RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 LSM14BQ9BX40 385 aaKnown RBP21.93■■□□□ 1.1
CSPG5-201ENST00000264723 KIAA1024Q9UPX6 916 aa21.93■■□□□ 1.1
CSPG5-201ENST00000264723 BCS1LQ9Y276 419 aa21.93■■□□□ 1.1
CSPG5-201ENST00000264723 TLDC2A0PJX2 215 aa21.93■■□□□ 1.1
CSPG5-201ENST00000264723 PPP1R3GB7ZBB8 358 aa21.93■■□□□ 1.1
CSPG5-201ENST00000264723 ATP1A1P05023 1023 aaKnown RBP21.93■■□□□ 1.1
CSPG5-201ENST00000264723 KLHL30Q0D2K2 578 aa21.93■■□□□ 1.1
CSPG5-201ENST00000264723 TCHPQ9BT92 498 aa21.93■■□□□ 1.1
CSPG5-201ENST00000264723 COL5A2P05997 1499 aaPredicted RBP21.93■■□□□ 1.1
CSPG5-201ENST00000264723 C21orf2O43822 256 aa21.92■■□□□ 1.1
CSPG5-201ENST00000264723 RNF40O75150 1001 aa21.92■■□□□ 1.1
CSPG5-201ENST00000264723 TUBB2AQ13885 445 aa21.92■■□□□ 1.1
CSPG5-201ENST00000264723 FBXO11Q86XK2 927 aa21.92■■□□□ 1.1
CSPG5-201ENST00000264723 NIM1KQ8IY84 436 aa21.92■■□□□ 1.1
CSPG5-201ENST00000264723 CTNNBL1Q8WYA6 563 aaPredicted RBP21.92■■□□□ 1.1
CSPG5-201ENST00000264723 TUBB2BQ9BVA1 445 aa21.92■■□□□ 1.1
CSPG5-201ENST00000264723 EBAG9O00559 213 aa21.92■■□□□ 1.1
CSPG5-201ENST00000264723 SORBS3O60504 671 aa21.92■■□□□ 1.1
CSPG5-201ENST00000264723 GCNT3O95395 438 aa21.92■■□□□ 1.1
CSPG5-201ENST00000264723 SLC9C1Q4G0N8 1177 aa21.92■■□□□ 1.1
CSPG5-201ENST00000264723 RASGRP2Q7LDG7 609 aa21.92■■□□□ 1.1
CSPG5-201ENST00000264723 ADAT2Q7Z6V5 191 aaKnown RBP21.92■■□□□ 1.1
CSPG5-201ENST00000264723 NOX5Q96PH1 765 aa21.92■■□□□ 1.1
CSPG5-201ENST00000264723 MLXIPQ9HAP2 919 aa21.92■■□□□ 1.1
CSPG5-201ENST00000264723 CEP104O60308 925 aa21.92■■□□□ 1.1
CSPG5-201ENST00000264723 FGFR2P21802 821 aa21.91■■□□□ 1.1
CSPG5-201ENST00000264723 EHHADHQ08426 723 aa21.91■■□□□ 1.1
CSPG5-201ENST00000264723 MYCT1Q8N699 235 aa21.91■■□□□ 1.1
CSPG5-201ENST00000264723 CNKSR1Q969H4 720 aa21.91■■□□□ 1.1
CSPG5-201ENST00000264723 TDRD3Q9H7E2 651 aaKnown RBP21.91■■□□□ 1.1
CSPG5-201ENST00000264723 SMARCAL1Q9NZC9 954 aa21.91■■□□□ 1.1
CSPG5-201ENST00000264723 FTCDO95954 541 aa21.91■■□□□ 1.1
CSPG5-201ENST00000264723 PABPC4Q13310 644 aaKnown RBP eCLIP21.91■■□□□ 1.1
CSPG5-201ENST00000264723 TBC1D10BQ4KMP7 808 aaPredicted RBP21.91■■□□□ 1.1
CSPG5-201ENST00000264723 MEIS1O00470 390 aa21.91■■□□□ 1.1
CSPG5-201ENST00000264723 MYCNP04198 464 aaPredicted RBP21.91■■□□□ 1.1
CSPG5-201ENST00000264723 TUBBP07437 444 aa21.91■■□□□ 1.1
CSPG5-201ENST00000264723 EEF1GP26641 437 aaKnown RBP21.91■■□□□ 1.1
CSPG5-201ENST00000264723 TUBB4BP68371 445 aa21.91■■□□□ 1.1
CSPG5-201ENST00000264723 VPS72Q15906 364 aa21.91■■□□□ 1.1
CSPG5-201ENST00000264723 ZNF512BQ96KM6 892 aaPredicted RBP21.91■■□□□ 1.1
CSPG5-201ENST00000264723 TBC1D8O95759 1140 aa21.9■■□□□ 1.1
CSPG5-201ENST00000264723 PKN1Q16512 942 aa21.9■■□□□ 1.1
CSPG5-201ENST00000264723 CCDC84Q86UT8 332 aaPredicted RBP21.9■■□□□ 1.1
CSPG5-201ENST00000264723 NWD1Q149M9 1564 aa21.9■■□□□ 1.1
CSPG5-201ENST00000264723 ALAS1P13196 640 aa21.9■■□□□ 1.1
CSPG5-201ENST00000264723 CCNE1P24864 410 aa21.9■■□□□ 1.1
CSPG5-201ENST00000264723 KCNJ6P48051 423 aa21.9■■□□□ 1.1
CSPG5-201ENST00000264723 VGLL2Q8N8G2 317 aa21.9■■□□□ 1.1
CSPG5-201ENST00000264723 PNKPQ96T60 521 aa21.9■■□□□ 1.1
CSPG5-201ENST00000264723 CCDC169A6NNP5 214 aa21.9■■□□□ 1.1
CSPG5-201ENST00000264723 LGALS16A8MUM7 142 aa21.9■■□□□ 1.1
CSPG5-201ENST00000264723 ABL1P00519 1130 aa21.9■■□□□ 1.1
CSPG5-201ENST00000264723 ERVK-24P63145 666 aa21.9■■□□□ 1.1
CSPG5-201ENST00000264723 C12orf60Q5U649 245 aa21.9■■□□□ 1.1
CSPG5-201ENST00000264723 MYOCDQ8IZQ8 938 aa21.9■■□□□ 1.1
CSPG5-201ENST00000264723 LARP4BQ92615 738 aaKnown RBP21.9■■□□□ 1.1
CSPG5-201ENST00000264723 NCK2O43639 380 aa21.89■■□□□ 1.1
CSPG5-201ENST00000264723 HARSP12081 509 aaKnown RBP21.89■■□□□ 1.1
CSPG5-201ENST00000264723 STK4Q13043 487 aa21.89■■□□□ 1.1
CSPG5-201ENST00000264723 PPP4R3AQ6IN85 833 aa21.89■■□□□ 1.1
CSPG5-201ENST00000264723 TSGA10Q9BZW7 698 aa21.89■■□□□ 1.1
CSPG5-201ENST00000264723 DUSP10Q9Y6W6 482 aa21.89■■□□□ 1.1
CSPG5-201ENST00000264723 ARHGEF35A5YM69 484 aa21.89■■□□□ 1.09
CSPG5-201ENST00000264723 OPA1O60313 960 aa21.89■■□□□ 1.09
CSPG5-201ENST00000264723 SFMBT2Q5VUG0 894 aa21.89■■□□□ 1.09
CSPG5-201ENST00000264723 FAM212AQ96EL1 285 aa21.89■■□□□ 1.09
CSPG5-201ENST00000264723 MMS19Q96T76 1030 aa21.89■■□□□ 1.09
CSPG5-201ENST00000264723 COA1Q9GZY4 146 aa21.89■■□□□ 1.09
CSPG5-201ENST00000264723 HOXA13P31271 388 aaPredicted RBP21.89■■□□□ 1.09
CSPG5-201ENST00000264723 KIAA0753Q2KHM9 967 aa21.89■■□□□ 1.09
CSPG5-201ENST00000264723 ANKRD40Q6AI12 368 aa21.89■■□□□ 1.09
CSPG5-201ENST00000264723 GALNT17Q6IS24 598 aa21.89■■□□□ 1.09
CSPG5-201ENST00000264723 USP17L15C9J2P7 530 aa21.88■■□□□ 1.09
CSPG5-201ENST00000264723 USP17L13C9JLJ4 530 aa21.88■■□□□ 1.09
CSPG5-201ENST00000264723 USP17L11C9JVI0 530 aa21.88■■□□□ 1.09
CSPG5-201ENST00000264723 USP17L18D6R9N7 530 aa21.88■■□□□ 1.09
CSPG5-201ENST00000264723 USP17L22D6RA61 530 aa21.88■■□□□ 1.09
CSPG5-201ENST00000264723 USP17L17D6RBQ6 530 aa21.88■■□□□ 1.09
CSPG5-201ENST00000264723 USP17L19D6RCP7 530 aa21.88■■□□□ 1.09
CSPG5-201ENST00000264723 USP17L20D6RJB6 530 aa21.88■■□□□ 1.09
CSPG5-201ENST00000264723 NDUFAB1O14561 156 aa21.88■■□□□ 1.09
CSPG5-201ENST00000264723 USP17L24Q0WX57 530 aa21.88■■□□□ 1.09
CSPG5-201ENST00000264723 USP17L6PQ6QN14 398 aa21.88■■□□□ 1.09
CSPG5-201ENST00000264723 TRIM58Q8NG06 486 aa21.88■■□□□ 1.09
CSPG5-201ENST00000264723 POTEDQ86YR6 584 aa21.88■■□□□ 1.09
CSPG5-201ENST00000264723 FBXL16Q8N461 479 aa21.88■■□□□ 1.09
CSPG5-201ENST00000264723 FLAD1Q8NFF5 587 aa21.88■■□□□ 1.09
CSPG5-201ENST00000264723 SASH3O75995 380 aa21.88■■□□□ 1.09
CSPG5-201ENST00000264723 ZNF18P17022 549 aa21.88■■□□□ 1.09
CSPG5-201ENST00000264723 RPL13P26373 211 aaKnown RBP21.88■■□□□ 1.09
CSPG5-201ENST00000264723 HSPA1LP34931 641 aa21.88■■□□□ 1.09
CSPG5-201ENST00000264723 SEC23AQ15436 765 aa21.88■■□□□ 1.09
CSPG5-201ENST00000264723 ASPRV1Q53RT3 343 aa21.88■■□□□ 1.09
CSPG5-201ENST00000264723 FBXO33Q7Z6M2 555 aa21.88■■□□□ 1.09
CSPG5-201ENST00000264723 GAS7O60861 476 aa21.87■■□□□ 1.09
CSPG5-201ENST00000264723 GUCY2DQ02846 1103 aa21.87■■□□□ 1.09
CSPG5-201ENST00000264723 LLGL1Q15334 1064 aa21.87■■□□□ 1.09
CSPG5-201ENST00000264723 GPATCH4Q5T3I0 446 aaKnown RBP21.87■■□□□ 1.09
CSPG5-201ENST00000264723 NAA35Q5VZE5 725 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms