RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 IGFBP4P22692 258 aa14.28□□□□□ -0.12
TRAF4-202ENST00000262396 TMEM63BQ5T3F8 832 aa14.28□□□□□ -0.12
TRAF4-202ENST00000262396 DEFB128Q7Z7B8 93 aa14.28□□□□□ -0.12
TRAF4-202ENST00000262396 ADGRF4Q8IZF3 695 aa14.28□□□□□ -0.12
TRAF4-202ENST00000262396 SLC43A3Q8NBI5 491 aa14.28□□□□□ -0.12
TRAF4-202ENST00000262396 NSUN6Q8TEA1 469 aaKnown RBP14.28□□□□□ -0.12
TRAF4-202ENST00000262396 HERVK_113Q902F9 699 aa14.28□□□□□ -0.12
TRAF4-202ENST00000262396 SCLYQ96I15 445 aa14.28□□□□□ -0.12
TRAF4-202ENST00000262396 NOC4LQ9BVI4 516 aaKnown RBP14.28□□□□□ -0.12
TRAF4-202ENST00000262396 PBX4Q9BYU1 374 aa14.28□□□□□ -0.12
TRAF4-202ENST00000262396 FTOQ9C0B1 505 aaKnown RBP eCLIP14.28□□□□□ -0.12
TRAF4-202ENST00000262396 TRMT13Q9NUP7 481 aaKnown RBP14.28□□□□□ -0.12
TRAF4-202ENST00000262396 CFBP00751 764 aa14.27□□□□□ -0.13
TRAF4-202ENST00000262396 CYP2C9P11712 490 aa14.27□□□□□ -0.13
TRAF4-202ENST00000262396 PBX2P40425 430 aa14.27□□□□□ -0.13
TRAF4-202ENST00000262396 PURAQ00577 322 aaKnown RBP14.27□□□□□ -0.13
TRAF4-202ENST00000262396 STXBP2Q15833 593 aa14.27□□□□□ -0.13
TRAF4-202ENST00000262396 C16orf59Q7L2K0 433 aa14.27□□□□□ -0.13
TRAF4-202ENST00000262396 RALYLQ86SE5 291 aaKnown RBP14.27□□□□□ -0.13
TRAF4-202ENST00000262396 CCDC155Q8N6L0 562 aa14.27□□□□□ -0.13
TRAF4-202ENST00000262396 RGS22Q8NE09 1264 aa14.27□□□□□ -0.13
TRAF4-202ENST00000262396 IL27Q8NEV9 243 aa14.27□□□□□ -0.13
TRAF4-202ENST00000262396 SYMPKQ92797 1274 aaKnown RBP14.27□□□□□ -0.13
TRAF4-202ENST00000262396 RMDN3Q96TC7 470 aa14.27□□□□□ -0.13
TRAF4-202ENST00000262396 COL25A1Q9BXS0 654 aaPredicted RBP14.27□□□□□ -0.13
TRAF4-202ENST00000262396 ZSWIM5Q9P217 1185 aa14.27□□□□□ -0.13
TRAF4-202ENST00000262396 COL6A3P12111 3177 aa14.26□□□□□ -0.13
TRAF4-202ENST00000262396 UMODL1Q5DID0 1318 aa14.26□□□□□ -0.13
TRAF4-202ENST00000262396 RBM47A0AV96 593 aaKnown RBP14.26□□□□□ -0.13
TRAF4-202ENST00000262396 GH1P01241 217 aa14.26□□□□□ -0.13
TRAF4-202ENST00000262396 EIF2AK2P19525 551 aaKnown RBP14.26□□□□□ -0.13
TRAF4-202ENST00000262396 TRAF1Q13077 416 aa14.26□□□□□ -0.13
TRAF4-202ENST00000262396 BFSP2Q13515 415 aa14.26□□□□□ -0.13
TRAF4-202ENST00000262396 SART3Q15020 963 aaKnown RBP14.26□□□□□ -0.13
TRAF4-202ENST00000262396 QRICH1Q2TAL8 776 aa14.26□□□□□ -0.13
TRAF4-202ENST00000262396 NBPF20Q3BBV1 942 aa14.26□□□□□ -0.13
TRAF4-202ENST00000262396 ENAHQ8N8S7 591 aaPredicted RBP14.26□□□□□ -0.13
TRAF4-202ENST00000262396 COPS5Q92905 334 aa14.26□□□□□ -0.13
TRAF4-202ENST00000262396 AMNQ9BXJ7 453 aa14.26□□□□□ -0.13
TRAF4-202ENST00000262396 NKX2-4Q9H2Z4 354 aa14.26□□□□□ -0.13
TRAF4-202ENST00000262396 PRDM12Q9H4Q4 367 aa14.26□□□□□ -0.13
TRAF4-202ENST00000262396 U3KPZ7 1027 aaPredicted RBP14.26□□□□□ -0.13
TRAF4-202ENST00000262396 GRIN2DO15399 1336 aa14.25□□□□□ -0.13
TRAF4-202ENST00000262396 PFKMP08237 780 aa14.25□□□□□ -0.13
TRAF4-202ENST00000262396 CASTP20810 708 aaKnown RBP14.25□□□□□ -0.13
TRAF4-202ENST00000262396 PPP2R2DQ66LE6 453 aa14.25□□□□□ -0.13
TRAF4-202ENST00000262396 HOMER1Q86YM7 354 aa14.25□□□□□ -0.13
TRAF4-202ENST00000262396 TAAR1Q96RJ0 339 aa14.25□□□□□ -0.13
TRAF4-202ENST00000262396 IWS1Q96ST2 819 aa14.25□□□□□ -0.13
TRAF4-202ENST00000262396 MAF1Q9H063 256 aa14.25□□□□□ -0.13
TRAF4-202ENST00000262396 TSPYL2Q9H2G4 693 aaPredicted RBP14.25□□□□□ -0.13
TRAF4-202ENST00000262396 SUPT16HQ9Y5B9 1047 aaKnown RBP14.25□□□□□ -0.13
TRAF4-202ENST00000262396 MRVI1Q9Y6F6 885 aa14.25□□□□□ -0.13
TRAF4-202ENST00000262396 KIF28PB7ZC32 967 aa14.24□□□□□ -0.13
TRAF4-202ENST00000262396 KLRF2D3W0D1 207 aa14.24□□□□□ -0.13
TRAF4-202ENST00000262396 IFIT3O14879 490 aaKnown RBP14.24□□□□□ -0.13
TRAF4-202ENST00000262396 MYCLP12524 364 aaPredicted RBP14.24□□□□□ -0.13
TRAF4-202ENST00000262396 ATP2A2P16615 1042 aaKnown RBP14.24□□□□□ -0.13
TRAF4-202ENST00000262396 EDNRBP24530 442 aa14.24□□□□□ -0.13
TRAF4-202ENST00000262396 RFC2P35250 354 aa14.24□□□□□ -0.13
TRAF4-202ENST00000262396 PTPN11Q06124 597 aaPredicted RBP14.24□□□□□ -0.13
TRAF4-202ENST00000262396 LY6KQ17RY6 165 aa14.24□□□□□ -0.13
TRAF4-202ENST00000262396 NFRKBQ6P4R8 1299 aa14.24□□□□□ -0.13
TRAF4-202ENST00000262396 MICALL1Q8N3F8 863 aa14.24□□□□□ -0.13
TRAF4-202ENST00000262396 SYTL5Q8TDW5 730 aaPredicted RBP14.24□□□□□ -0.13
TRAF4-202ENST00000262396 PPP1R13LQ8WUF5 828 aa14.24□□□□□ -0.13
TRAF4-202ENST00000262396 AFG1LQ8WV93 481 aa14.24□□□□□ -0.13
TRAF4-202ENST00000262396 ANKS1AQ92625 1134 aa14.24□□□□□ -0.13
TRAF4-202ENST00000262396 CXXC1Q9P0U4 656 aaPredicted RBP14.24□□□□□ -0.13
TRAF4-202ENST00000262396 A6NJR5 290 aa14.23□□□□□ -0.13
TRAF4-202ENST00000262396 KCNJ6P48051 423 aa14.23□□□□□ -0.13
TRAF4-202ENST00000262396 RABGGTBP53611 331 aa14.23□□□□□ -0.13
TRAF4-202ENST00000262396 CCDC85BQ15834 202 aaPredicted RBP14.23□□□□□ -0.13
TRAF4-202ENST00000262396 PTGISQ16647 500 aa14.23□□□□□ -0.13
TRAF4-202ENST00000262396 DGKDQ16760 1214 aa14.23□□□□□ -0.13
TRAF4-202ENST00000262396 DHX37Q8IY37 1157 aaKnown RBP14.23□□□□□ -0.13
TRAF4-202ENST00000262396 C7orf31Q8N865 590 aa14.23□□□□□ -0.13
TRAF4-202ENST00000262396 TBC1D5Q92609 795 aa14.23□□□□□ -0.13
TRAF4-202ENST00000262396 KATNAL1Q9BW62 490 aa14.23□□□□□ -0.13
TRAF4-202ENST00000262396 WNT8AQ9H1J5 351 aa14.23□□□□□ -0.13
TRAF4-202ENST00000262396 JMJD4Q9H9V9 463 aa14.23□□□□□ -0.13
TRAF4-202ENST00000262396 PCDHA1Q9Y5I3 950 aa14.23□□□□□ -0.13
TRAF4-202ENST00000262396 EIF3JO75822 258 aaKnown RBP14.22□□□□□ -0.13
TRAF4-202ENST00000262396 MMP3P08254 477 aa14.22□□□□□ -0.13
TRAF4-202ENST00000262396 WTAPQ15007 396 aa14.22□□□□□ -0.13
TRAF4-202ENST00000262396 SKIV2LQ15477 1246 aaKnown RBP14.22□□□□□ -0.13
TRAF4-202ENST00000262396 TMEM67Q5HYA8 995 aa14.22□□□□□ -0.13
TRAF4-202ENST00000262396 TTC22Q5TAA0 569 aa14.22□□□□□ -0.13
TRAF4-202ENST00000262396 RASIP1Q5U651 963 aa14.22□□□□□ -0.13
TRAF4-202ENST00000262396 CATIPQ7Z7H3 387 aa14.22□□□□□ -0.13
TRAF4-202ENST00000262396 ALG1Q9BT22 464 aa14.22□□□□□ -0.13
TRAF4-202ENST00000262396 ZBTB5O15062 677 aa14.21□□□□□ -0.13
TRAF4-202ENST00000262396 ARIH2O95376 493 aa14.21□□□□□ -0.13
TRAF4-202ENST00000262396 NR3C2P08235 984 aa14.21□□□□□ -0.13
TRAF4-202ENST00000262396 LAMC2Q13753 1193 aa14.21□□□□□ -0.13
TRAF4-202ENST00000262396 KCNV1Q6PIU1 500 aa14.21□□□□□ -0.13
TRAF4-202ENST00000262396 FCHSD1Q86WN1 690 aa14.21□□□□□ -0.13
TRAF4-202ENST00000262396 STAG2Q8N3U4 1231 aa14.21□□□□□ -0.13
TRAF4-202ENST00000262396 NCOA7Q8NI08 942 aa14.21□□□□□ -0.13
TRAF4-202ENST00000262396 ZBED2Q9BTP6 218 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms