RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 RHOXF2BP0C7M4 288 aa25.18■■□□□ 1.62
MCF2L-201ENST00000261963 EIF6P56537 245 aaKnown RBP25.18■■□□□ 1.62
MCF2L-201ENST00000261963 ORC2Q13416 577 aaPredicted RBP25.18■■□□□ 1.62
MCF2L-201ENST00000261963 DPP8Q6V1X1 898 aaPredicted RBP25.18■■□□□ 1.62
MCF2L-201ENST00000261963 EFCAB13Q8IY85 973 aa25.18■■□□□ 1.62
MCF2L-201ENST00000261963 ZNF713Q8N859 430 aaPredicted RBP25.18■■□□□ 1.62
MCF2L-201ENST00000261963 RHOXF2Q9BQY4 288 aa25.18■■□□□ 1.62
MCF2L-201ENST00000261963 COA1Q9GZY4 146 aa25.18■■□□□ 1.62
MCF2L-201ENST00000261963 A0A1W2PQC6 194 aa25.18■■□□□ 1.62
MCF2L-201ENST00000261963 TTC26A0AVF1 554 aa25.18■■□□□ 1.62
MCF2L-201ENST00000261963 TUBBP07437 444 aa25.18■■□□□ 1.62
MCF2L-201ENST00000261963 VSNL1P62760 191 aa25.18■■□□□ 1.62
MCF2L-201ENST00000261963 STK4Q13043 487 aa25.18■■□□□ 1.62
MCF2L-201ENST00000261963 KIF4BQ2VIQ3 1234 aa25.18■■□□□ 1.62
MCF2L-201ENST00000261963 ASPRV1Q53RT3 343 aa25.18■■□□□ 1.62
MCF2L-201ENST00000261963 MYH8P13535 1937 aa25.18■■□□□ 1.62
MCF2L-201ENST00000261963 PPFIA4O75335 1185 aa25.17■■□□□ 1.62
MCF2L-201ENST00000261963 ARHGAP25P42331 645 aa25.17■■□□□ 1.62
MCF2L-201ENST00000261963 PDE4DQ08499 809 aa25.17■■□□□ 1.62
MCF2L-201ENST00000261963 LOC102724159A0A0B4J2E5 919 aa25.17■■□□□ 1.62
MCF2L-201ENST00000261963 ASIC1P78348 528 aa25.17■■□□□ 1.62
MCF2L-201ENST00000261963 PWP2Q15269 919 aaKnown RBP25.17■■□□□ 1.62
MCF2L-201ENST00000261963 TMC4Q7Z404 712 aa25.17■■□□□ 1.62
MCF2L-201ENST00000261963 CHP1Q99653 195 aa25.17■■□□□ 1.62
MCF2L-201ENST00000261963 FAM204AQ9H8W3 233 aa25.17■■□□□ 1.62
MCF2L-201ENST00000261963 EXOC1Q9NV70 894 aa25.17■■□□□ 1.62
MCF2L-201ENST00000261963 ATP6V0A2Q9Y487 856 aa25.17■■□□□ 1.62
MCF2L-201ENST00000261963 CPP00450 1065 aa25.16■■□□□ 1.62
MCF2L-201ENST00000261963 FCER1AP12319 257 aa25.16■■□□□ 1.62
MCF2L-201ENST00000261963 ZNF569Q5MCW4 686 aa25.16■■□□□ 1.62
MCF2L-201ENST00000261963 P2RX5Q93086 422 aa25.16■■□□□ 1.62
MCF2L-201ENST00000261963 MXD3Q9BW11 206 aa25.16■■□□□ 1.62
MCF2L-201ENST00000261963 SUGT1Q9Y2Z0 365 aa25.16■■□□□ 1.62
MCF2L-201ENST00000261963 CTAGE9A4FU28 777 aa25.16■■□□□ 1.62
MCF2L-201ENST00000261963 ANKRD65E5RJM6 399 aa25.16■■□□□ 1.62
MCF2L-201ENST00000261963 SLC37A4O43826 429 aa25.16■■□□□ 1.62
MCF2L-201ENST00000261963 CCNE1P24864 410 aa25.16■■□□□ 1.62
MCF2L-201ENST00000261963 TXKP42681 527 aa25.16■■□□□ 1.62
MCF2L-201ENST00000261963 CSGALNACT2Q8N6G5 542 aa25.16■■□□□ 1.62
MCF2L-201ENST00000261963 NOC3LQ8WTT2 800 aaKnown RBP25.16■■□□□ 1.62
MCF2L-201ENST00000261963 GPCPD1Q9NPB8 672 aa25.16■■□□□ 1.62
MCF2L-201ENST00000261963 TRPC5Q9UL62 973 aaPredicted RBP25.16■■□□□ 1.62
MCF2L-201ENST00000261963 ADCY7P51828 1080 aa25.15■■□□□ 1.62
MCF2L-201ENST00000261963 GRB10Q13322 594 aa25.15■■□□□ 1.62
MCF2L-201ENST00000261963 ANKRD40Q6AI12 368 aa25.15■■□□□ 1.62
MCF2L-201ENST00000261963 SUGP1Q8IWZ8 645 aaKnown RBP25.15■■□□□ 1.62
MCF2L-201ENST00000261963 TDP2O95551 362 aa25.15■■□□□ 1.62
MCF2L-201ENST00000261963 EEF2KMTQ96G04 330 aa25.15■■□□□ 1.62
MCF2L-201ENST00000261963 DNAJC7Q99615 494 aa25.15■■□□□ 1.62
MCF2L-201ENST00000261963 SLF1Q9BQI6 1058 aa25.15■■□□□ 1.62
MCF2L-201ENST00000261963 BLOC1S4Q9NUP1 217 aa25.15■■□□□ 1.62
MCF2L-201ENST00000261963 REXO2Q9Y3B8 237 aaKnown RBP25.15■■□□□ 1.62
MCF2L-201ENST00000261963 CTAGE15A4D2H0 777 aa25.14■■□□□ 1.62
MCF2L-201ENST00000261963 CTAGE8P0CG41 777 aa25.14■■□□□ 1.62
MCF2L-201ENST00000261963 CALCRLQ16602 461 aa25.14■■□□□ 1.62
MCF2L-201ENST00000261963 CTAGE6Q86UF2 777 aa25.14■■□□□ 1.62
MCF2L-201ENST00000261963 CTAGE4Q8IX94 777 aa25.14■■□□□ 1.62
MCF2L-201ENST00000261963 MAGEC2Q9UBF1 373 aaPredicted RBP25.14■■□□□ 1.62
MCF2L-201ENST00000261963 B4DLN1 442 aa25.14■■□□□ 1.61
MCF2L-201ENST00000261963 SRGNP10124 158 aa25.14■■□□□ 1.61
MCF2L-201ENST00000261963 SHMT1P34896 483 aa25.14■■□□□ 1.61
MCF2L-201ENST00000261963 FXR2P51116 673 aaKnown RBP eCLIP25.14■■□□□ 1.61
MCF2L-201ENST00000261963 ZNF543Q08ER8 600 aa25.14■■□□□ 1.61
MCF2L-201ENST00000261963 DNAJC21Q5F1R6 531 aaKnown RBP25.14■■□□□ 1.61
MCF2L-201ENST00000261963 SLC35F6Q8N357 371 aa25.14■■□□□ 1.61
MCF2L-201ENST00000261963 KIAA0895Q8NCT3 520 aa25.14■■□□□ 1.61
MCF2L-201ENST00000261963 OR8K1Q8NGG5 319 aa25.14■■□□□ 1.61
MCF2L-201ENST00000261963 HPS3Q969F9 1004 aa25.14■■□□□ 1.61
MCF2L-201ENST00000261963 PNMA5Q96PV4 448 aa25.14■■□□□ 1.61
MCF2L-201ENST00000261963 TUBGCP2Q9BSJ2 902 aa25.14■■□□□ 1.61
MCF2L-201ENST00000261963 JMJD4Q9H9V9 463 aa25.14■■□□□ 1.61
MCF2L-201ENST00000261963 SERPINB13Q9UIV8 391 aa25.14■■□□□ 1.61
MCF2L-201ENST00000261963 CAPN11Q9UMQ6 739 aa25.14■■□□□ 1.61
MCF2L-201ENST00000261963 PES1O00541 588 aaKnown RBP25.13■■□□□ 1.61
MCF2L-201ENST00000261963 PPP1R11O60927 126 aaPredicted RBP25.13■■□□□ 1.61
MCF2L-201ENST00000261963 TTLL1O95922 423 aa25.13■■□□□ 1.61
MCF2L-201ENST00000261963 CCDC47Q96A33 483 aaKnown RBP25.13■■□□□ 1.61
MCF2L-201ENST00000261963 CALML4Q96GE6 196 aa25.13■■□□□ 1.61
MCF2L-201ENST00000261963 USP40Q9NVE5 1235 aa25.13■■□□□ 1.61
MCF2L-201ENST00000261963 LRRIQ3A6PVS8 624 aaPredicted RBP25.13■■□□□ 1.61
MCF2L-201ENST00000261963 DNM2P50570 870 aa25.13■■□□□ 1.61
MCF2L-201ENST00000261963 AMPD3Q01432 767 aa25.13■■□□□ 1.61
MCF2L-201ENST00000261963 WHAMMP3Q1A5X7 153 aa25.13■■□□□ 1.61
MCF2L-201ENST00000261963 AFAP1L1Q8TED9 768 aa25.13■■□□□ 1.61
MCF2L-201ENST00000261963 LRWD1Q9UFC0 647 aa25.13■■□□□ 1.61
MCF2L-201ENST00000261963 LUC7L2Q9Y383 392 aaKnown RBP25.13■■□□□ 1.61
MCF2L-201ENST00000261963 A0A087WUV0 522 aaPredicted RBP25.12■■□□□ 1.61
MCF2L-201ENST00000261963 BICDL2A1A5D9 508 aa25.12■■□□□ 1.61
MCF2L-201ENST00000261963 RASSF10A6NK89 507 aa25.12■■□□□ 1.61
MCF2L-201ENST00000261963 CHRM1P11229 460 aaPredicted RBP25.12■■□□□ 1.61
MCF2L-201ENST00000261963 SCNN1DP51172 638 aa25.12■■□□□ 1.61
MCF2L-201ENST00000261963 WDR59Q6PJI9 974 aa25.12■■□□□ 1.61
MCF2L-201ENST00000261963 ADGRF4Q8IZF3 695 aa25.12■■□□□ 1.61
MCF2L-201ENST00000261963 PROM2Q8N271 834 aa25.12■■□□□ 1.61
MCF2L-201ENST00000261963 TTYH3Q9C0H2 523 aa25.12■■□□□ 1.61
MCF2L-201ENST00000261963 PLEKHA4Q9H4M7 779 aa25.12■■□□□ 1.61
MCF2L-201ENST00000261963 EPN1Q9Y6I3 576 aaPredicted RBP25.12■■□□□ 1.61
MCF2L-201ENST00000261963 NDUFA10O95299 355 aa25.12■■□□□ 1.61
MCF2L-201ENST00000261963 QSER1Q2KHR3 1735 aa25.12■■□□□ 1.61
MCF2L-201ENST00000261963 COBLL1Q53SF7 1204 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms