RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 SFI1A8K8P3 1242 aa17.62■□□□□ 0.41
SMAD6-201ENST00000288840 RASA1P20936 1047 aa17.62■□□□□ 0.41
SMAD6-201ENST00000288840 RCAN1P53805 252 aa17.62■□□□□ 0.41
SMAD6-201ENST00000288840 KLHL30Q0D2K2 578 aa17.62■□□□□ 0.41
SMAD6-201ENST00000288840 ZNF384Q8TF68 577 aa17.62■□□□□ 0.41
SMAD6-201ENST00000288840 MTA3Q9BTC8 594 aa17.62■□□□□ 0.41
SMAD6-201ENST00000288840 EHD2Q9NZN4 543 aa17.62■□□□□ 0.41
SMAD6-201ENST00000288840 TNS2Q63HR2 1409 aa17.62■□□□□ 0.41
SMAD6-201ENST00000288840 E9PMD0 336 aa17.62■□□□□ 0.41
SMAD6-201ENST00000288840 CYTH3O43739 400 aa17.62■□□□□ 0.41
SMAD6-201ENST00000288840 CFBP00751 764 aa17.62■□□□□ 0.41
SMAD6-201ENST00000288840 AKR1B1P15121 316 aa17.62■□□□□ 0.41
SMAD6-201ENST00000288840 EHHADHQ08426 723 aa17.62■□□□□ 0.41
SMAD6-201ENST00000288840 PDXDC2PQ6P474 469 aa17.62■□□□□ 0.41
SMAD6-201ENST00000288840 DHTKD1Q96HY7 919 aaPredicted RBP17.62■□□□□ 0.41
SMAD6-201ENST00000288840 LIMA1Q9UHB6 759 aaKnown RBP17.62■□□□□ 0.41
SMAD6-201ENST00000288840 LEMD3Q9Y2U8 911 aa17.62■□□□□ 0.41
SMAD6-201ENST00000288840 CUL5Q93034 780 aa17.61■□□□□ 0.41
SMAD6-201ENST00000288840 MTRQ99707 1265 aa17.61■□□□□ 0.41
SMAD6-201ENST00000288840 LZTS2Q9BRK4 669 aa17.61■□□□□ 0.41
SMAD6-201ENST00000288840 LACRTQ9GZZ8 138 aa17.61■□□□□ 0.41
SMAD6-201ENST00000288840 MAD2L2Q9UI95 211 aa17.61■□□□□ 0.41
SMAD6-201ENST00000288840 PACSIN2Q9UNF0 486 aaPredicted RBP17.61■□□□□ 0.41
SMAD6-201ENST00000288840 MRC1P22897 1456 aa17.61■□□□□ 0.41
SMAD6-201ENST00000288840 GOLGA6BA6NDN3 693 aa17.61■□□□□ 0.41
SMAD6-201ENST00000288840 ATP2C2O75185 946 aa17.61■□□□□ 0.41
SMAD6-201ENST00000288840 ATP1A2P50993 1020 aa17.61■□□□□ 0.41
SMAD6-201ENST00000288840 LLGL1Q15334 1064 aa17.61■□□□□ 0.41
SMAD6-201ENST00000288840 SLC9C1Q4G0N8 1177 aa17.61■□□□□ 0.41
SMAD6-201ENST00000288840 RCSD1Q6JBY9 416 aa17.61■□□□□ 0.41
SMAD6-201ENST00000288840 NPHP3-ACAD11A0A0J9YXS1 232 aa17.61■□□□□ 0.41
SMAD6-201ENST00000288840 TMEM110-MUSTN1A8MSY1 372 aa17.61■□□□□ 0.41
SMAD6-201ENST00000288840 STAT3P40763 770 aa17.61■□□□□ 0.41
SMAD6-201ENST00000288840 GFPT1Q06210 699 aaPredicted RBP17.61■□□□□ 0.41
SMAD6-201ENST00000288840 AFAP1L1Q8TED9 768 aa17.61■□□□□ 0.41
SMAD6-201ENST00000288840 USP17L10C9JJH3 530 aa17.6■□□□□ 0.41
SMAD6-201ENST00000288840 STXBP3O00186 592 aa17.6■□□□□ 0.41
SMAD6-201ENST00000288840 HSF2BPO75031 334 aa17.6■□□□□ 0.41
SMAD6-201ENST00000288840 HPDP32754 393 aaPredicted RBP17.6■□□□□ 0.41
SMAD6-201ENST00000288840 ZBED6P86452 979 aa17.6■□□□□ 0.41
SMAD6-201ENST00000288840 CDKAL1Q5VV42 579 aa17.6■□□□□ 0.41
SMAD6-201ENST00000288840 FNBP4Q8N3X1 1017 aaPredicted RBP17.6■□□□□ 0.41
SMAD6-201ENST00000288840 CCDC113Q9H0I3 377 aa17.6■□□□□ 0.41
SMAD6-201ENST00000288840 ADAMTS1Q9UHI8 967 aa17.6■□□□□ 0.41
SMAD6-201ENST00000288840 SMIM23A6NLE4 172 aa17.6■□□□□ 0.41
SMAD6-201ENST00000288840 KIF11P52732 1056 aa17.6■□□□□ 0.41
SMAD6-201ENST00000288840 KIAA0753Q2KHM9 967 aa17.6■□□□□ 0.41
SMAD6-201ENST00000288840 NFRKBQ6P4R8 1299 aa17.6■□□□□ 0.41
SMAD6-201ENST00000288840 PROCA1Q8NCQ7 364 aaPredicted RBP17.6■□□□□ 0.41
SMAD6-201ENST00000288840 SERPINB13Q9UIV8 391 aa17.6■□□□□ 0.41
SMAD6-201ENST00000288840 ESYT3A0FGR9 886 aa17.6■□□□□ 0.41
SMAD6-201ENST00000288840 LRRC53A6NM62 1247 aa17.6■□□□□ 0.41
SMAD6-201ENST00000288840 CLIC2O15247 247 aa17.6■□□□□ 0.41
SMAD6-201ENST00000288840 FANCGO15287 622 aa17.6■□□□□ 0.41
SMAD6-201ENST00000288840 HOXA13P31271 388 aaPredicted RBP17.6■□□□□ 0.41
SMAD6-201ENST00000288840 FUT2Q10981 343 aa17.6■□□□□ 0.41
SMAD6-201ENST00000288840 CCDC84Q86UT8 332 aaPredicted RBP17.6■□□□□ 0.41
SMAD6-201ENST00000288840 VEZTQ9HBM0 779 aa17.6■□□□□ 0.41
SMAD6-201ENST00000288840 GCNT3O95395 438 aa17.59■□□□□ 0.41
SMAD6-201ENST00000288840 ADAM9Q13443 819 aa17.59■□□□□ 0.41
SMAD6-201ENST00000288840 NT5DC1Q5TFE4 455 aa17.59■□□□□ 0.41
SMAD6-201ENST00000288840 SFMBT2Q5VUG0 894 aa17.59■□□□□ 0.41
SMAD6-201ENST00000288840 FAM133AQ8N9E0 248 aa17.59■□□□□ 0.41
SMAD6-201ENST00000288840 NOX5Q96PH1 765 aa17.59■□□□□ 0.41
SMAD6-201ENST00000288840 THAP9Q9H5L6 903 aa17.59■□□□□ 0.41
SMAD6-201ENST00000288840 FAM237AA0A1B0GTK4 181 aa17.59■□□□□ 0.41
SMAD6-201ENST00000288840 GOLGA6CA6NDK9 693 aa17.59■□□□□ 0.41
SMAD6-201ENST00000288840 CETN3O15182 167 aa17.59■□□□□ 0.41
SMAD6-201ENST00000288840 CEP104O60308 925 aa17.59■□□□□ 0.41
SMAD6-201ENST00000288840 RNF40O75150 1001 aa17.59■□□□□ 0.41
SMAD6-201ENST00000288840 GOLGA6DP0CG33 693 aa17.59■□□□□ 0.41
SMAD6-201ENST00000288840 DNAAF5Q86Y56 855 aa17.59■□□□□ 0.41
SMAD6-201ENST00000288840 TBC1D5Q92609 795 aa17.59■□□□□ 0.41
SMAD6-201ENST00000288840 GOLGA6AQ9NYA3 693 aa17.59■□□□□ 0.41
SMAD6-201ENST00000288840 RNF187Q5TA31 235 aaPredicted RBP17.59■□□□□ 0.41
SMAD6-201ENST00000288840 NAA35Q5VZE5 725 aa17.59■□□□□ 0.41
SMAD6-201ENST00000288840 TPH2Q8IWU9 490 aa17.59■□□□□ 0.41
SMAD6-201ENST00000288840 KIFC2Q96AC6 838 aa17.59■□□□□ 0.41
SMAD6-201ENST00000288840 MYMKA6NI61 221 aa17.58■□□□□ 0.41
SMAD6-201ENST00000288840 ABCB4P21439 1286 aa17.58■□□□□ 0.41
SMAD6-201ENST00000288840 VAV2P52735 878 aa17.58■□□□□ 0.41
SMAD6-201ENST00000288840 CCDC174Q6PII3 467 aa17.58■□□□□ 0.41
SMAD6-201ENST00000288840 TAX1BP1Q86VP1 789 aa17.58■□□□□ 0.41
SMAD6-201ENST00000288840 FAM76AQ8TAV0 307 aa17.58■□□□□ 0.41
SMAD6-201ENST00000288840 LRRC27Q9C0I9 530 aa17.58■□□□□ 0.41
SMAD6-201ENST00000288840 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.58■□□□□ 0.41
SMAD6-201ENST00000288840 TRIM37O94972 964 aa17.58■□□□□ 0.4
SMAD6-201ENST00000288840 BCS1LQ9Y276 419 aa17.58■□□□□ 0.4
SMAD6-201ENST00000288840 PCDHA13Q9Y5I0 950 aa17.58■□□□□ 0.4
SMAD6-201ENST00000288840 POTEB3A0JP26 581 aa17.58■□□□□ 0.4
SMAD6-201ENST00000288840 POTECB2RU33 542 aa17.58■□□□□ 0.4
SMAD6-201ENST00000288840 SP4Q02446 784 aa17.58■□□□□ 0.4
SMAD6-201ENST00000288840 POTEBQ6S5H4 581 aa17.58■□□□□ 0.4
SMAD6-201ENST00000288840 VPS36Q86VN1 386 aa17.58■□□□□ 0.4
SMAD6-201ENST00000288840 FUT8Q9BYC5 575 aa17.58■□□□□ 0.4
SMAD6-201ENST00000288840 H3BQF6 201 aa17.57■□□□□ 0.4
SMAD6-201ENST00000288840 PPP1R12BO60237 982 aaPredicted RBP17.57■□□□□ 0.4
SMAD6-201ENST00000288840 TAL1P17542 331 aaPredicted RBP17.57■□□□□ 0.4
SMAD6-201ENST00000288840 ATP2B4P23634 1241 aa17.57■□□□□ 0.4
SMAD6-201ENST00000288840 VWA3BQ502W6 1294 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms