RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 TRIM47Q96LD4 638 aa11.53□□□□□ -0.56
SKA1-201ENST00000285116 EDEM3Q9BZQ6 932 aa11.53□□□□□ -0.56
SKA1-201ENST00000285116 ZMYND12Q9H0C1 365 aa11.53□□□□□ -0.56
SKA1-201ENST00000285116 KIF13BQ9NQT8 1826 aa11.53□□□□□ -0.56
SKA1-201ENST00000285116 PALM3A6NDB9 673 aaPredicted RBP11.53□□□□□ -0.56
SKA1-201ENST00000285116 TRIM49BA6NDI0 452 aa11.53□□□□□ -0.56
SKA1-201ENST00000285116 GOLGA8KD6RF30 607 aa11.53□□□□□ -0.56
SKA1-201ENST00000285116 NMT2O60551 498 aa11.53□□□□□ -0.56
SKA1-201ENST00000285116 APBA3O96018 575 aa11.53□□□□□ -0.56
SKA1-201ENST00000285116 UBA7P41226 1012 aa11.53□□□□□ -0.56
SKA1-201ENST00000285116 SETQ01105 290 aaPredicted RBP11.53□□□□□ -0.56
SKA1-201ENST00000285116 KCNV1Q6PIU1 500 aa11.53□□□□□ -0.56
SKA1-201ENST00000285116 KRT25Q7Z3Z0 450 aa11.53□□□□□ -0.56
SKA1-201ENST00000285116 PNMA1Q8ND90 353 aa11.53□□□□□ -0.56
SKA1-201ENST00000285116 NHEJ1Q9H9Q4 299 aaPredicted RBP11.53□□□□□ -0.56
SKA1-201ENST00000285116 IL17RBQ9NRM6 502 aa11.53□□□□□ -0.56
SKA1-201ENST00000285116 CCNL1Q9UK58 526 aaPredicted RBP11.53□□□□□ -0.56
SKA1-201ENST00000285116 C10orf71Q711Q0 1435 aa11.53□□□□□ -0.56
SKA1-201ENST00000285116 TSPY2A6NKD2 308 aa11.53□□□□□ -0.56
SKA1-201ENST00000285116 VEGFAP15692 232 aaPredicted RBP11.53□□□□□ -0.56
SKA1-201ENST00000285116 ERFEQ4G0M1 354 aa11.53□□□□□ -0.56
SKA1-201ENST00000285116 CCDC70Q6NSX1 233 aa11.53□□□□□ -0.56
SKA1-201ENST00000285116 CCDC155Q8N6L0 562 aa11.53□□□□□ -0.56
SKA1-201ENST00000285116 TACO1Q9BSH4 297 aaKnown RBP11.53□□□□□ -0.56
SKA1-201ENST00000285116 TRIM9Q9C026 710 aa11.53□□□□□ -0.56
SKA1-201ENST00000285116 TMEM60Q9H2L4 133 aa11.53□□□□□ -0.56
SKA1-201ENST00000285116 FAM184BQ9ULE4 1060 aa11.53□□□□□ -0.56
SKA1-201ENST00000285116 CEP83Q9Y592 693 aa11.53□□□□□ -0.56
SKA1-201ENST00000285116 PPP4CP60510 307 aa11.52□□□□□ -0.57
SKA1-201ENST00000285116 AMPD3Q01432 767 aa11.52□□□□□ -0.57
SKA1-201ENST00000285116 FBXW10Q5XX13 1052 aa11.52□□□□□ -0.57
SKA1-201ENST00000285116 TYW1BQ6NUM6 668 aa11.52□□□□□ -0.57
SKA1-201ENST00000285116 B4GALNT4Q76KP1 1039 aa11.52□□□□□ -0.57
SKA1-201ENST00000285116 CSGALNACT2Q8N6G5 542 aa11.52□□□□□ -0.57
SKA1-201ENST00000285116 PRPF38AQ8NAV1 312 aaKnown RBP11.52□□□□□ -0.57
SKA1-201ENST00000285116 TRIM58Q8NG06 486 aa11.52□□□□□ -0.57
SKA1-201ENST00000285116 A1CFQ9NQ94 594 aaKnown RBP11.52□□□□□ -0.57
SKA1-201ENST00000285116 DONSONQ9NYP3 566 aa11.52□□□□□ -0.57
SKA1-201ENST00000285116 HDAC6Q9UBN7 1215 aa11.52□□□□□ -0.57
SKA1-201ENST00000285116 TRIM10Q9UDY6 481 aa11.52□□□□□ -0.57
SKA1-201ENST00000285116 PLAGL2Q9UPG8 496 aa11.52□□□□□ -0.57
SKA1-201ENST00000285116 GRIN2DO15399 1336 aa11.52□□□□□ -0.57
SKA1-201ENST00000285116 ESYT2A0FGR8 921 aa11.52□□□□□ -0.57
SKA1-201ENST00000285116 hCG_1984214I3L0E3 225 aa11.52□□□□□ -0.57
SKA1-201ENST00000285116 ENC1O14682 589 aa11.52□□□□□ -0.57
SKA1-201ENST00000285116 KIF1CO43896 1103 aaKnown RBP11.52□□□□□ -0.57
SKA1-201ENST00000285116 IPO7O95373 1038 aaKnown RBP11.52□□□□□ -0.57
SKA1-201ENST00000285116 HIBADHP31937 336 aaKnown RBP11.52□□□□□ -0.57
SKA1-201ENST00000285116 NOVP48745 357 aa11.52□□□□□ -0.57
SKA1-201ENST00000285116 GNGT1P63211 74 aa11.52□□□□□ -0.57
SKA1-201ENST00000285116 VPS72Q15906 364 aa11.52□□□□□ -0.57
SKA1-201ENST00000285116 FAM47AQ5JRC9 791 aa11.52□□□□□ -0.57
SKA1-201ENST00000285116 CENPPQ6IPU0 288 aa11.52□□□□□ -0.57
SKA1-201ENST00000285116 C3orf67Q6ZVT6 689 aa11.52□□□□□ -0.57
SKA1-201ENST00000285116 KIAA1328Q86T90 577 aa11.52□□□□□ -0.57
SKA1-201ENST00000285116 SPATS2Q86XZ4 545 aaKnown RBP11.52□□□□□ -0.57
SKA1-201ENST00000285116 AMOTL1Q8IY63 956 aa11.52□□□□□ -0.57
SKA1-201ENST00000285116 ZNF713Q8N859 430 aaPredicted RBP11.52□□□□□ -0.57
SKA1-201ENST00000285116 AENQ8WTP8 325 aaKnown RBP11.52□□□□□ -0.57
SKA1-201ENST00000285116 SH3GL2Q99962 352 aa11.52□□□□□ -0.57
SKA1-201ENST00000285116 CNTNAP4Q9C0A0 1308 aa11.51□□□□□ -0.57
SKA1-201ENST00000285116 PVALEFA0A1B0GWK0 134 aa11.51□□□□□ -0.57
SKA1-201ENST00000285116 B4DLN1 442 aa11.51□□□□□ -0.57
SKA1-201ENST00000285116 CLGNO14967 610 aa11.51□□□□□ -0.57
SKA1-201ENST00000285116 PJA2O43164 708 aa11.51□□□□□ -0.57
SKA1-201ENST00000285116 OPA1O60313 960 aa11.51□□□□□ -0.57
SKA1-201ENST00000285116 OR52Z1P0C646 297 aa11.51□□□□□ -0.57
SKA1-201ENST00000285116 SLC35G1Q2M3R5 365 aa11.51□□□□□ -0.57
SKA1-201ENST00000285116 FAM196AQ6ZSG2 479 aa11.51□□□□□ -0.57
SKA1-201ENST00000285116 LRRC15Q8TF66 581 aa11.51□□□□□ -0.57
SKA1-201ENST00000285116 CNOT6LQ96LI5 555 aaKnown RBP11.51□□□□□ -0.57
SKA1-201ENST00000285116 GDAP1L1Q96MZ0 367 aa11.51□□□□□ -0.57
SKA1-201ENST00000285116 STK17AQ9UEE5 414 aa11.51□□□□□ -0.57
SKA1-201ENST00000285116 TRPC5Q9UL62 973 aaPredicted RBP11.51□□□□□ -0.57
SKA1-201ENST00000285116 COBLO75128 1261 aa11.51□□□□□ -0.57
SKA1-201ENST00000285116 KRT27Q7Z3Y8 459 aa11.51□□□□□ -0.57
SKA1-201ENST00000285116 CABP7Q86V35 215 aa11.51□□□□□ -0.57
SKA1-201ENST00000285116 CAGE1Q8TC20 777 aa11.51□□□□□ -0.57
SKA1-201ENST00000285116 NYXQ9GZU5 481 aa11.51□□□□□ -0.57
SKA1-201ENST00000285116 SNX12Q9UMY4 172 aa11.51□□□□□ -0.57
SKA1-201ENST00000285116 SIK3Q9Y2K2 1263 aa11.51□□□□□ -0.57
SKA1-201ENST00000285116 MYBL2P10244 700 aa11.5□□□□□ -0.57
SKA1-201ENST00000285116 DDR1Q08345 913 aa11.5□□□□□ -0.57
SKA1-201ENST00000285116 TBC1D8BQ0IIM8 1120 aa11.5□□□□□ -0.57
SKA1-201ENST00000285116 ANKRD40Q6AI12 368 aa11.5□□□□□ -0.57
SKA1-201ENST00000285116 CABS1Q96KC9 395 aa11.5□□□□□ -0.57
SKA1-201ENST00000285116 SH2D4AQ9H788 454 aa11.5□□□□□ -0.57
SKA1-201ENST00000285116 AGPAT5Q9NUQ2 364 aa11.5□□□□□ -0.57
SKA1-201ENST00000285116 RCCD1A6NED2 376 aa11.5□□□□□ -0.57
SKA1-201ENST00000285116 CYTH3O43739 400 aa11.5□□□□□ -0.57
SKA1-201ENST00000285116 SRGAP2O75044 1071 aa11.5□□□□□ -0.57
SKA1-201ENST00000285116 ZMYND10O75800 440 aa11.5□□□□□ -0.57
SKA1-201ENST00000285116 FGFR1OPO95684 399 aaKnown RBP11.5□□□□□ -0.57
SKA1-201ENST00000285116 CYP2D6P10635 497 aa11.5□□□□□ -0.57
SKA1-201ENST00000285116 EPB41P11171 864 aaKnown RBP11.5□□□□□ -0.57
SKA1-201ENST00000285116 PLCG1P19174 1290 aa11.5□□□□□ -0.57
SKA1-201ENST00000285116 TRIM21P19474 475 aaKnown RBP11.5□□□□□ -0.57
SKA1-201ENST00000285116 SKOR1P84550 965 aa11.5□□□□□ -0.57
SKA1-201ENST00000285116 TFAP4Q01664 338 aa11.5□□□□□ -0.57
SKA1-201ENST00000285116 KIF5AQ12840 1032 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms