RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 TSKSQ9UJT2 592 aa9.12□□□□□ -0.95
PTPN3-201ENST00000262539 UQCRHLA0A096LP55 91 aa9.12□□□□□ -0.95
PTPN3-201ENST00000262539 SPDYE2BA6NHP3 402 aa9.12□□□□□ -0.95
PTPN3-201ENST00000262539 SPDYE6P0CI01 402 aa9.12□□□□□ -0.95
PTPN3-201ENST00000262539 AKR1B1P15121 316 aa9.12□□□□□ -0.95
PTPN3-201ENST00000262539 KCNQ4P56696 695 aa9.12□□□□□ -0.95
PTPN3-201ENST00000262539 PDE4DQ08499 809 aa9.12□□□□□ -0.95
PTPN3-201ENST00000262539 TMX2Q9Y320 296 aa9.12□□□□□ -0.95
PTPN3-201ENST00000262539 SFNP31947 248 aa9.12□□□□□ -0.95
PTPN3-201ENST00000262539 DPY19L2Q6NUT2 758 aa9.12□□□□□ -0.95
PTPN3-201ENST00000262539 CSGALNACT2Q8N6G5 542 aa9.12□□□□□ -0.95
PTPN3-201ENST00000262539 NACC1Q96RE7 527 aa9.12□□□□□ -0.95
PTPN3-201ENST00000262539 PCDHB6Q9Y5E3 794 aa9.12□□□□□ -0.95
PTPN3-201ENST00000262539 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.12□□□□□ -0.95
PTPN3-201ENST00000262539 GOLGA6L10A0A0M3HER8 536 aa9.12□□□□□ -0.95
PTPN3-201ENST00000262539 USP17L5A8MUK1 530 aa9.12□□□□□ -0.95
PTPN3-201ENST00000262539 RHOBTB3O94955 611 aa9.12□□□□□ -0.95
PTPN3-201ENST00000262539 KRT76Q01546 638 aa9.12□□□□□ -0.95
PTPN3-201ENST00000262539 EDRF1Q3B7T1 1238 aa9.12□□□□□ -0.95
PTPN3-201ENST00000262539 FIGNQ5HY92 759 aa9.12□□□□□ -0.95
PTPN3-201ENST00000262539 TATDN1Q6P1N9 297 aa9.12□□□□□ -0.95
PTPN3-201ENST00000262539 APBB1IPQ7Z5R6 666 aaPredicted RBP9.12□□□□□ -0.95
PTPN3-201ENST00000262539 TBCKQ8TEA7 893 aa9.12□□□□□ -0.95
PTPN3-201ENST00000262539 ATP6V0A1Q93050 837 aa9.12□□□□□ -0.95
PTPN3-201ENST00000262539 DYNLL2Q96FJ2 89 aa9.12□□□□□ -0.95
PTPN3-201ENST00000262539 NBPF3Q9H094 633 aa9.12□□□□□ -0.95
PTPN3-201ENST00000262539 DBNDD1Q9H9R9 158 aa9.12□□□□□ -0.95
PTPN3-201ENST00000262539 GPCPD1Q9NPB8 672 aa9.12□□□□□ -0.95
PTPN3-201ENST00000262539 CKAP4Q07065 602 aaKnown RBP9.12□□□□□ -0.95
PTPN3-201ENST00000262539 SNW1Q13573 536 aaKnown RBP9.12□□□□□ -0.95
PTPN3-201ENST00000262539 DOK7Q18PE1 504 aa9.12□□□□□ -0.95
PTPN3-201ENST00000262539 SHC4Q6S5L8 630 aa9.12□□□□□ -0.95
PTPN3-201ENST00000262539 CCDC24Q8N4L8 307 aa9.12□□□□□ -0.95
PTPN3-201ENST00000262539 ALS2CR12Q96Q35 445 aa9.12□□□□□ -0.95
PTPN3-201ENST00000262539 ADD3Q9UEY8 706 aaKnown RBP9.12□□□□□ -0.95
PTPN3-201ENST00000262539 GLI3P10071 1580 aa9.11□□□□□ -0.95
PTPN3-201ENST00000262539 LONRF3Q496Y0 759 aa9.11□□□□□ -0.95
PTPN3-201ENST00000262539 VSTM4Q8IW00 320 aa9.11□□□□□ -0.95
PTPN3-201ENST00000262539 CCDC155Q8N6L0 562 aa9.11□□□□□ -0.95
PTPN3-201ENST00000262539 UBXN4Q92575 508 aa9.11□□□□□ -0.95
PTPN3-201ENST00000262539 PANX2Q96RD6 677 aa9.11□□□□□ -0.95
PTPN3-201ENST00000262539 CAMKK2Q96RR4 588 aa9.11□□□□□ -0.95
PTPN3-201ENST00000262539 ITIH6Q6UXX5 1313 aa9.11□□□□□ -0.95
PTPN3-201ENST00000262539 RPN1P04843 607 aaKnown RBP9.11□□□□□ -0.95
PTPN3-201ENST00000262539 BCRP11274 1271 aa9.11□□□□□ -0.95
PTPN3-201ENST00000262539 KRT13P13646 458 aa9.11□□□□□ -0.95
PTPN3-201ENST00000262539 CIITAP33076 1130 aa9.11□□□□□ -0.95
PTPN3-201ENST00000262539 SMC1AQ14683 1233 aaKnown RBP9.11□□□□□ -0.95
PTPN3-201ENST00000262539 SPDYE2Q495Y8 402 aa9.11□□□□□ -0.95
PTPN3-201ENST00000262539 OR8K1Q8NGG5 319 aa9.11□□□□□ -0.95
PTPN3-201ENST00000262539 C7orf25Q9BPX7 421 aa9.11□□□□□ -0.95
PTPN3-201ENST00000262539 BZW2Q9Y6E2 419 aaKnown RBP9.11□□□□□ -0.95
PTPN3-201ENST00000262539 SH3BP5O60239 455 aa9.11□□□□□ -0.95
PTPN3-201ENST00000262539 CYP2D6P10635 497 aa9.11□□□□□ -0.95
PTPN3-201ENST00000262539 LMBR1Q8WVP7 490 aa9.11□□□□□ -0.95
PTPN3-201ENST00000262539 CALUO43852 315 aaPredicted RBP9.11□□□□□ -0.95
PTPN3-201ENST00000262539 VIL1P09327 827 aaKnown RBP9.11□□□□□ -0.95
PTPN3-201ENST00000262539 HOXC6P09630 235 aa9.11□□□□□ -0.95
PTPN3-201ENST00000262539 ETF1P62495 437 aaKnown RBP9.11□□□□□ -0.95
PTPN3-201ENST00000262539 QRICH1Q2TAL8 776 aa9.11□□□□□ -0.95
PTPN3-201ENST00000262539 TDRD12Q587J7 1177 aaKnown RBP9.11□□□□□ -0.95
PTPN3-201ENST00000262539 APOBEC3HQ6NTF7 200 aaKnown RBP9.11□□□□□ -0.95
PTPN3-201ENST00000262539 TEKT3Q9BXF9 490 aa9.11□□□□□ -0.95
PTPN3-201ENST00000262539 STXBP3O00186 592 aa9.11□□□□□ -0.95
PTPN3-201ENST00000262539 AFMP43652 599 aa9.11□□□□□ -0.95
PTPN3-201ENST00000262539 JAK3P52333 1124 aa9.11□□□□□ -0.95
PTPN3-201ENST00000262539 HVCN1Q96D96 273 aa9.11□□□□□ -0.95
PTPN3-201ENST00000262539 TBC1D7Q9P0N9 293 aa9.11□□□□□ -0.95
PTPN3-201ENST00000262539 UBE4BO95155 1302 aa9.11□□□□□ -0.95
PTPN3-201ENST00000262539 ZC3H4Q9UPT8 1303 aaKnown RBP9.11□□□□□ -0.95
PTPN3-201ENST00000262539 PKN1Q16512 942 aa9.11□□□□□ -0.95
PTPN3-201ENST00000262539 SH3RF1Q7Z6J0 888 aa9.11□□□□□ -0.95
PTPN3-201ENST00000262539 PLA2G4DQ86XP0 818 aa9.11□□□□□ -0.95
PTPN3-201ENST00000262539 PROCA1Q8NCQ7 364 aaPredicted RBP9.11□□□□□ -0.95
PTPN3-201ENST00000262539 ZNF70Q9UC06 446 aaPredicted RBP9.11□□□□□ -0.95
PTPN3-201ENST00000262539 CSADQ9Y600 493 aa9.11□□□□□ -0.95
PTPN3-201ENST00000262539 CYP2D7A0A087X1C5 515 aa9.1□□□□□ -0.95
PTPN3-201ENST00000262539 SMTNP53814 917 aa9.1□□□□□ -0.95
PTPN3-201ENST00000262539 ADGRA1Q86SQ6 560 aa9.1□□□□□ -0.95
PTPN3-201ENST00000262539 METTL16Q86W50 562 aaKnown RBP9.1□□□□□ -0.95
PTPN3-201ENST00000262539 PPM1EQ8WY54 764 aa9.1□□□□□ -0.95
PTPN3-201ENST00000262539 P2RX5Q93086 422 aa9.1□□□□□ -0.95
PTPN3-201ENST00000262539 TSGA10Q9BZW7 698 aa9.1□□□□□ -0.95
PTPN3-201ENST00000262539 DDX25Q9UHL0 483 aaKnown RBP9.1□□□□□ -0.95
PTPN3-201ENST00000262539 ABCA3Q99758 1704 aa9.1□□□□□ -0.95
PTPN3-201ENST00000262539 IGKV6D-41A0A0C4DH26 115 aa9.1□□□□□ -0.95
PTPN3-201ENST00000262539 CYP3A4P08684 503 aa9.1□□□□□ -0.95
PTPN3-201ENST00000262539 TXKP42681 527 aa9.1□□□□□ -0.95
PTPN3-201ENST00000262539 CCNA1P78396 465 aa9.1□□□□□ -0.95
PTPN3-201ENST00000262539 PPP2R5AQ15172 486 aa9.1□□□□□ -0.95
PTPN3-201ENST00000262539 SPAG5Q96R06 1193 aa9.1□□□□□ -0.95
PTPN3-201ENST00000262539 BAG1Q99933 345 aaPredicted RBP9.1□□□□□ -0.95
PTPN3-201ENST00000262539 MKNK1Q9BUB5 465 aa9.1□□□□□ -0.95
PTPN3-201ENST00000262539 SPON1Q9HCB6 807 aa9.1□□□□□ -0.95
PTPN3-201ENST00000262539 LIMA1Q9UHB6 759 aaKnown RBP9.1□□□□□ -0.95
PTPN3-201ENST00000262539 KIF28PB7ZC32 967 aa9.1□□□□□ -0.95
PTPN3-201ENST00000262539 ZBTB24O43167 697 aaPredicted RBP9.1□□□□□ -0.95
PTPN3-201ENST00000262539 AKR1B10O60218 316 aa9.1□□□□□ -0.95
PTPN3-201ENST00000262539 CCNT1O60563 726 aaKnown RBP9.1□□□□□ -0.95
PTPN3-201ENST00000262539 SCNN1DP51172 638 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms