RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 PCDHA12Q9UN75 941 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 FARP1Q9Y4F1 1045 aaPredicted RBP4.42□□□□□ -1.7
SCN3A-201ENST00000283254 UGGT2Q9NYU1 1516 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 PLEKHG2Q9H7P9 1386 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 KLRF2D3W0D1 207 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 SLC27A2O14975 620 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 TTLL1O95922 423 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 PSAPP07602 524 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 JAK3P52333 1124 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 WASHC5Q12768 1159 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 ANKRD20A4Q4UJ75 823 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 ANKRD20A8PQ5CZ79 823 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 ANKRD20A2Q5SQ80 823 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 ANKRD20A1Q5TYW2 823 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 ADALQ6DHV7 355 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 SCYL1Q96KG9 808 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 FGD4Q96M96 766 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 ZBTB18Q99592 522 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 ZBTB40Q9NUA8 1239 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 MLH3Q9UHC1 1453 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 IQCA1LA6NCM1 817 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 INO80B-WBP1J3KQ70 363 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 CHL1O00533 1208 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 CCND2P30279 289 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 NLRP12P59046 1061 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 UBE3CQ15386 1083 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 SYT10Q6XYQ8 523 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 FAM160B2Q86V87 743 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 SESTD1Q86VW0 696 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 VPS16Q9H269 839 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 UBN1Q9NPG3 1134 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 TAB2Q9NYJ8 693 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 ZHX1Q9UKY1 873 aaPredicted RBP4.42□□□□□ -1.7
SCN3A-201ENST00000283254 AKT3Q9Y243 479 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 ZNF804BA4D1E1 1349 aa4.42□□□□□ -1.7
SCN3A-201ENST00000283254 FAM95CA0A1B0GW59 222 aa4.41□□□□□ -1.7
SCN3A-201ENST00000283254 INHBAP08476 426 aa4.41□□□□□ -1.7
SCN3A-201ENST00000283254 ACBD5Q5T8D3 534 aaPredicted RBP4.41□□□□□ -1.7
SCN3A-201ENST00000283254 DNAJC10Q8IXB1 793 aa4.41□□□□□ -1.7
SCN3A-201ENST00000283254 TBC1D19Q8N5T2 526 aa4.41□□□□□ -1.7
SCN3A-201ENST00000283254 FANCBQ8NB91 859 aa4.41□□□□□ -1.7
SCN3A-201ENST00000283254 ZNF274Q96GC6 653 aaPredicted RBP4.41□□□□□ -1.7
SCN3A-201ENST00000283254 CALR3Q96L12 384 aaKnown RBP4.41□□□□□ -1.7
SCN3A-201ENST00000283254 LSM14BQ9BX40 385 aaKnown RBP4.41□□□□□ -1.7
SCN3A-201ENST00000283254 MAGEB5Q9BZ81 275 aa4.41□□□□□ -1.7
SCN3A-201ENST00000283254 SERPINB13Q9UIV8 391 aa4.41□□□□□ -1.7
SCN3A-201ENST00000283254 SCINQ9Y6U3 715 aa4.41□□□□□ -1.7
SCN3A-201ENST00000283254 CNTRLQ7Z7A1 2325 aa4.41□□□□□ -1.7
SCN3A-201ENST00000283254 NVLO15381 856 aaKnown RBP4.41□□□□□ -1.7
SCN3A-201ENST00000283254 PSMA3P25788 255 aa4.41□□□□□ -1.7
SCN3A-201ENST00000283254 BTDP43251 543 aa4.41□□□□□ -1.7
SCN3A-201ENST00000283254 EPHB1P54762 984 aa4.41□□□□□ -1.7
SCN3A-201ENST00000283254 KRT39Q6A163 491 aa4.41□□□□□ -1.7
SCN3A-201ENST00000283254 KIAA0825Q8IV33 1275 aa4.41□□□□□ -1.7
SCN3A-201ENST00000283254 ZNF496Q96IT1 587 aaPredicted RBP4.41□□□□□ -1.7
SCN3A-201ENST00000283254 GSDMAQ96QA5 445 aa4.41□□□□□ -1.7
SCN3A-201ENST00000283254 TRPV6Q9H1D0 765 aa4.41□□□□□ -1.7
SCN3A-201ENST00000283254 MAD1L1Q9Y6D9 718 aa4.41□□□□□ -1.7
SCN3A-201ENST00000283254 TNKSO95271 1327 aa4.41□□□□□ -1.7
SCN3A-201ENST00000283254 RASGRF2O14827 1237 aa4.41□□□□□ -1.7
SCN3A-201ENST00000283254 PPEF1O14829 653 aaPredicted RBP4.41□□□□□ -1.7
SCN3A-201ENST00000283254 CPP00450 1065 aa4.41□□□□□ -1.7
SCN3A-201ENST00000283254 IL6STP40189 918 aaPredicted RBP4.41□□□□□ -1.7
SCN3A-201ENST00000283254 GABPB1Q06547 395 aaPredicted RBP4.41□□□□□ -1.7
SCN3A-201ENST00000283254 NXNQ6DKJ4 435 aa4.41□□□□□ -1.7
SCN3A-201ENST00000283254 PPP4R3CPQ6ZMV5 832 aa4.41□□□□□ -1.7
SCN3A-201ENST00000283254 NELFCDQ8IXH7 590 aa4.41□□□□□ -1.7
SCN3A-201ENST00000283254 C2orf69Q8N8R5 385 aa4.41□□□□□ -1.7
SCN3A-201ENST00000283254 COA7Q96BR5 231 aa4.41□□□□□ -1.7
SCN3A-201ENST00000283254 SLC38A10Q9HBR0 1119 aa4.41□□□□□ -1.7
SCN3A-201ENST00000283254 LRRC4Q9HBW1 653 aa4.41□□□□□ -1.7
SCN3A-201ENST00000283254 RNF14Q9UBS8 474 aa4.41□□□□□ -1.7
SCN3A-201ENST00000283254 ZMYM6O95789 1325 aa4.41□□□□□ -1.7
SCN3A-201ENST00000283254 PLEKHG3A1L390 1219 aa4.41□□□□□ -1.7
SCN3A-201ENST00000283254 IL9RQ01113 521 aa4.41□□□□□ -1.7
SCN3A-201ENST00000283254 ADAM9Q13443 819 aa4.41□□□□□ -1.7
SCN3A-201ENST00000283254 ARHGAP44Q17R89 818 aa4.41□□□□□ -1.7
SCN3A-201ENST00000283254 SCYL2Q6P3W7 929 aa4.41□□□□□ -1.7
SCN3A-201ENST00000283254 PDIK1LQ8N165 341 aa4.41□□□□□ -1.7
SCN3A-201ENST00000283254 GPATCH11Q8N954 259 aa4.41□□□□□ -1.7
SCN3A-201ENST00000283254 TCP11Q8WWU5 503 aa4.41□□□□□ -1.7
SCN3A-201ENST00000283254 LARP4BQ92615 738 aaKnown RBP4.41□□□□□ -1.7
SCN3A-201ENST00000283254 RIPOR2Q9Y4F9 1068 aa4.41□□□□□ -1.7
SCN3A-201ENST00000283254 A0A1W2PQ27 194 aa4.41□□□□□ -1.7
SCN3A-201ENST00000283254 A0A1W2PQ64 194 aa4.41□□□□□ -1.7
SCN3A-201ENST00000283254 A0A1W2PQD8 194 aa4.41□□□□□ -1.7
SCN3A-201ENST00000283254 NR1H3Q13133 447 aa4.41□□□□□ -1.7
SCN3A-201ENST00000283254 DNAJC24Q6P3W2 148 aa4.41□□□□□ -1.7
SCN3A-201ENST00000283254 RSBN1LQ6PCB5 846 aaPredicted RBP4.41□□□□□ -1.7
SCN3A-201ENST00000283254 LRRC31Q6UY01 552 aa4.41□□□□□ -1.7
SCN3A-201ENST00000283254 KLHL7Q8IXQ5 586 aa4.41□□□□□ -1.7
SCN3A-201ENST00000283254 N4BP2L2Q92802 583 aaPredicted RBP4.41□□□□□ -1.7
SCN3A-201ENST00000283254 SUDS3Q9H7L9 328 aaPredicted RBP4.41□□□□□ -1.7
SCN3A-201ENST00000283254 TLK1Q9UKI8 766 aa4.41□□□□□ -1.7
SCN3A-201ENST00000283254 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.41□□□□□ -1.7
SCN3A-201ENST00000283254 ASNSP08243 561 aa4.41□□□□□ -1.7
SCN3A-201ENST00000283254 ADRA2BP18089 450 aa4.41□□□□□ -1.7
SCN3A-201ENST00000283254 SLC8A1P32418 973 aa4.41□□□□□ -1.7
SCN3A-201ENST00000283254 STAT2P52630 851 aa4.41□□□□□ -1.7
SCN3A-201ENST00000283254 MYL7Q01449 175 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms