RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 SPATA20Q8TB22 786 aa18.09■□□□□ 0.49
CTCF-201ENST00000264010 EEF2KMTQ96G04 330 aa18.09■□□□□ 0.49
CTCF-201ENST00000264010 B4DLN1 442 aa18.08■□□□□ 0.49
CTCF-201ENST00000264010 WNT7AO00755 349 aa18.08■□□□□ 0.49
CTCF-201ENST00000264010 ZBTB5O15062 677 aa18.08■□□□□ 0.49
CTCF-201ENST00000264010 CYTH3O43739 400 aa18.08■□□□□ 0.49
CTCF-201ENST00000264010 CHMP4BP1P59074 171 aa18.08■□□□□ 0.49
CTCF-201ENST00000264010 DDR1Q08345 913 aa18.08■□□□□ 0.49
CTCF-201ENST00000264010 ZNF543Q08ER8 600 aa18.08■□□□□ 0.49
CTCF-201ENST00000264010 MB21D1Q8N884 522 aa18.08■□□□□ 0.49
CTCF-201ENST00000264010 ARHGEF10LQ9HCE6 1279 aa18.08■□□□□ 0.49
CTCF-201ENST00000264010 LGALS16A8MUM7 142 aa18.08■□□□□ 0.48
CTCF-201ENST00000264010 PPP2R5AQ15172 486 aa18.08■□□□□ 0.48
CTCF-201ENST00000264010 DNAJC21Q5F1R6 531 aaKnown RBP18.08■□□□□ 0.48
CTCF-201ENST00000264010 HERC4Q5GLZ8 1057 aaPredicted RBP18.08■□□□□ 0.48
CTCF-201ENST00000264010 ADGRF4Q8IZF3 695 aa18.08■□□□□ 0.48
CTCF-201ENST00000264010 CDKAL1Q5VV42 579 aa18.08■□□□□ 0.48
CTCF-201ENST00000264010 DUOX1Q9NRD9 1551 aa18.08■□□□□ 0.48
CTCF-201ENST00000264010 PPIP5K2O43314 1243 aa18.07■□□□□ 0.48
CTCF-201ENST00000264010 PPP1R12BO60237 982 aaPredicted RBP18.07■□□□□ 0.48
CTCF-201ENST00000264010 RHOBTB3O94955 611 aa18.07■□□□□ 0.48
CTCF-201ENST00000264010 NF2P35240 595 aa18.07■□□□□ 0.48
CTCF-201ENST00000264010 RHBDL3P58872 404 aa18.07■□□□□ 0.48
CTCF-201ENST00000264010 USH1GQ495M9 461 aa18.07■□□□□ 0.48
CTCF-201ENST00000264010 AMIGO3Q86WK7 504 aa18.07■□□□□ 0.48
CTCF-201ENST00000264010 FBXO11Q86XK2 927 aa18.07■□□□□ 0.48
CTCF-201ENST00000264010 MYOCDQ8IZQ8 938 aa18.07■□□□□ 0.48
CTCF-201ENST00000264010 UIMC1Q96RL1 719 aa18.07■□□□□ 0.48
CTCF-201ENST00000264010 ST7Q9NRC1 585 aa18.07■□□□□ 0.48
CTCF-201ENST00000264010 GAKO14976 1311 aa18.07■□□□□ 0.48
CTCF-201ENST00000264010 ITIH6Q6UXX5 1313 aa18.07■□□□□ 0.48
CTCF-201ENST00000264010 ROBO3Q96MS0 1386 aa18.07■□□□□ 0.48
CTCF-201ENST00000264010 MYH14Q7Z406 1995 aaKnown RBP18.07■□□□□ 0.48
CTCF-201ENST00000264010 TYW1BQ6NUM6 668 aa18.07■□□□□ 0.48
CTCF-201ENST00000264010 CDC42EP5Q6NZY7 148 aa18.07■□□□□ 0.48
CTCF-201ENST00000264010 RETREG2Q8NC44 543 aa18.07■□□□□ 0.48
CTCF-201ENST00000264010 ALS2CR12Q96Q35 445 aa18.07■□□□□ 0.48
CTCF-201ENST00000264010 AMNQ9BXJ7 453 aa18.07■□□□□ 0.48
CTCF-201ENST00000264010 STK32BQ9NY57 414 aa18.07■□□□□ 0.48
CTCF-201ENST00000264010 STK24Q9Y6E0 443 aa18.07■□□□□ 0.48
CTCF-201ENST00000264010 HOXA7P31268 230 aaPredicted RBP18.07■□□□□ 0.48
CTCF-201ENST00000264010 SARNPP82979 210 aaKnown RBP18.07■□□□□ 0.48
CTCF-201ENST00000264010 GBP6Q6ZN66 633 aa18.07■□□□□ 0.48
CTCF-201ENST00000264010 TRIM9Q9C026 710 aa18.07■□□□□ 0.48
CTCF-201ENST00000264010 MKRN1Q9UHC7 482 aaKnown RBP18.07■□□□□ 0.48
CTCF-201ENST00000264010 ADGRG1Q9Y653 693 aa18.07■□□□□ 0.48
CTCF-201ENST00000264010 CACNB3P54284 484 aa18.06■□□□□ 0.48
CTCF-201ENST00000264010 CKAP4Q07065 602 aaKnown RBP18.06■□□□□ 0.48
CTCF-201ENST00000264010 TERF2Q15554 542 aa18.06■□□□□ 0.48
CTCF-201ENST00000264010 CLEC10AQ8IUN9 316 aa18.06■□□□□ 0.48
CTCF-201ENST00000264010 SLFN12Q8IYM2 578 aa18.06■□□□□ 0.48
CTCF-201ENST00000264010 VEZTQ9HBM0 779 aa18.06■□□□□ 0.48
CTCF-201ENST00000264010 ABHD10Q9NUJ1 306 aa18.06■□□□□ 0.48
CTCF-201ENST00000264010 USP17L10C9JJH3 530 aa18.06■□□□□ 0.48
CTCF-201ENST00000264010 TBX2Q13207 712 aaPredicted RBP18.06■□□□□ 0.48
CTCF-201ENST00000264010 NPY5RQ15761 445 aa18.06■□□□□ 0.48
CTCF-201ENST00000264010 GPR161Q8N6U8 529 aaKnown RBP18.06■□□□□ 0.48
CTCF-201ENST00000264010 DCAF4Q8WV16 495 aa18.06■□□□□ 0.48
CTCF-201ENST00000264010 FAM212AQ96EL1 285 aa18.06■□□□□ 0.48
CTCF-201ENST00000264010 MXD3Q9BW11 206 aa18.06■□□□□ 0.48
CTCF-201ENST00000264010 RIC8AQ9NPQ8 531 aa18.06■□□□□ 0.48
CTCF-201ENST00000264010 TACC1O75410 805 aa18.06■□□□□ 0.48
CTCF-201ENST00000264010 MCM3P25205 808 aa18.06■□□□□ 0.48
CTCF-201ENST00000264010 NCAPH2Q6IBW4 605 aa18.06■□□□□ 0.48
CTCF-201ENST00000264010 REXO1L1PQ8IX06 675 aa18.06■□□□□ 0.48
CTCF-201ENST00000264010 JAKMIP2Q96AA8 810 aa18.06■□□□□ 0.48
CTCF-201ENST00000264010 CRACR2AQ9BSW2 395 aa18.06■□□□□ 0.48
CTCF-201ENST00000264010 JADE2Q9NQC1 790 aa18.06■□□□□ 0.48
CTCF-201ENST00000264010 TDP2O95551 362 aa18.05■□□□□ 0.48
CTCF-201ENST00000264010 TNIP1Q15025 636 aa18.05■□□□□ 0.48
CTCF-201ENST00000264010 UNC13DQ70J99 1090 aa18.05■□□□□ 0.48
CTCF-201ENST00000264010 ACRBPQ8NEB7 543 aa18.05■□□□□ 0.48
CTCF-201ENST00000264010 HAUS4Q9H6D7 363 aa18.05■□□□□ 0.48
CTCF-201ENST00000264010 PVALEFA0A1B0GWK0 134 aa18.05■□□□□ 0.48
CTCF-201ENST00000264010 FAM26FQ5R3K3 315 aa18.05■□□□□ 0.48
CTCF-201ENST00000264010 C7orf25Q9BPX7 421 aa18.05■□□□□ 0.48
CTCF-201ENST00000264010 HSD3B7Q9H2F3 369 aa18.05■□□□□ 0.48
CTCF-201ENST00000264010 PANK4Q9NVE7 773 aa18.05■□□□□ 0.48
CTCF-201ENST00000264010 INTS13Q9NVM9 706 aa18.05■□□□□ 0.48
CTCF-201ENST00000264010 DNM3Q9UQ16 869 aa18.05■□□□□ 0.48
CTCF-201ENST00000264010 TIAM2Q8IVF5 1701 aa18.05■□□□□ 0.48
CTCF-201ENST00000264010 SHTN1A0MZ66 631 aa18.05■□□□□ 0.48
CTCF-201ENST00000264010 FOSP01100 380 aaPredicted RBP18.05■□□□□ 0.48
CTCF-201ENST00000264010 MTF1Q14872 753 aa18.05■□□□□ 0.48
CTCF-201ENST00000264010 TMEM179Q6ZVK1 233 aa18.05■□□□□ 0.48
CTCF-201ENST00000264010 GPBP1Q86WP2 473 aa18.05■□□□□ 0.48
CTCF-201ENST00000264010 GIMAP8Q8ND71 665 aaPredicted RBP18.05■□□□□ 0.48
CTCF-201ENST00000264010 TSGA10Q9BZW7 698 aa18.05■□□□□ 0.48
CTCF-201ENST00000264010 RIOX1Q9H6W3 641 aa18.05■□□□□ 0.48
CTCF-201ENST00000264010 MYO1AQ9UBC5 1043 aa18.05■□□□□ 0.48
CTCF-201ENST00000264010 NEBLO76041 1014 aa18.04■□□□□ 0.48
CTCF-201ENST00000264010 SRGNP10124 158 aa18.04■□□□□ 0.48
CTCF-201ENST00000264010 PSMD2Q13200 908 aa18.04■□□□□ 0.48
CTCF-201ENST00000264010 CDC37Q16543 378 aaPredicted RBP18.04■□□□□ 0.48
CTCF-201ENST00000264010 TTBK2Q6IQ55 1244 aa18.04■□□□□ 0.48
CTCF-201ENST00000264010 POTEMA6NI47 508 aa18.04■□□□□ 0.48
CTCF-201ENST00000264010 GBP2P32456 591 aaPredicted RBP18.04■□□□□ 0.48
CTCF-201ENST00000264010 PDIA5Q14554 519 aa18.04■□□□□ 0.48
CTCF-201ENST00000264010 PRR16Q569H4 304 aa18.04■□□□□ 0.48
CTCF-201ENST00000264010 TCERG1LQ5VWI1 586 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms