RNA–Protein interactions for RNA: ENST00000262544.6

SEC23B-201, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SEC23B, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-201ENST00000262544 EHD4Q9H223 541 aa14.39□□□□□ -0.11
SEC23B-201ENST00000262544 MAP2K7O14733 419 aa14.39□□□□□ -0.11
SEC23B-201ENST00000262544 ZNF263O14978 683 aa14.39□□□□□ -0.11
SEC23B-201ENST00000262544 DPP8Q6V1X1 898 aaPredicted RBP14.39□□□□□ -0.11
SEC23B-201ENST00000262544 CNBD1Q8NA66 436 aa14.39□□□□□ -0.11
SEC23B-201ENST00000262544 PYM1Q9BRP8 204 aaKnown RBP14.39□□□□□ -0.11
SEC23B-201ENST00000262544 LRRC1Q9BTT6 524 aa14.39□□□□□ -0.11
SEC23B-201ENST00000262544 KBTBD4Q9NVX7 518 aa14.39□□□□□ -0.11
SEC23B-201ENST00000262544 NID2Q14112 1375 aa14.39□□□□□ -0.11
SEC23B-201ENST00000262544 SHANK3Q9BYB0 1731 aa14.39□□□□□ -0.11
SEC23B-201ENST00000262544 POTEB2H3BUK9 544 aa14.38□□□□□ -0.11
SEC23B-201ENST00000262544 FTCDO95954 541 aa14.38□□□□□ -0.11
SEC23B-201ENST00000262544 EPS15P42566 896 aa14.38□□□□□ -0.11
SEC23B-201ENST00000262544 CLEC4GQ6UXB4 293 aa14.38□□□□□ -0.11
SEC23B-201ENST00000262544 SLC30A10Q6XR72 485 aa14.38□□□□□ -0.11
SEC23B-201ENST00000262544 DMGDHQ9UI17 866 aaKnown RBP14.38□□□□□ -0.11
SEC23B-201ENST00000262544 ABCA3Q99758 1704 aa14.38□□□□□ -0.11
SEC23B-201ENST00000262544 RASSF10A6NK89 507 aa14.38□□□□□ -0.11
SEC23B-201ENST00000262544 RHOBTB3O94955 611 aa14.38□□□□□ -0.11
SEC23B-201ENST00000262544 GNA11P29992 359 aa14.38□□□□□ -0.11
SEC23B-201ENST00000262544 AMPD2Q01433 879 aa14.38□□□□□ -0.11
SEC23B-201ENST00000262544 TRAPPC11Q7Z392 1133 aa14.38□□□□□ -0.11
SEC23B-201ENST00000262544 CERS3Q8IU89 383 aa14.38□□□□□ -0.11
SEC23B-201ENST00000262544 GBP3Q9H0R5 595 aa14.38□□□□□ -0.11
SEC23B-201ENST00000262544 NDST4Q9H3R1 872 aa14.38□□□□□ -0.11
SEC23B-201ENST00000262544 PDS5AQ29RF7 1337 aaKnown RBP14.38□□□□□ -0.11
SEC23B-201ENST00000262544 DUOX1Q9NRD9 1551 aa14.38□□□□□ -0.11
SEC23B-201ENST00000262544 ZSCAN5CA6NGD5 496 aaPredicted RBP14.38□□□□□ -0.11
SEC23B-201ENST00000262544 MEIS1O00470 390 aa14.38□□□□□ -0.11
SEC23B-201ENST00000262544 SRGNP10124 158 aa14.38□□□□□ -0.11
SEC23B-201ENST00000262544 MAGEA1P43355 309 aa14.38□□□□□ -0.11
SEC23B-201ENST00000262544 KIF11P52732 1056 aa14.38□□□□□ -0.11
SEC23B-201ENST00000262544 MUM1L1Q5H9M0 696 aa14.38□□□□□ -0.11
SEC23B-201ENST00000262544 ZNF507Q8TCN5 953 aa14.38□□□□□ -0.11
SEC23B-201ENST00000262544 NYXQ9GZU5 481 aa14.38□□□□□ -0.11
SEC23B-201ENST00000262544 THAP9Q9H5L6 903 aa14.38□□□□□ -0.11
SEC23B-201ENST00000262544 BICDL2A1A5D9 508 aa14.37□□□□□ -0.11
SEC23B-201ENST00000262544 USP17L15C9J2P7 530 aa14.37□□□□□ -0.11
SEC23B-201ENST00000262544 USP17L13C9JLJ4 530 aa14.37□□□□□ -0.11
SEC23B-201ENST00000262544 USP17L11C9JVI0 530 aa14.37□□□□□ -0.11
SEC23B-201ENST00000262544 USP17L18D6R9N7 530 aa14.37□□□□□ -0.11
SEC23B-201ENST00000262544 USP17L22D6RA61 530 aa14.37□□□□□ -0.11
SEC23B-201ENST00000262544 USP17L17D6RBQ6 530 aa14.37□□□□□ -0.11
SEC23B-201ENST00000262544 USP17L19D6RCP7 530 aa14.37□□□□□ -0.11
SEC23B-201ENST00000262544 USP17L20D6RJB6 530 aa14.37□□□□□ -0.11
SEC23B-201ENST00000262544 G3V3G9 751 aa14.37□□□□□ -0.11
SEC23B-201ENST00000262544 ATP8B1O43520 1251 aa14.37□□□□□ -0.11
SEC23B-201ENST00000262544 USO1O60763 962 aaKnown RBP14.37□□□□□ -0.11
SEC23B-201ENST00000262544 ACTN2P35609 894 aa14.37□□□□□ -0.11
SEC23B-201ENST00000262544 GUCY2FP51841 1108 aa14.37□□□□□ -0.11
SEC23B-201ENST00000262544 USP17L24Q0WX57 530 aa14.37□□□□□ -0.11
SEC23B-201ENST00000262544 SF3A3Q12874 501 aaKnown RBP eCLIP14.37□□□□□ -0.112e-6■□□□□ 8.4
SEC23B-201ENST00000262544 RAPGEF1Q13905 1077 aa14.37□□□□□ -0.11
SEC23B-201ENST00000262544 DCAF8Q5TAQ9 597 aa14.37□□□□□ -0.11
SEC23B-201ENST00000262544 USP17L6PQ6QN14 398 aa14.37□□□□□ -0.11
SEC23B-201ENST00000262544 WDR66Q8TBY9 1149 aa14.37□□□□□ -0.11
SEC23B-201ENST00000262544 DDX12PQ92771 950 aa14.37□□□□□ -0.11
SEC23B-201ENST00000262544 FAM107BQ9H098 131 aa14.37□□□□□ -0.11
SEC23B-201ENST00000262544 ARHGAP20Q9P2F6 1191 aa14.37□□□□□ -0.11
SEC23B-201ENST00000262544 USP14P54578 494 aa14.37□□□□□ -0.11
SEC23B-201ENST00000262544 ZBED6P86452 979 aa14.37□□□□□ -0.11
SEC23B-201ENST00000262544 AMPD3Q01432 767 aa14.37□□□□□ -0.11
SEC23B-201ENST00000262544 SHROOM1Q2M3G4 852 aaPredicted RBP14.37□□□□□ -0.11
SEC23B-201ENST00000262544 TCERG1LQ5VWI1 586 aa14.37□□□□□ -0.11
SEC23B-201ENST00000262544 KRT79Q5XKE5 535 aa14.37□□□□□ -0.11
SEC23B-201ENST00000262544 TMED8Q6PL24 325 aaPredicted RBP14.37□□□□□ -0.11
SEC23B-201ENST00000262544 FAM196AQ6ZSG2 479 aa14.37□□□□□ -0.11
SEC23B-201ENST00000262544 ZNF804AQ7Z570 1209 aa14.37□□□□□ -0.11
SEC23B-201ENST00000262544 ZSCAN29Q8IWY8 852 aaPredicted RBP14.37□□□□□ -0.11
SEC23B-201ENST00000262544 MSANTD4Q8NCY6 345 aa14.37□□□□□ -0.11
SEC23B-201ENST00000262544 LARP4BQ92615 738 aaKnown RBP14.37□□□□□ -0.11
SEC23B-201ENST00000262544 DNAJC7Q99615 494 aa14.37□□□□□ -0.11
SEC23B-201ENST00000262544 SELENOOQ9BVL4 669 aa14.37□□□□□ -0.11
SEC23B-201ENST00000262544 ACBD3Q9H3P7 528 aa14.37□□□□□ -0.11
SEC23B-201ENST00000262544 PCDHA13Q9Y5I0 950 aa14.37□□□□□ -0.11
SEC23B-201ENST00000262544 E9PMD0 336 aa14.36□□□□□ -0.11
SEC23B-201ENST00000262544 PCP11498 1178 aaKnown RBP14.36□□□□□ -0.11
SEC23B-201ENST00000262544 STAT3P40763 770 aa14.36□□□□□ -0.11
SEC23B-201ENST00000262544 ATP1A2P50993 1020 aa14.36□□□□□ -0.11
SEC23B-201ENST00000262544 POLR2FP61218 127 aaKnown RBP14.36□□□□□ -0.11
SEC23B-201ENST00000262544 GPSM2P81274 684 aa14.36□□□□□ -0.11
SEC23B-201ENST00000262544 DOK7Q18PE1 504 aa14.36□□□□□ -0.11
SEC23B-201ENST00000262544 CNNM4Q6P4Q7 775 aa14.36□□□□□ -0.11
SEC23B-201ENST00000262544 FGFBP2Q9BYJ0 223 aa14.36□□□□□ -0.11
SEC23B-201ENST00000262544 CWC15Q9P013 229 aaKnown RBP14.36□□□□□ -0.11
SEC23B-201ENST00000262544 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.36□□□□□ -0.11
SEC23B-201ENST00000262544 MYO1CO00159 1063 aa14.36□□□□□ -0.11
SEC23B-201ENST00000262544 TACC1O75410 805 aa14.36□□□□□ -0.11
SEC23B-201ENST00000262544 FGRP09769 529 aa14.36□□□□□ -0.11
SEC23B-201ENST00000262544 SLC1A4P43007 532 aa14.36□□□□□ -0.11
SEC23B-201ENST00000262544 RBM5P52756 815 aaKnown RBP eCLIP14.36□□□□□ -0.11
SEC23B-201ENST00000262544 TMEM266Q2M3C6 531 aa14.36□□□□□ -0.11
SEC23B-201ENST00000262544 CCDC70Q6NSX1 233 aa14.36□□□□□ -0.11
SEC23B-201ENST00000262544 KRT25Q7Z3Z0 450 aa14.36□□□□□ -0.11
SEC23B-201ENST00000262544 EXOC4Q96A65 974 aa14.36□□□□□ -0.11
SEC23B-201ENST00000262544 MMTAG2Q9BU76 263 aaKnown RBP14.36□□□□□ -0.11
SEC23B-201ENST00000262544 UBXN6Q9BZV1 441 aa14.36□□□□□ -0.11
SEC23B-201ENST00000262544 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.36□□□□□ -0.11
SEC23B-201ENST00000262544 AKR1B1P15121 316 aa14.36□□□□□ -0.11
SEC23B-201ENST00000262544 MIIPQ5JXC2 388 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms