RNA–Protein interactions for RNA: ENST00000261980.2

VSX2-201, Transcript of visual system homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX2, Length 2,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2-201ENST00000261980 ELOA2Q8IYF1 753 aaPredicted RBP18.24■□□□□ 0.51
VSX2-201ENST00000261980 FANCBQ8NB91 859 aa18.24■□□□□ 0.51
VSX2-201ENST00000261980 ZNF507Q8TCN5 953 aa18.24■□□□□ 0.51
VSX2-201ENST00000261980 CAVIN3Q969G5 261 aa18.24■□□□□ 0.51
VSX2-201ENST00000261980 CD2APQ9Y5K6 639 aa18.24■□□□□ 0.51
VSX2-201ENST00000261980 MYH13Q9UKX3 1938 aa18.23■□□□□ 0.51
VSX2-201ENST00000261980 BYSLQ13895 437 aaKnown RBP18.23■□□□□ 0.51
VSX2-201ENST00000261980 METTL24Q5JXM2 366 aa18.23■□□□□ 0.51
VSX2-201ENST00000261980 KSR1Q8IVT5 923 aa18.23■□□□□ 0.51
VSX2-201ENST00000261980 SPICE1Q8N0Z3 855 aa18.23■□□□□ 0.51
VSX2-201ENST00000261980 ATP6V0A4Q9HBG4 840 aa18.23■□□□□ 0.51
VSX2-201ENST00000261980 SPATS2LQ9NUQ6 558 aaKnown RBP18.23■□□□□ 0.51
VSX2-201ENST00000261980 PANK4Q9NVE7 773 aa18.23■□□□□ 0.51
VSX2-201ENST00000261980 GOLGB1Q14789 3259 aaKnown RBP18.23■□□□□ 0.51
VSX2-201ENST00000261980 KRT2P35908 639 aa18.23■□□□□ 0.51
VSX2-201ENST00000261980 HSD17B3P37058 310 aa18.23■□□□□ 0.51
VSX2-201ENST00000261980 IFNAR2P48551 515 aa18.23■□□□□ 0.51
VSX2-201ENST00000261980 AMOTQ4VCS5 1084 aa18.23■□□□□ 0.51
VSX2-201ENST00000261980 AP1ARQ63HQ0 302 aa18.23■□□□□ 0.51
VSX2-201ENST00000261980 CNOT6LQ96LI5 555 aaKnown RBP18.23■□□□□ 0.51
VSX2-201ENST00000261980 CWC25Q9NXE8 425 aaPredicted RBP18.23■□□□□ 0.51
VSX2-201ENST00000261980 SOS2Q07890 1332 aaPredicted RBP18.22■□□□□ 0.51
VSX2-201ENST00000261980 CFAP221Q4G0U5 840 aa18.22■□□□□ 0.51
VSX2-201ENST00000261980 GKAP1Q5VSY0 366 aaPredicted RBP18.22■□□□□ 0.51
VSX2-201ENST00000261980 ZNF654Q8IZM8 581 aa18.22■□□□□ 0.51
VSX2-201ENST00000261980 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.22■□□□□ 0.51
VSX2-201ENST00000261980 SLC39A2Q9NP94 309 aa18.22■□□□□ 0.51
VSX2-201ENST00000261980 H7C1D1 291 aa18.22■□□□□ 0.51
VSX2-201ENST00000261980 PALMO75781 387 aa18.22■□□□□ 0.51
VSX2-201ENST00000261980 TCP1P17987 556 aaKnown RBP18.22■□□□□ 0.51
VSX2-201ENST00000261980 ADD2P35612 726 aa18.22■□□□□ 0.51
VSX2-201ENST00000261980 BZW1Q7L1Q6 419 aaKnown RBP18.22■□□□□ 0.51
VSX2-201ENST00000261980 CUL5Q93034 780 aa18.22■□□□□ 0.51
VSX2-201ENST00000261980 SELENOSQ9BQE4 189 aa18.22■□□□□ 0.51
VSX2-201ENST00000261980 KDM6AO15550 1401 aaPredicted RBP18.21■□□□□ 0.51
VSX2-201ENST00000261980 ZBED6P86452 979 aa18.21■□□□□ 0.51
VSX2-201ENST00000261980 GNPTABQ3T906 1256 aa18.21■□□□□ 0.51
VSX2-201ENST00000261980 PDXDC2PQ6P474 469 aa18.21■□□□□ 0.51
VSX2-201ENST00000261980 MAGEB6Q8N7X4 407 aa18.21■□□□□ 0.51
VSX2-201ENST00000261980 LPIN2Q92539 896 aa18.21■□□□□ 0.51
VSX2-201ENST00000261980 IQSEC3Q9UPP2 1182 aaPredicted RBP18.21■□□□□ 0.51
VSX2-201ENST00000261980 LRRC53A6NM62 1247 aa18.21■□□□□ 0.51
VSX2-201ENST00000261980 TRAPPC3O43617 180 aa18.21■□□□□ 0.51
VSX2-201ENST00000261980 FCER1AP12319 257 aa18.21■□□□□ 0.51
VSX2-201ENST00000261980 SLC8A1P32418 973 aa18.21■□□□□ 0.51
VSX2-201ENST00000261980 DNM2P50570 870 aa18.21■□□□□ 0.51
VSX2-201ENST00000261980 MEA1Q16626 185 aa18.21■□□□□ 0.51
VSX2-201ENST00000261980 KRT71Q3SY84 523 aa18.21■□□□□ 0.51
VSX2-201ENST00000261980 CAPRIN2Q6IMN6 1127 aaKnown RBP18.21■□□□□ 0.51
VSX2-201ENST00000261980 IFNL3Q8IZI9 196 aa18.21■□□□□ 0.51
VSX2-201ENST00000261980 AGAP11Q8TF27 550 aa18.21■□□□□ 0.51
VSX2-201ENST00000261980 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.21■□□□□ 0.51
VSX2-201ENST00000261980 CCDC113Q9H0I3 377 aa18.21■□□□□ 0.51
VSX2-201ENST00000261980 NEUROG2Q9H2A3 272 aa18.21■□□□□ 0.51
VSX2-201ENST00000261980 ACTR5Q9H9F9 607 aaPredicted RBP18.21■□□□□ 0.51
VSX2-201ENST00000261980 CTNND1O60716 968 aaKnown RBP18.21■□□□□ 0.5
VSX2-201ENST00000261980 PDE6AP16499 860 aa18.21■□□□□ 0.5
VSX2-201ENST00000261980 KLHDC7AQ5VTJ3 777 aa18.21■□□□□ 0.5
VSX2-201ENST00000261980 SGMS1Q86VZ5 419 aa18.21■□□□□ 0.5
VSX2-201ENST00000261980 CCDC63Q8NA47 563 aa18.21■□□□□ 0.5
VSX2-201ENST00000261980 TANGO6Q9C0B7 1094 aa18.21■□□□□ 0.5
VSX2-201ENST00000261980 MTFR1LQ9H019 292 aa18.21■□□□□ 0.5
VSX2-201ENST00000261980 DPH5Q9H2P9 285 aa18.21■□□□□ 0.5
VSX2-201ENST00000261980 IRAK4Q9NWZ3 460 aa18.21■□□□□ 0.5
VSX2-201ENST00000261980 N4BP2Q86UW6 1770 aaPredicted RBP18.2■□□□□ 0.5
VSX2-201ENST00000261980 HMGB1P1B2RPK0 211 aaPredicted RBP18.2■□□□□ 0.5
VSX2-201ENST00000261980 GTPBP6O43824 516 aaPredicted RBP18.2■□□□□ 0.5
VSX2-201ENST00000261980 SNRPA1P09661 255 aaKnown RBP18.2■□□□□ 0.5
VSX2-201ENST00000261980 PHKA1P46020 1223 aa18.2■□□□□ 0.5
VSX2-201ENST00000261980 KCNJ2P63252 427 aa18.2■□□□□ 0.5
VSX2-201ENST00000261980 IRX1P78414 480 aaPredicted RBP18.2■□□□□ 0.5
VSX2-201ENST00000261980 ADSSL1Q8N142 457 aa18.2■□□□□ 0.5
VSX2-201ENST00000261980 SRGNP10124 158 aa18.2■□□□□ 0.5
VSX2-201ENST00000261980 CALRP27797 417 aaKnown RBP18.2■□□□□ 0.5
VSX2-201ENST00000261980 CDC37Q16543 378 aaPredicted RBP18.2■□□□□ 0.5
VSX2-201ENST00000261980 ANKRD40Q6AI12 368 aa18.2■□□□□ 0.5
VSX2-201ENST00000261980 ADAT2Q7Z6V5 191 aaKnown RBP18.2■□□□□ 0.5
VSX2-201ENST00000261980 TMBIM4Q9HC24 238 aa18.2■□□□□ 0.5
VSX2-201ENST00000261980 FBXL5Q9UKA1 691 aa18.2■□□□□ 0.5
VSX2-201ENST00000261980 CYP2D7A0A087X1C5 515 aa18.19■□□□□ 0.5
VSX2-201ENST00000261980 PSMA7O14818 248 aa18.19■□□□□ 0.5
VSX2-201ENST00000261980 ERVK-9P63128 1117 aa18.19■□□□□ 0.5
VSX2-201ENST00000261980 ZNF844Q08AG5 666 aa18.19■□□□□ 0.5
VSX2-201ENST00000261980 ZKSCAN8Q15776 578 aaPredicted RBP18.19■□□□□ 0.5
VSX2-201ENST00000261980 UAP1Q16222 522 aaPredicted RBP18.19■□□□□ 0.5
VSX2-201ENST00000261980 LRP10Q7Z4F1 713 aa18.19■□□□□ 0.5
VSX2-201ENST00000261980 PURBQ96QR8 312 aaKnown RBP18.19■□□□□ 0.5
VSX2-201ENST00000261980 LBHD1Q9BQE6 289 aaPredicted RBP18.19■□□□□ 0.5
VSX2-201ENST00000261980 CPSF2Q9P2I0 782 aaKnown RBP18.19■□□□□ 0.5
VSX2-201ENST00000261980 TRPC6Q9Y210 931 aa18.19■□□□□ 0.5
VSX2-201ENST00000261980 PDS5AQ29RF7 1337 aaKnown RBP18.19■□□□□ 0.5
VSX2-201ENST00000261980 ATXN2Q99700 1313 aaKnown RBP18.19■□□□□ 0.5
VSX2-201ENST00000261980 MRC1P22897 1456 aa18.19■□□□□ 0.5
VSX2-201ENST00000261980 PLCB4Q15147 1175 aa18.19■□□□□ 0.5
VSX2-201ENST00000261980 SAAL1Q96ER3 474 aa18.19■□□□□ 0.5
VSX2-201ENST00000261980 ZNF570Q96NI8 536 aa18.19■□□□□ 0.5
VSX2-201ENST00000261980 SPAG5Q96R06 1193 aa18.19■□□□□ 0.5
VSX2-201ENST00000261980 ELAC2Q9BQ52 826 aaKnown RBP18.19■□□□□ 0.5
VSX2-201ENST00000261980 DDX47Q9H0S4 455 aaKnown RBP18.19■□□□□ 0.5
VSX2-201ENST00000261980 SLC52A2Q9HAB3 445 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms