aa16.8■□□□□ 0.28
CCDC116-201ENST00000292779 APOBEC3HQ6NTF7 200 aaKnown RBP16.8■□□□□ 0.28
CCDC116-201ENST00000292779 UNC13DQ70J99 1090 aa16.8■□□□□ 0.28
CCDC116-201ENST00000292779 ZSCAN29Q8IWY8 852 aaPredicted RBP16.8■□□□□ 0.28
CCDC116-201ENST00000292779 RETREG2Q8NC44 543 aa16.8■□□□□ 0.28
CCDC116-201ENST00000292779 PCMTD1Q96MG8 357 aaPredicted RBP16.8■□□□□ 0.28
CCDC116-201ENST00000292779 NUDT12Q9BQG2 462 aa16.8■□□□□ 0.28
CCDC116-201ENST00000292779 HAUS4Q9H6D7 363 aa16.8■□□□□ 0.28
CCDC116-201ENST00000292779 RIC8AQ9NPQ8 531 aa16.8■□□□□ 0.28
CCDC116-201ENST00000292779 CCDC151A5D8V7 595 aa16.8■□□□□ 0.28
CCDC116-201ENST00000292779 MPHOSPH10O00566 681 aaKnown RBP16.8■□□□□ 0.28
CCDC116-201ENST00000292779 ZBED6P86452 979 aa16.8■□□□□ 0.28
CCDC116-201ENST00000292779 PDIA5Q14554 519 aa16.8■□□□□ 0.28
CCDC116-201ENST00000292779 TTLL6Q8N841 843 aa16.8■□□□□ 0.28
CCDC116-201ENST00000292779 SNX29Q8TEQ0 813 aa16.8■□□□□ 0.28
CCDC116-201ENST00000292779 FUT8Q9BYC5 575 aa16.8■□□□□ 0.28
CCDC116-201ENST00000292779 RAB34Q9BZG1 259 aa16.8■□□□□ 0.28
CCDC116-201ENST00000292779 MYO6Q9UM54 1294 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms