RNA–Protein interactions for RNA: ENST00000262675.11

TTC39A-201, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39A, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-201ENST00000262675 PPP4R3BQ5MIZ7 849 aa11□□□□□ -0.65
TTC39A-201ENST00000262675 MAMDC4Q6UXC1 1216 aa11□□□□□ -0.65
TTC39A-201ENST00000262675 ANKRD33Q7Z3H0 272 aa11□□□□□ -0.65
TTC39A-201ENST00000262675 PRPF38AQ8NAV1 312 aaKnown RBP11□□□□□ -0.65
TTC39A-201ENST00000262675 SYMPKQ92797 1274 aaKnown RBP11□□□□□ -0.65
TTC39A-201ENST00000262675 TMEM87BQ96K49 555 aa11□□□□□ -0.65
TTC39A-201ENST00000262675 SLF1Q9BQI6 1058 aa11□□□□□ -0.65
TTC39A-201ENST00000262675 SPC25Q9HBM1 224 aa11□□□□□ -0.65
TTC39A-201ENST00000262675 FDPSP14324 419 aaKnown RBP10.99□□□□□ -0.65
TTC39A-201ENST00000262675 RAG1P15918 1043 aa10.99□□□□□ -0.65
TTC39A-201ENST00000262675 GNAT2P19087 354 aa10.99□□□□□ -0.65
TTC39A-201ENST00000262675 ME1P48163 572 aa10.99□□□□□ -0.65
TTC39A-201ENST00000262675 FPGSQ05932 587 aa10.99□□□□□ -0.65
TTC39A-201ENST00000262675 IQCB1Q15051 598 aa10.99□□□□□ -0.65
TTC39A-201ENST00000262675 PRAMEF19Q5SWL8 479 aa10.99□□□□□ -0.65
TTC39A-201ENST00000262675 CTR9Q6PD62 1173 aa10.99□□□□□ -0.65
TTC39A-201ENST00000262675 CEP57L1Q8IYX8 460 aa10.99□□□□□ -0.65
TTC39A-201ENST00000262675 PCSK9Q8NBP7 692 aaKnown RBP10.99□□□□□ -0.65
TTC39A-201ENST00000262675 ZNF830Q96NB3 372 aaPredicted RBP10.99□□□□□ -0.65
TTC39A-201ENST00000262675 CDX2Q99626 313 aaPredicted RBP10.99□□□□□ -0.65
TTC39A-201ENST00000262675 BPIFA3Q9BQP9 254 aa10.99□□□□□ -0.65
TTC39A-201ENST00000262675 MTA3Q9BTC8 594 aa10.99□□□□□ -0.65
TTC39A-201ENST00000262675 SEZ6LQ9BYH1 1024 aa10.99□□□□□ -0.65
TTC39A-201ENST00000262675 ZNF214Q9UL59 606 aaPredicted RBP10.99□□□□□ -0.65
TTC39A-201ENST00000262675 KLF18A0A0U1RQI7 1052 aa10.99□□□□□ -0.65
TTC39A-201ENST00000262675 A0A1W2PQ45 241 aaPredicted RBP10.99□□□□□ -0.65
TTC39A-201ENST00000262675 A0A1W2PQY0 241 aa10.99□□□□□ -0.65
TTC39A-201ENST00000262675 TRIM43BA6NCK2 446 aa10.99□□□□□ -0.65
TTC39A-201ENST00000262675 BECN2A8MW95 431 aa10.99□□□□□ -0.65
TTC39A-201ENST00000262675 PRKAB2O43741 272 aa10.99□□□□□ -0.65
TTC39A-201ENST00000262675 ZBED4O75132 1171 aa10.99□□□□□ -0.65
TTC39A-201ENST00000262675 ZNF865P0CJ78 1059 aaPredicted RBP10.99□□□□□ -0.65
TTC39A-201ENST00000262675 CST5P28325 142 aaPredicted RBP10.99□□□□□ -0.65
TTC39A-201ENST00000262675 OAZ1P54368 228 aa10.99□□□□□ -0.65
TTC39A-201ENST00000262675 ANO1Q5XXA6 986 aa10.99□□□□□ -0.65
TTC39A-201ENST00000262675 SYNE3Q6ZMZ3 975 aa10.99□□□□□ -0.65
TTC39A-201ENST00000262675 DRC7Q8IY82 874 aa10.99□□□□□ -0.65
TTC39A-201ENST00000262675 LINC00301Q8NCQ3 95 aa10.99□□□□□ -0.65
TTC39A-201ENST00000262675 REPS2Q8NFH8 660 aa10.99□□□□□ -0.65
TTC39A-201ENST00000262675 MAFAQ8NHW3 353 aaPredicted RBP10.99□□□□□ -0.65
TTC39A-201ENST00000262675 FERMT2Q96AC1 680 aa10.99□□□□□ -0.65
TTC39A-201ENST00000262675 TRIM43Q96BQ3 446 aaPredicted RBP10.99□□□□□ -0.65
TTC39A-201ENST00000262675 RNPC3Q96LT9 517 aaKnown RBP10.99□□□□□ -0.65
TTC39A-201ENST00000262675 COL25A1Q9BXS0 654 aaPredicted RBP10.99□□□□□ -0.65
TTC39A-201ENST00000262675 DNAJC25Q9H1X3 360 aa10.99□□□□□ -0.65
TTC39A-201ENST00000262675 KCNF1Q9H3M0 494 aa10.99□□□□□ -0.65
TTC39A-201ENST00000262675 MKNK2Q9HBH9 465 aa10.99□□□□□ -0.65
TTC39A-201ENST00000262675 NAP1L2Q9ULW6 460 aaPredicted RBP10.99□□□□□ -0.65
TTC39A-201ENST00000262675 GOLGA8BA8MQT2 603 aa10.98□□□□□ -0.65
TTC39A-201ENST00000262675 FOXP2O15409 715 aa10.98□□□□□ -0.65
TTC39A-201ENST00000262675 DUSP11O75319 330 aaKnown RBP10.98□□□□□ -0.65
TTC39A-201ENST00000262675 STK38Q15208 465 aa10.98□□□□□ -0.65
TTC39A-201ENST00000262675 SF3A1Q15459 793 aaKnown RBP10.98□□□□□ -0.65
TTC39A-201ENST00000262675 ZRSR1Q15695 479 aaKnown RBP10.98□□□□□ -0.65
TTC39A-201ENST00000262675 FAM83BQ5T0W9 1011 aa10.98□□□□□ -0.65
TTC39A-201ENST00000262675 FSIP1Q8NA03 581 aa10.98□□□□□ -0.65
TTC39A-201ENST00000262675 CHST13Q8NET6 341 aa10.98□□□□□ -0.65
TTC39A-201ENST00000262675 PUS7LQ9H0K6 701 aaKnown RBP10.98□□□□□ -0.65
TTC39A-201ENST00000262675 NCOA5Q9HCD5 579 aaKnown RBP10.98□□□□□ -0.65
TTC39A-201ENST00000262675 STARD7Q9NQZ5 370 aa10.98□□□□□ -0.65
TTC39A-201ENST00000262675 TMEM39AQ9NV64 488 aa10.98□□□□□ -0.65
TTC39A-201ENST00000262675 ORC3Q9UBD5 711 aaPredicted RBP10.98□□□□□ -0.65
TTC39A-201ENST00000262675 SMCHD1A6NHR9 2005 aa10.98□□□□□ -0.65
TTC39A-201ENST00000262675 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.97□□□□□ -0.65
TTC39A-201ENST00000262675 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.97□□□□□ -0.65
TTC39A-201ENST00000262675 DTNBO60941 627 aa10.97□□□□□ -0.65
TTC39A-201ENST00000262675 ADAMTS4O75173 837 aa10.97□□□□□ -0.65
TTC39A-201ENST00000262675 C9orf50Q5SZB4 431 aa10.97□□□□□ -0.65
TTC39A-201ENST00000262675 MYSM1Q5VVJ2 828 aa10.97□□□□□ -0.65
TTC39A-201ENST00000262675 SAMD1Q6SPF0 538 aaPredicted RBP10.97□□□□□ -0.65
TTC39A-201ENST00000262675 FMR1NBQ8N0W7 255 aaPredicted RBP10.97□□□□□ -0.65
TTC39A-201ENST00000262675 SPC24Q8NBT2 197 aa10.97□□□□□ -0.65
TTC39A-201ENST00000262675 TIGD1Q96MW7 591 aa10.97□□□□□ -0.65
TTC39A-201ENST00000262675 CLIP2Q9UDT6 1046 aa10.97□□□□□ -0.65
TTC39A-201ENST00000262675 FEM1BQ9UK73 627 aa10.97□□□□□ -0.65
TTC39A-201ENST00000262675 PCDHA7Q9UN72 937 aa10.97□□□□□ -0.65
TTC39A-201ENST00000262675 DNAJC25-GNG10A0A024R161 153 aa10.97□□□□□ -0.65
TTC39A-201ENST00000262675 SPTLC2O15270 562 aa10.97□□□□□ -0.65
TTC39A-201ENST00000262675 TLR3O15455 904 aaKnown RBP10.97□□□□□ -0.65
TTC39A-201ENST00000262675 PGK2P07205 417 aa10.97□□□□□ -0.65
TTC39A-201ENST00000262675 FOSL2P15408 326 aa10.97□□□□□ -0.65
TTC39A-201ENST00000262675 ACLYP53396 1101 aa10.97□□□□□ -0.65
TTC39A-201ENST00000262675 TPM4P67936 248 aa10.97□□□□□ -0.65
TTC39A-201ENST00000262675 EVX2Q03828 476 aa10.97□□□□□ -0.65
TTC39A-201ENST00000262675 PPIGQ13427 754 aaKnown RBP eCLIP10.97□□□□□ -0.65
TTC39A-201ENST00000262675 SNRNP48Q6IEG0 339 aaKnown RBP10.97□□□□□ -0.65
TTC39A-201ENST00000262675 CCDC186Q7Z3E2 898 aa10.97□□□□□ -0.65
TTC39A-201ENST00000262675 KLHDC9Q8NEP7 349 aa10.97□□□□□ -0.65
TTC39A-201ENST00000262675 MKL1Q969V6 931 aa10.97□□□□□ -0.65
TTC39A-201ENST00000262675 GLT1D1Q96MS3 346 aa10.97□□□□□ -0.65
TTC39A-201ENST00000262675 ABHD16BQ9H3Z7 469 aa10.97□□□□□ -0.65
TTC39A-201ENST00000262675 CNNM2Q9H8M5 875 aa10.97□□□□□ -0.65
TTC39A-201ENST00000262675 FBXO28Q9NVF7 368 aa10.97□□□□□ -0.65
TTC39A-201ENST00000262675 MYH4Q9Y623 1939 aa10.96□□□□□ -0.65
TTC39A-201ENST00000262675 F5H6K3 240 aa10.96□□□□□ -0.65
TTC39A-201ENST00000262675 RAD21O60216 631 aa10.96□□□□□ -0.65
TTC39A-201ENST00000262675 PGK1P00558 417 aa10.96□□□□□ -0.65
TTC39A-201ENST00000262675 TIMP1P01033 207 aa10.96□□□□□ -0.65
TTC39A-201ENST00000262675 SLC3A2P08195 630 aaKnown RBP10.96□□□□□ -0.65
TTC39A-201ENST00000262675 RCAN1P53805 252 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms