RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 PHF20Q9BVI0 1012 aa3.19□□□□□ -1.9
CHD1-201ENST00000284049 KCNQ5Q9NR82 932 aa3.19□□□□□ -1.9
CHD1-201ENST00000284049 KRT84Q9NSB2 600 aa3.19□□□□□ -1.9
CHD1-201ENST00000284049 MARK1Q9P0L2 795 aa3.19□□□□□ -1.9
CHD1-201ENST00000284049 BCS1LQ9Y276 419 aa3.19□□□□□ -1.9
CHD1-201ENST00000284049 ST20-MTHFSA0A0A6YYL1 179 aa3.19□□□□□ -1.9
CHD1-201ENST00000284049 A0A1W2PRQ8 180 aa3.19□□□□□ -1.9
CHD1-201ENST00000284049 hCG_1984214I3L0E3 225 aa3.19□□□□□ -1.9
CHD1-201ENST00000284049 PIP5K1CO60331 668 aa3.19□□□□□ -1.9
CHD1-201ENST00000284049 CPP00450 1065 aa3.19□□□□□ -1.9
CHD1-201ENST00000284049 CALD1Q05682 793 aaKnown RBP3.19□□□□□ -1.9
CHD1-201ENST00000284049 STARD3Q14849 445 aa3.19□□□□□ -1.9
CHD1-201ENST00000284049 ZYXQ15942 572 aaKnown RBP3.19□□□□□ -1.9
CHD1-201ENST00000284049 PPP4R3AQ6IN85 833 aa3.19□□□□□ -1.9
CHD1-201ENST00000284049 TOGARAM2Q6ZUX3 1019 aa3.19□□□□□ -1.9
CHD1-201ENST00000284049 GET4Q7L5D6 327 aaPredicted RBP3.19□□□□□ -1.9
CHD1-201ENST00000284049 TXLNBQ8N3L3 684 aa3.19□□□□□ -1.9
CHD1-201ENST00000284049 SLC5A5Q92911 643 aa3.19□□□□□ -1.9
CHD1-201ENST00000284049 BRF1Q92994 677 aa3.19□□□□□ -1.9
CHD1-201ENST00000284049 CHRDQ9H2X0 955 aa3.19□□□□□ -1.9
CHD1-201ENST00000284049 RASAL2Q9UJF2 1139 aa3.19□□□□□ -1.9
CHD1-201ENST00000284049 AP4E1Q9UPM8 1137 aa3.19□□□□□ -1.9
CHD1-201ENST00000284049 TNKSO95271 1327 aa3.19□□□□□ -1.9
CHD1-201ENST00000284049 FAM221AA4D161 298 aa3.19□□□□□ -1.9
CHD1-201ENST00000284049 HSD3B1P14060 373 aa3.19□□□□□ -1.9
CHD1-201ENST00000284049 AP3B2Q13367 1082 aa3.19□□□□□ -1.9
CHD1-201ENST00000284049 HYIQ5T013 277 aa3.19□□□□□ -1.9
CHD1-201ENST00000284049 FAM43BQ6ZT52 329 aaPredicted RBP3.19□□□□□ -1.9
CHD1-201ENST00000284049 FGD2Q7Z6J4 655 aa3.19□□□□□ -1.9
CHD1-201ENST00000284049 ZNF227Q86WZ6 799 aa3.19□□□□□ -1.9
CHD1-201ENST00000284049 PAWRQ96IZ0 340 aaKnown RBP3.19□□□□□ -1.9
CHD1-201ENST00000284049 SP110Q9HB58 689 aa3.19□□□□□ -1.9
CHD1-201ENST00000284049 PNPLA8Q9NP80 782 aa3.19□□□□□ -1.9
CHD1-201ENST00000284049 CTDP1Q9Y5B0 961 aaPredicted RBP3.19□□□□□ -1.9
CHD1-201ENST00000284049 PLCH2O75038 1416 aa3.19□□□□□ -1.9
CHD1-201ENST00000284049 A0A1W2PQJ5 194 aa3.19□□□□□ -1.9
CHD1-201ENST00000284049 ZNF891A8MT65 544 aaPredicted RBP3.19□□□□□ -1.9
CHD1-201ENST00000284049 PRRT4C9JH25 899 aa3.19□□□□□ -1.9
CHD1-201ENST00000284049 PPEF1O14829 653 aaPredicted RBP3.19□□□□□ -1.9
CHD1-201ENST00000284049 ATXN7O15265 892 aaPredicted RBP3.19□□□□□ -1.9
CHD1-201ENST00000284049 APOL3O95236 402 aa3.19□□□□□ -1.9
CHD1-201ENST00000284049 SLC3A2P08195 630 aaKnown RBP3.19□□□□□ -1.9
CHD1-201ENST00000284049 SLC16A1P53985 500 aa3.19□□□□□ -1.9
CHD1-201ENST00000284049 SKOR1P84550 965 aa3.19□□□□□ -1.9
CHD1-201ENST00000284049 DHCR24Q15392 516 aa3.19□□□□□ -1.9
CHD1-201ENST00000284049 SRGAP1Q7Z6B7 1085 aa3.19□□□□□ -1.9
CHD1-201ENST00000284049 PTRH1Q86Y79 214 aaKnown RBP3.19□□□□□ -1.9
CHD1-201ENST00000284049 CLASRPQ8N2M8 674 aaKnown RBP3.19□□□□□ -1.9
CHD1-201ENST00000284049 SLC52A2Q9HAB3 445 aa3.19□□□□□ -1.9
CHD1-201ENST00000284049 VPS45Q9NRW7 570 aa3.19□□□□□ -1.9
CHD1-201ENST00000284049 MRGBPQ9NV56 204 aa3.19□□□□□ -1.9
CHD1-201ENST00000284049 CORO2BQ9UQ03 480 aa3.19□□□□□ -1.9
CHD1-201ENST00000284049 MYO5CQ9NQX4 1742 aa3.19□□□□□ -1.9
CHD1-201ENST00000284049 PRG4Q92954 1404 aaPredicted RBP3.19□□□□□ -1.9
CHD1-201ENST00000284049 SUPT6HQ7KZ85 1726 aaKnown RBP3.18□□□□□ -1.9
CHD1-201ENST00000284049 FAM47E-STBD1D6RA91 191 aa3.18□□□□□ -1.9
CHD1-201ENST00000284049 RNF223E7ERA6 249 aa3.18□□□□□ -1.9
CHD1-201ENST00000284049 DHX16O60231 1041 aaKnown RBP3.18□□□□□ -1.9
CHD1-201ENST00000284049 ZBED4O75132 1171 aa3.18□□□□□ -1.9
CHD1-201ENST00000284049 EVX2Q03828 476 aa3.18□□□□□ -1.9
CHD1-201ENST00000284049 GRB10Q13322 594 aa3.18□□□□□ -1.9
CHD1-201ENST00000284049 TBC1D10BQ4KMP7 808 aaPredicted RBP3.18□□□□□ -1.9
CHD1-201ENST00000284049 FOXB2Q5VYV0 432 aa3.18□□□□□ -1.9
CHD1-201ENST00000284049 THSD4Q6ZMP0 1018 aa3.18□□□□□ -1.9
CHD1-201ENST00000284049 EPM2AIP1Q7L775 607 aaPredicted RBP3.18□□□□□ -1.9
CHD1-201ENST00000284049 CPA6Q8N4T0 437 aa3.18□□□□□ -1.9
CHD1-201ENST00000284049 SLC7A14Q8TBB6 771 aa3.18□□□□□ -1.9
CHD1-201ENST00000284049 CDK15Q96Q40 435 aa3.18□□□□□ -1.9
CHD1-201ENST00000284049 CRB3Q9BUF7 120 aa3.18□□□□□ -1.9
CHD1-201ENST00000284049 UBE2OQ9C0C9 1292 aaKnown RBP3.18□□□□□ -1.9
CHD1-201ENST00000284049 FHDC1Q9C0D6 1143 aaPredicted RBP3.18□□□□□ -1.9
CHD1-201ENST00000284049 GRPEL1Q9HAV7 217 aa3.18□□□□□ -1.9
CHD1-201ENST00000284049 HAUS2Q9NVX0 235 aa3.18□□□□□ -1.9
CHD1-201ENST00000284049 ARHGEF40Q8TER5 1519 aa3.18□□□□□ -1.9
CHD1-201ENST00000284049 ABLIM3O94929 683 aa3.18□□□□□ -1.9
CHD1-201ENST00000284049 F11P03951 625 aa3.18□□□□□ -1.9
CHD1-201ENST00000284049 GPC1P35052 558 aa3.18□□□□□ -1.9
CHD1-201ENST00000284049 ZNF143P52747 638 aaPredicted RBP3.18□□□□□ -1.9
CHD1-201ENST00000284049 NRLP54845 237 aa3.18□□□□□ -1.9
CHD1-201ENST00000284049 GJA9P57773 515 aa3.18□□□□□ -1.9
CHD1-201ENST00000284049 PCBP2Q15366 365 aaKnown RBP eCLIP3.18□□□□□ -1.9
CHD1-201ENST00000284049 ARHGAP44Q17R89 818 aa3.18□□□□□ -1.9
CHD1-201ENST00000284049 GJA10Q969M2 543 aa3.18□□□□□ -1.9
CHD1-201ENST00000284049 SLC6A18Q96N87 628 aa3.18□□□□□ -1.9
CHD1-201ENST00000284049 SLC2A13Q96QE2 648 aa3.18□□□□□ -1.9
CHD1-201ENST00000284049 FAM167BQ9BTA0 163 aa3.18□□□□□ -1.9
CHD1-201ENST00000284049 CYP26B1Q9NR63 512 aa3.18□□□□□ -1.9
CHD1-201ENST00000284049 CFDP1Q9UEE9 299 aaPredicted RBP3.18□□□□□ -1.9
CHD1-201ENST00000284049 CPA4Q9UI42 421 aa3.18□□□□□ -1.9
CHD1-201ENST00000284049 DGKBQ9Y6T7 804 aa3.18□□□□□ -1.9
CHD1-201ENST00000284049 DCDC2CA8MYV0 355 aa3.18□□□□□ -1.9
CHD1-201ENST00000284049 CHURC1-FNTBB4DL54 471 aa3.18□□□□□ -1.9
CHD1-201ENST00000284049 H3BRJ5 948 aa3.18□□□□□ -1.9
CHD1-201ENST00000284049 CLGNO14967 610 aa3.18□□□□□ -1.9
CHD1-201ENST00000284049 NME1P15531 152 aaKnown RBP3.18□□□□□ -1.9
CHD1-201ENST00000284049 GARTP22102 1010 aa3.18□□□□□ -1.9
CHD1-201ENST00000284049 MSL1Q68DK7 614 aa3.18□□□□□ -1.9
CHD1-201ENST00000284049 SAMD9LQ8IVG5 1584 aa3.18□□□□□ -1.9
CHD1-201ENST00000284049 ZNF687Q8N1G0 1237 aa3.18□□□□□ -1.9
CHD1-201ENST00000284049 ATG4CQ96DT6 458 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms