RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 SCAF8Q9UPN6 1271 aaKnown RBP10.77□□□□□ -0.68
TRIM55-201ENST00000276573 A0A1B0GTH6 734 aa10.77□□□□□ -0.69
TRIM55-201ENST00000276573 POTEMA6NI47 508 aa10.77□□□□□ -0.69
TRIM55-201ENST00000276573 PTGER2P43116 358 aa10.77□□□□□ -0.69
TRIM55-201ENST00000276573 TERF1P54274 439 aa10.77□□□□□ -0.69
TRIM55-201ENST00000276573 ARHGAP4P98171 946 aa10.77□□□□□ -0.69
TRIM55-201ENST00000276573 RASSF7Q02833 373 aa10.77□□□□□ -0.69
TRIM55-201ENST00000276573 TBX2Q13207 712 aaPredicted RBP10.77□□□□□ -0.69
TRIM55-201ENST00000276573 TNFAIP1Q13829 316 aa10.77□□□□□ -0.69
TRIM55-201ENST00000276573 TPD52L1Q16890 204 aaPredicted RBP10.77□□□□□ -0.69
TRIM55-201ENST00000276573 FAM160B2Q86V87 743 aa10.77□□□□□ -0.69
TRIM55-201ENST00000276573 TEX2Q8IWB9 1127 aa10.77□□□□□ -0.69
TRIM55-201ENST00000276573 GIMAP8Q8ND71 665 aaPredicted RBP10.77□□□□□ -0.69
TRIM55-201ENST00000276573 CCDC47Q96A33 483 aaKnown RBP10.77□□□□□ -0.69
TRIM55-201ENST00000276573 CDK5RAP3Q96JB5 506 aa10.77□□□□□ -0.69
TRIM55-201ENST00000276573 GLIS2Q9BZE0 524 aaPredicted RBP10.77□□□□□ -0.69
TRIM55-201ENST00000276573 KCNMB3Q9NPA1 279 aa10.77□□□□□ -0.69
TRIM55-201ENST00000276573 MYH7BA7E2Y1 1941 aa10.77□□□□□ -0.69
TRIM55-201ENST00000276573 LRRC10BA6NIK2 292 aa10.76□□□□□ -0.69
TRIM55-201ENST00000276573 H7C1D1 291 aa10.76□□□□□ -0.69
TRIM55-201ENST00000276573 PIK3CDO00329 1044 aa10.76□□□□□ -0.69
TRIM55-201ENST00000276573 COBLO75128 1261 aa10.76□□□□□ -0.69
TRIM55-201ENST00000276573 SFPQP23246 707 aaKnown RBP eCLIP10.76□□□□□ -0.69
TRIM55-201ENST00000276573 SREBF1P36956 1147 aa10.76□□□□□ -0.69
TRIM55-201ENST00000276573 MCM6Q14566 821 aa10.76□□□□□ -0.69
TRIM55-201ENST00000276573 ZYXQ15942 572 aaKnown RBP10.76□□□□□ -0.69
TRIM55-201ENST00000276573 TMEM119Q4V9L6 283 aa10.76□□□□□ -0.69
TRIM55-201ENST00000276573 SAMD7Q7Z3H4 446 aa10.76□□□□□ -0.69
TRIM55-201ENST00000276573 MICALL2Q8IY33 904 aa10.76□□□□□ -0.69
TRIM55-201ENST00000276573 SNX29Q8TEQ0 813 aa10.76□□□□□ -0.69
TRIM55-201ENST00000276573 GJA10Q969M2 543 aa10.76□□□□□ -0.69
TRIM55-201ENST00000276573 CTAGE1Q96RT6 745 aa10.76□□□□□ -0.69
TRIM55-201ENST00000276573 GTPBP4Q9BZE4 634 aaKnown RBP10.76□□□□□ -0.69
TRIM55-201ENST00000276573 RANBP17Q9H2T7 1088 aaKnown RBP10.76□□□□□ -0.69
TRIM55-201ENST00000276573 ADD3Q9UEY8 706 aaKnown RBP10.76□□□□□ -0.69
TRIM55-201ENST00000276573 FEM1BQ9UK73 627 aa10.76□□□□□ -0.69
TRIM55-201ENST00000276573 MAPK8IP1Q9UQF2 711 aa10.76□□□□□ -0.69
TRIM55-201ENST00000276573 GJA3Q9Y6H8 435 aa10.76□□□□□ -0.69
TRIM55-201ENST00000276573 SPDYE3A6NKU9 549 aa10.76□□□□□ -0.69
TRIM55-201ENST00000276573 TAL1P17542 331 aaPredicted RBP10.76□□□□□ -0.69
TRIM55-201ENST00000276573 CIITAP33076 1130 aa10.76□□□□□ -0.69
TRIM55-201ENST00000276573 PDE4DQ08499 809 aa10.76□□□□□ -0.69
TRIM55-201ENST00000276573 STIM1Q13586 685 aa10.76□□□□□ -0.69
TRIM55-201ENST00000276573 PTPN21Q16825 1174 aa10.76□□□□□ -0.69
TRIM55-201ENST00000276573 Q4G0T1 1027 aa10.76□□□□□ -0.69
TRIM55-201ENST00000276573 TBC1D10BQ4KMP7 808 aaPredicted RBP10.76□□□□□ -0.69
TRIM55-201ENST00000276573 HYIQ5T013 277 aa10.76□□□□□ -0.69
TRIM55-201ENST00000276573 CCDC84Q86UT8 332 aaPredicted RBP10.76□□□□□ -0.69
TRIM55-201ENST00000276573 RAD54LQ92698 747 aa10.76□□□□□ -0.69
TRIM55-201ENST00000276573 KIFC2Q96AC6 838 aa10.76□□□□□ -0.69
TRIM55-201ENST00000276573 DHTKD1Q96HY7 919 aaPredicted RBP10.76□□□□□ -0.69
TRIM55-201ENST00000276573 KCND1Q9NSA2 647 aa10.76□□□□□ -0.69
TRIM55-201ENST00000276573 GINM1Q9NU53 330 aa10.76□□□□□ -0.69
TRIM55-201ENST00000276573 LIMA1Q9UHB6 759 aaKnown RBP10.76□□□□□ -0.69
TRIM55-201ENST00000276573 PVALEFA0A1B0GWK0 134 aa10.75□□□□□ -0.69
TRIM55-201ENST00000276573 MYMKA6NI61 221 aa10.75□□□□□ -0.69
TRIM55-201ENST00000276573 TBX3O15119 743 aa10.75□□□□□ -0.69
TRIM55-201ENST00000276573 TEX33O43247 280 aa10.75□□□□□ -0.69
TRIM55-201ENST00000276573 SLC26A4O43511 780 aa10.75□□□□□ -0.69
TRIM55-201ENST00000276573 CYP3A4P08684 503 aa10.75□□□□□ -0.69
TRIM55-201ENST00000276573 HOXA13P31271 388 aaPredicted RBP10.75□□□□□ -0.69
TRIM55-201ENST00000276573 ASIC1P78348 528 aa10.75□□□□□ -0.69
TRIM55-201ENST00000276573 ECM1Q16610 540 aa10.75□□□□□ -0.69
TRIM55-201ENST00000276573 FILIP1LQ4L180 1135 aa10.75□□□□□ -0.69
TRIM55-201ENST00000276573 SPECC1LQ69YQ0 1117 aa10.75□□□□□ -0.69
TRIM55-201ENST00000276573 CCDC174Q6PII3 467 aa10.75□□□□□ -0.69
TRIM55-201ENST00000276573 KCNK18Q7Z418 384 aa10.75□□□□□ -0.69
TRIM55-201ENST00000276573 SLFN12Q8IYM2 578 aa10.75□□□□□ -0.69
TRIM55-201ENST00000276573 TBC1D5Q92609 795 aa10.75□□□□□ -0.69
TRIM55-201ENST00000276573 LARP4BQ92615 738 aaKnown RBP10.75□□□□□ -0.69
TRIM55-201ENST00000276573 LRRC27Q9C0I9 530 aa10.75□□□□□ -0.69
TRIM55-201ENST00000276573 TMX1Q9H3N1 280 aa10.75□□□□□ -0.69
TRIM55-201ENST00000276573 EXOC1Q9NV70 894 aa10.75□□□□□ -0.69
TRIM55-201ENST00000276573 HACL1Q9UJ83 578 aa10.75□□□□□ -0.69
TRIM55-201ENST00000276573 MRPL11Q9Y3B7 192 aaKnown RBP10.75□□□□□ -0.69
TRIM55-201ENST00000276573 NRDCO43847 1150 aa10.74□□□□□ -0.69
TRIM55-201ENST00000276573 CTNND1O60716 968 aaKnown RBP10.74□□□□□ -0.69
TRIM55-201ENST00000276573 CCT6AP40227 531 aaKnown RBP10.74□□□□□ -0.69
TRIM55-201ENST00000276573 SPAG1Q07617 926 aa10.74□□□□□ -0.69
TRIM55-201ENST00000276573 CNNM4Q6P4Q7 775 aa10.74□□□□□ -0.69
TRIM55-201ENST00000276573 NLGN2Q8NFZ4 835 aa10.74□□□□□ -0.69
TRIM55-201ENST00000276573 ETNPPLQ8TBG4 499 aa10.74□□□□□ -0.69
TRIM55-201ENST00000276573 ZNF341Q9BYN7 854 aa10.74□□□□□ -0.69
TRIM55-201ENST00000276573 FBXO28Q9NVF7 368 aa10.74□□□□□ -0.69
TRIM55-201ENST00000276573 ASTN2O75129 1339 aaPredicted RBP10.74□□□□□ -0.69
TRIM55-201ENST00000276573 PSDA5PKW4 1024 aaPredicted RBP10.74□□□□□ -0.69
TRIM55-201ENST00000276573 FAM86B1E9PN63 330 aa10.74□□□□□ -0.69
TRIM55-201ENST00000276573 PSMA7O14818 248 aa10.74□□□□□ -0.69
TRIM55-201ENST00000276573 FAM86B2P0C5J1 330 aa10.74□□□□□ -0.69
TRIM55-201ENST00000276573 CCNE1P24864 410 aa10.74□□□□□ -0.69
TRIM55-201ENST00000276573 INPP5BP32019 993 aa10.74□□□□□ -0.69
TRIM55-201ENST00000276573 PBX1P40424 430 aa10.74□□□□□ -0.69
TRIM55-201ENST00000276573 PPP1R2P41236 205 aa10.74□□□□□ -0.69
TRIM55-201ENST00000276573 KCNJ6P48051 423 aa10.74□□□□□ -0.69
TRIM55-201ENST00000276573 STK4Q13043 487 aa10.74□□□□□ -0.69
TRIM55-201ENST00000276573 KRT31Q15323 416 aa10.74□□□□□ -0.69
TRIM55-201ENST00000276573 COBLL1Q53SF7 1204 aa10.74□□□□□ -0.69
TRIM55-201ENST00000276573 PRR16Q569H4 304 aa10.74□□□□□ -0.69
TRIM55-201ENST00000276573 TCP11X2Q5H9J9 407 aa10.74□□□□□ -0.69
TRIM55-201ENST00000276573 UNC13DQ70J99 1090 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms