RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 ARL13BQ3SXY8 428 aa14.36□□□□□ -0.11
PRDM16-201ENST00000270722 PHKBQ93100 1093 aa14.36□□□□□ -0.11
PRDM16-201ENST00000270722 ANKRD36BP1Q96IX9 119 aa14.36□□□□□ -0.11
PRDM16-201ENST00000270722 NOP53Q9NZM5 478 aaKnown RBP14.36□□□□□ -0.11
PRDM16-201ENST00000270722 RGS16O15492 202 aaPredicted RBP14.36□□□□□ -0.11
PRDM16-201ENST00000270722 MED7O43513 233 aa14.36□□□□□ -0.11
PRDM16-201ENST00000270722 STX2P32856 288 aa14.36□□□□□ -0.11
PRDM16-201ENST00000270722 WASHC5Q12768 1159 aa14.36□□□□□ -0.11
PRDM16-201ENST00000270722 NECAB1Q8N987 351 aa14.36□□□□□ -0.11
PRDM16-201ENST00000270722 ENOX1Q8TC92 643 aaKnown RBP14.36□□□□□ -0.11
PRDM16-201ENST00000270722 TLK1Q9UKI8 766 aa14.36□□□□□ -0.11
PRDM16-201ENST00000270722 HOXD10P28358 340 aa14.36□□□□□ -0.11
PRDM16-201ENST00000270722 IGBP1P78318 339 aa14.36□□□□□ -0.11
PRDM16-201ENST00000270722 SFSWAPQ12872 951 aaKnown RBP14.36□□□□□ -0.11
PRDM16-201ENST00000270722 ZNF174Q15697 407 aa14.36□□□□□ -0.11
PRDM16-201ENST00000270722 BSPRYQ5W0U4 402 aa14.36□□□□□ -0.11
PRDM16-201ENST00000270722 GADL1Q6ZQY3 521 aa14.36□□□□□ -0.11
PRDM16-201ENST00000270722 PIK3AP1Q6ZUJ8 805 aa14.36□□□□□ -0.11
PRDM16-201ENST00000270722 SAP30BPQ9UHR5 308 aaKnown RBP14.36□□□□□ -0.11
PRDM16-201ENST00000270722 FARP1Q9Y4F1 1045 aaPredicted RBP14.36□□□□□ -0.11
PRDM16-201ENST00000270722 SBNO2Q9Y2G9 1366 aa14.36□□□□□ -0.11
PRDM16-201ENST00000270722 IGSF3O75054 1194 aa14.36□□□□□ -0.11
PRDM16-201ENST00000270722 RPSAP08865 295 aaKnown RBP14.36□□□□□ -0.11
PRDM16-201ENST00000270722 PTK2BQ14289 1009 aa14.36□□□□□ -0.11
PRDM16-201ENST00000270722 MRPS26Q9BYN8 205 aaKnown RBP14.36□□□□□ -0.11
PRDM16-201ENST00000270722 CXorf56Q9H5V9 222 aa14.36□□□□□ -0.11
PRDM16-201ENST00000270722 MAGEA1P43355 309 aa14.36□□□□□ -0.11
PRDM16-201ENST00000270722 NSFP46459 744 aaKnown RBP14.36□□□□□ -0.11
PRDM16-201ENST00000270722 PTK2Q05397 1052 aa14.36□□□□□ -0.11
PRDM16-201ENST00000270722 APOBRQ0VD83 1088 aa14.36□□□□□ -0.11
PRDM16-201ENST00000270722 KHDRBS2Q5VWX1 349 aaKnown RBP14.36□□□□□ -0.11
PRDM16-201ENST00000270722 KLC3Q6P597 504 aa14.36□□□□□ -0.11
PRDM16-201ENST00000270722 KCTD17Q8N5Z5 321 aa14.36□□□□□ -0.11
PRDM16-201ENST00000270722 IFIH1Q9BYX4 1025 aaKnown RBP14.36□□□□□ -0.11
PRDM16-201ENST00000270722 APBA3O96018 575 aa14.36□□□□□ -0.11
PRDM16-201ENST00000270722 NNMTP40261 264 aa14.36□□□□□ -0.11
PRDM16-201ENST00000270722 CEBPAP49715 358 aaPredicted RBP14.36□□□□□ -0.11
PRDM16-201ENST00000270722 PDZD8Q8NEN9 1154 aa14.36□□□□□ -0.11
PRDM16-201ENST00000270722 SPZ1Q9BXG8 430 aa14.36□□□□□ -0.11
PRDM16-201ENST00000270722 SNX25Q9H3E2 840 aa14.36□□□□□ -0.11
PRDM16-201ENST00000270722 IFNB1P01574 187 aa14.35□□□□□ -0.11
PRDM16-201ENST00000270722 LARP6Q9BRS8 491 aaKnown RBP14.35□□□□□ -0.11
PRDM16-201ENST00000270722 MAP3K1Q13233 1512 aa14.35□□□□□ -0.11
PRDM16-201ENST00000270722 ARMCX5Q6P1M9 558 aa14.35□□□□□ -0.11
PRDM16-201ENST00000270722 HORMAD1Q86X24 394 aa14.35□□□□□ -0.11
PRDM16-201ENST00000270722 SCYL1Q96KG9 808 aa14.35□□□□□ -0.11
PRDM16-201ENST00000270722 GRIN2AQ12879 1464 aa14.35□□□□□ -0.11
PRDM16-201ENST00000270722 M0R2C6 588 aa14.35□□□□□ -0.11
PRDM16-201ENST00000270722 TPH2Q8IWU9 490 aa14.35□□□□□ -0.11
PRDM16-201ENST00000270722 SLC24A3Q9HC58 644 aa14.35□□□□□ -0.11
PRDM16-201ENST00000270722 LAD1O00515 517 aa14.35□□□□□ -0.11
PRDM16-201ENST00000270722 SEMA3EO15041 775 aa14.35□□□□□ -0.11
PRDM16-201ENST00000270722 PRDM1O75626 825 aa14.35□□□□□ -0.11
PRDM16-201ENST00000270722 IREB2P48200 963 aaKnown RBP14.35□□□□□ -0.11
PRDM16-201ENST00000270722 KIF9Q9HAQ2 790 aa14.35□□□□□ -0.11
PRDM16-201ENST00000270722 TBC1D23Q9NUY8 699 aa14.35□□□□□ -0.11
PRDM16-201ENST00000270722 ITM2BQ9Y287 266 aa14.35□□□□□ -0.11
PRDM16-201ENST00000270722 HSPA6P17066 643 aa14.35□□□□□ -0.11
PRDM16-201ENST00000270722 HSP90AA4PQ58FG1 418 aa14.35□□□□□ -0.11
PRDM16-201ENST00000270722 QKIQ96PU8 341 aaKnown RBP eCLIP14.35□□□□□ -0.11
PRDM16-201ENST00000270722 CAPS2Q9BXY5 557 aa14.35□□□□□ -0.11
PRDM16-201ENST00000270722 UBN1Q9NPG3 1134 aa14.35□□□□□ -0.11
PRDM16-201ENST00000270722 STK17AQ9UEE5 414 aa14.35□□□□□ -0.11
PRDM16-201ENST00000270722 HDAC4P56524 1084 aa14.35□□□□□ -0.11
PRDM16-201ENST00000270722 DNM1Q05193 864 aaKnown RBP14.35□□□□□ -0.11
PRDM16-201ENST00000270722 C6orf118Q5T5N4 469 aa14.35□□□□□ -0.11
PRDM16-201ENST00000270722 ZNF711Q9Y462 761 aa14.35□□□□□ -0.11
PRDM16-201ENST00000270722 hCG_1984214I3L0E3 225 aa14.34□□□□□ -0.11
PRDM16-201ENST00000270722 C17orf50Q8WW18 174 aa14.34□□□□□ -0.11
PRDM16-201ENST00000270722 SLC39A6Q13433 755 aa14.34□□□□□ -0.11
PRDM16-201ENST00000270722 USH1GQ495M9 461 aa14.34□□□□□ -0.11
PRDM16-201ENST00000270722 BCS1LQ9Y276 419 aa14.34□□□□□ -0.11
PRDM16-201ENST00000270722 ABCA10Q8WWZ4 1543 aa14.34□□□□□ -0.11
PRDM16-201ENST00000270722 TSTA3Q13630 321 aaPredicted RBP14.34□□□□□ -0.11
PRDM16-201ENST00000270722 RYBPQ8N488 228 aaPredicted RBP14.34□□□□□ -0.11
PRDM16-201ENST00000270722 AK9Q5TCS8 1911 aa14.34□□□□□ -0.11
PRDM16-201ENST00000270722 A2MP01023 1474 aa14.34□□□□□ -0.11
PRDM16-201ENST00000270722 TFCP2Q12800 502 aa14.34□□□□□ -0.11
PRDM16-201ENST00000270722 PGBD1Q96JS3 809 aa14.34□□□□□ -0.11
PRDM16-201ENST00000270722 CUEDC2Q9H467 287 aa14.34□□□□□ -0.11
PRDM16-201ENST00000270722 PSTPIP2Q9H939 334 aa14.34□□□□□ -0.11
PRDM16-201ENST00000270722 DCDC2Q9UHG0 476 aa14.34□□□□□ -0.11
PRDM16-201ENST00000270722 PIK3C2GO75747 1445 aa14.34□□□□□ -0.11
PRDM16-201ENST00000270722 CDK13Q14004 1512 aaKnown RBP14.34□□□□□ -0.11
PRDM16-201ENST00000270722 PSMA3P25788 255 aa14.34□□□□□ -0.11
PRDM16-201ENST00000270722 NXNQ6DKJ4 435 aa14.34□□□□□ -0.11
PRDM16-201ENST00000270722 CEP85Q6P2H3 762 aa14.34□□□□□ -0.11
PRDM16-201ENST00000270722 TMED8Q6PL24 325 aaPredicted RBP14.34□□□□□ -0.11
PRDM16-201ENST00000270722 TADA2BQ86TJ2 420 aa14.34□□□□□ -0.11
PRDM16-201ENST00000270722 RNF139Q8WU17 664 aa14.34□□□□□ -0.11
PRDM16-201ENST00000270722 CCDC138Q96M89 665 aa14.34□□□□□ -0.11
PRDM16-201ENST00000270722 USP21Q9UK80 565 aa14.34□□□□□ -0.11
PRDM16-201ENST00000270722 ECM2O94769 699 aaPredicted RBP14.34□□□□□ -0.11
PRDM16-201ENST00000270722 RPS8P62241 208 aaKnown RBP14.34□□□□□ -0.11
PRDM16-201ENST00000270722 ZNF790Q6PG37 636 aa14.34□□□□□ -0.11
PRDM16-201ENST00000270722 MEIS3Q99687 375 aa14.34□□□□□ -0.11
PRDM16-201ENST00000270722 PARD3Q8TEW0 1356 aa14.34□□□□□ -0.11
PRDM16-201ENST00000270722 MAP3K15Q6ZN16 1313 aa14.34□□□□□ -0.11
PRDM16-201ENST00000270722 RHOXF2BP0C7M4 288 aa14.34□□□□□ -0.11
PRDM16-201ENST00000270722 LIG3P49916 1009 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms