RNA–Protein interactions for RNA: ENST00000267484.9

RTN1-201, Transcript of reticulon 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RTN1, Length 3,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-201ENST00000267484 CCDC47Q96A33 483 aaKnown RBP18.78■□□□□ 0.6
RTN1-201ENST00000267484 RPGRIP1Q96KN7 1286 aa18.78■□□□□ 0.6
RTN1-201ENST00000267484 ERGIC2Q96RQ1 377 aa18.78■□□□□ 0.6
RTN1-201ENST00000267484 MKRN1Q9UHC7 482 aaKnown RBP18.78■□□□□ 0.6
RTN1-201ENST00000267484 TACC1O75410 805 aa18.78■□□□□ 0.6
RTN1-201ENST00000267484 PACS2Q86VP3 889 aa18.78■□□□□ 0.6
RTN1-201ENST00000267484 ZSCAN29Q8IWY8 852 aaPredicted RBP18.78■□□□□ 0.6
RTN1-201ENST00000267484 TSEN2Q8NCE0 465 aaKnown RBP18.78■□□□□ 0.6
RTN1-201ENST00000267484 OSBPL9Q96SU4 736 aa18.78■□□□□ 0.6
RTN1-201ENST00000267484 C7orf25Q9BPX7 421 aa18.78■□□□□ 0.6
RTN1-201ENST00000267484 NAP1L1P55209 391 aaKnown RBP18.78■□□□□ 0.6
RTN1-201ENST00000267484 RASSF7Q02833 373 aa18.78■□□□□ 0.6
RTN1-201ENST00000267484 NONOQ15233 471 aaKnown RBP eCLIP18.78■□□□□ 0.6
RTN1-201ENST00000267484 VWA3BQ502W6 1294 aa18.78■□□□□ 0.6
RTN1-201ENST00000267484 ZNF662Q6ZS27 426 aa18.78■□□□□ 0.6
RTN1-201ENST00000267484 FAM114A1Q8IWE2 563 aa18.78■□□□□ 0.6
RTN1-201ENST00000267484 LINC00116Q8NCU8 138 aa18.78■□□□□ 0.6
RTN1-201ENST00000267484 FAM76AQ8TAV0 307 aa18.78■□□□□ 0.6
RTN1-201ENST00000267484 NLRC4Q9NPP4 1024 aa18.78■□□□□ 0.6
RTN1-201ENST00000267484 PLAGL2Q9UPG8 496 aa18.78■□□□□ 0.6
RTN1-201ENST00000267484 SIK3Q9Y2K2 1263 aa18.78■□□□□ 0.6
RTN1-201ENST00000267484 JRKLQ9Y4A0 524 aa18.78■□□□□ 0.6
RTN1-201ENST00000267484 PPFIA4O75335 1185 aa18.77■□□□□ 0.6
RTN1-201ENST00000267484 PPARDQ03181 441 aa18.77■□□□□ 0.6
RTN1-201ENST00000267484 ENOX2Q16206 610 aaKnown RBP18.77■□□□□ 0.6
RTN1-201ENST00000267484 TRIM58Q8NG06 486 aa18.77■□□□□ 0.6
RTN1-201ENST00000267484 NUDT12Q9BQG2 462 aa18.77■□□□□ 0.6
RTN1-201ENST00000267484 FAM184BQ9ULE4 1060 aa18.77■□□□□ 0.6
RTN1-201ENST00000267484 SCN7AQ01118 1682 aa18.77■□□□□ 0.6
RTN1-201ENST00000267484 PALM3A6NDB9 673 aaPredicted RBP18.77■□□□□ 0.6
RTN1-201ENST00000267484 POTEMA6NI47 508 aa18.77■□□□□ 0.6
RTN1-201ENST00000267484 USO1O60763 962 aaKnown RBP18.77■□□□□ 0.6
RTN1-201ENST00000267484 MYL1P05976 194 aa18.77■□□□□ 0.6
RTN1-201ENST00000267484 CCT5P48643 541 aa18.77■□□□□ 0.6
RTN1-201ENST00000267484 PIGSQ96S52 555 aa18.77■□□□□ 0.6
RTN1-201ENST00000267484 TANGO6Q9C0B7 1094 aa18.77■□□□□ 0.6
RTN1-201ENST00000267484 ZSCAN5CA6NGD5 496 aaPredicted RBP18.77■□□□□ 0.59
RTN1-201ENST00000267484 RNASE9P60153 205 aaKnown RBP18.77■□□□□ 0.59
RTN1-201ENST00000267484 TMED8Q6PL24 325 aaPredicted RBP18.77■□□□□ 0.59
RTN1-201ENST00000267484 DAGLBQ8NCG7 672 aa18.77■□□□□ 0.59
RTN1-201ENST00000267484 MTMR8Q96EF0 704 aa18.77■□□□□ 0.59
RTN1-201ENST00000267484 ESYT3A0FGR9 886 aa18.76■□□□□ 0.59
RTN1-201ENST00000267484 PRPHP41219 470 aa18.76■□□□□ 0.59
RTN1-201ENST00000267484 GNAQP50148 359 aa18.76■□□□□ 0.59
RTN1-201ENST00000267484 GRB10Q13322 594 aa18.76■□□□□ 0.59
RTN1-201ENST00000267484 NEK8Q86SG6 692 aa18.76■□□□□ 0.59
RTN1-201ENST00000267484 ZMYND12Q9H0C1 365 aa18.76■□□□□ 0.59
RTN1-201ENST00000267484 BLOC1S4Q9NUP1 217 aa18.76■□□□□ 0.59
RTN1-201ENST00000267484 RASA1P20936 1047 aa18.76■□□□□ 0.59
RTN1-201ENST00000267484 SLC1A4P43007 532 aa18.76■□□□□ 0.59
RTN1-201ENST00000267484 MAGEA1P43355 309 aa18.76■□□□□ 0.59
RTN1-201ENST00000267484 CCDC181Q5TID7 509 aa18.76■□□□□ 0.59
RTN1-201ENST00000267484 ARL8AQ96BM9 186 aa18.76■□□□□ 0.59
RTN1-201ENST00000267484 RBM12Q9NTZ6 932 aaKnown RBP18.76■□□□□ 0.59
RTN1-201ENST00000267484 CNNM4Q6P4Q7 775 aa18.75■□□□□ 0.59
RTN1-201ENST00000267484 KIAA1551Q9HCM1 1747 aa18.75■□□□□ 0.59
RTN1-201ENST00000267484 LDHBP07195 334 aaKnown RBP18.75■□□□□ 0.59
RTN1-201ENST00000267484 CENPPQ6IPU0 288 aa18.75■□□□□ 0.59
RTN1-201ENST00000267484 KCNK18Q7Z418 384 aa18.75■□□□□ 0.59
RTN1-201ENST00000267484 SLC37A4O43826 429 aa18.75■□□□□ 0.59
RTN1-201ENST00000267484 TDP2O95551 362 aa18.75■□□□□ 0.59
RTN1-201ENST00000267484 IRAK1P51617 712 aa18.75■□□□□ 0.59
RTN1-201ENST00000267484 TDRD12Q587J7 1177 aaKnown RBP18.75■□□□□ 0.59
RTN1-201ENST00000267484 KCTD16Q68DU8 428 aa18.75■□□□□ 0.59
RTN1-201ENST00000267484 SV2BQ7L1I2 683 aa18.75■□□□□ 0.59
RTN1-201ENST00000267484 FNBP4Q8N3X1 1017 aaPredicted RBP18.75■□□□□ 0.59
RTN1-201ENST00000267484 CALML4Q96GE6 196 aa18.75■□□□□ 0.59
RTN1-201ENST00000267484 NLRP3Q96P20 1036 aa18.75■□□□□ 0.59
RTN1-201ENST00000267484 TSGA10Q9BZW7 698 aa18.75■□□□□ 0.59
RTN1-201ENST00000267484 TBC1D7Q9P0N9 293 aa18.75■□□□□ 0.59
RTN1-201ENST00000267484 FRMPD2Q68DX3 1309 aaPredicted RBP18.75■□□□□ 0.59
RTN1-201ENST00000267484 A0A1W2PQJ5 194 aa18.74■□□□□ 0.59
RTN1-201ENST00000267484 LAD1O00515 517 aa18.74■□□□□ 0.59
RTN1-201ENST00000267484 MAGEA9P43362 315 aa18.74■□□□□ 0.59
RTN1-201ENST00000267484 CORO7P57737 925 aa18.74■□□□□ 0.59
RTN1-201ENST00000267484 HAUS3Q68CZ6 603 aa18.74■□□□□ 0.59
RTN1-201ENST00000267484 CCDC70Q6NSX1 233 aa18.74■□□□□ 0.59
RTN1-201ENST00000267484 MMGT1Q8N4V1 131 aa18.74■□□□□ 0.59
RTN1-201ENST00000267484 SH2D3CQ8N5H7 860 aa18.74■□□□□ 0.59
RTN1-201ENST00000267484 COA7Q96BR5 231 aa18.74■□□□□ 0.59
RTN1-201ENST00000267484 AK8Q96MA6 479 aa18.74■□□□□ 0.59
RTN1-201ENST00000267484 PNMA5Q96PV4 448 aa18.74■□□□□ 0.59
RTN1-201ENST00000267484 PACSIN2Q9UNF0 486 aaPredicted RBP18.74■□□□□ 0.59
RTN1-201ENST00000267484 ARID5AQ03989 594 aa18.74■□□□□ 0.59
RTN1-201ENST00000267484 PTF1AQ7RTS3 328 aa18.74■□□□□ 0.59
RTN1-201ENST00000267484 KRT25Q7Z3Z0 450 aa18.74■□□□□ 0.59
RTN1-201ENST00000267484 NBPF5PQ86XG9 351 aaPredicted RBP18.74■□□□□ 0.59
RTN1-201ENST00000267484 CUEDC2Q9H467 287 aa18.74■□□□□ 0.59
RTN1-201ENST00000267484 IQCEQ6IPM2 695 aa18.74■□□□□ 0.59
RTN1-201ENST00000267484 ANKIB1Q9P2G1 1089 aa18.74■□□□□ 0.59
RTN1-201ENST00000267484 LAMB1P07942 1786 aa18.73■□□□□ 0.59
RTN1-201ENST00000267484 CACNA2D4Q7Z3S7 1137 aa18.73■□□□□ 0.59
RTN1-201ENST00000267484 ANKS1AQ92625 1134 aa18.73■□□□□ 0.59
RTN1-201ENST00000267484 TLR10Q9BXR5 811 aa18.73■□□□□ 0.59
RTN1-201ENST00000267484 C6orf50Q9HD87 102 aa18.73■□□□□ 0.59
RTN1-201ENST00000267484 CASZ1Q86V15 1759 aa18.73■□□□□ 0.59
RTN1-201ENST00000267484 GNGT1P63211 74 aa18.73■□□□□ 0.59
RTN1-201ENST00000267484 CDK17Q00537 523 aa18.73■□□□□ 0.59
RTN1-201ENST00000267484 AMPD3Q01432 767 aa18.73■□□□□ 0.59
RTN1-201ENST00000267484 FIGNQ5HY92 759 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms