RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 C2CD5Q86YS7 1000 aa18.23■□□□□ 0.51
TM9SF1-201ENST00000261789 CCDC155Q8N6L0 562 aa18.23■□□□□ 0.51
TM9SF1-201ENST00000261789 MAGEF1Q9HAY2 307 aa18.23■□□□□ 0.51
TM9SF1-201ENST00000261789 CDK5RAP2Q96SN8 1893 aa18.23■□□□□ 0.51
TM9SF1-201ENST00000261789 EIF3CLB5ME19 914 aaKnown RBP18.23■□□□□ 0.51
TM9SF1-201ENST00000261789 TUBB4BP68371 445 aa18.23■□□□□ 0.51
TM9SF1-201ENST00000261789 AMPD3Q01432 767 aa18.23■□□□□ 0.51
TM9SF1-201ENST00000261789 WDR93Q6P2C0 686 aa18.23■□□□□ 0.51
TM9SF1-201ENST00000261789 FAM114A1Q8IWE2 563 aa18.23■□□□□ 0.51
TM9SF1-201ENST00000261789 ZSCAN29Q8IWY8 852 aaPredicted RBP18.23■□□□□ 0.51
TM9SF1-201ENST00000261789 EXOC4Q96A65 974 aa18.23■□□□□ 0.51
TM9SF1-201ENST00000261789 CCDC42Q96M95 316 aa18.23■□□□□ 0.51
TM9SF1-201ENST00000261789 MTMR9Q96QG7 549 aa18.23■□□□□ 0.51
TM9SF1-201ENST00000261789 EIF3CQ99613 913 aaKnown RBP18.23■□□□□ 0.51
TM9SF1-201ENST00000261789 GPCPD1Q9NPB8 672 aa18.23■□□□□ 0.51
TM9SF1-201ENST00000261789 THSD7AQ9UPZ6 1657 aa18.22■□□□□ 0.51
TM9SF1-201ENST00000261789 RGL2O15211 777 aa18.22■□□□□ 0.51
TM9SF1-201ENST00000261789 PDHBP11177 359 aa18.22■□□□□ 0.51
TM9SF1-201ENST00000261789 MRPS25P82663 173 aaKnown RBP18.22■□□□□ 0.51
TM9SF1-201ENST00000261789 CCDC96Q2M329 555 aa18.22■□□□□ 0.51
TM9SF1-201ENST00000261789 CENPPQ6IPU0 288 aa18.22■□□□□ 0.51
TM9SF1-201ENST00000261789 CAGE1Q8TC20 777 aa18.22■□□□□ 0.51
TM9SF1-201ENST00000261789 ERGIC2Q96RQ1 377 aa18.22■□□□□ 0.51
TM9SF1-201ENST00000261789 MMRN2Q9H8L6 949 aa18.22■□□□□ 0.51
TM9SF1-201ENST00000261789 MLXIPQ9HAP2 919 aa18.22■□□□□ 0.51
TM9SF1-201ENST00000261789 ARHGAP20Q9P2F6 1191 aa18.22■□□□□ 0.51
TM9SF1-201ENST00000261789 EIF3JO75822 258 aaKnown RBP18.22■□□□□ 0.51
TM9SF1-201ENST00000261789 MYBL2P10244 700 aa18.22■□□□□ 0.51
TM9SF1-201ENST00000261789 TNNT3P45378 269 aaPredicted RBP18.22■□□□□ 0.51
TM9SF1-201ENST00000261789 C2orf54Q08AI8 447 aa18.22■□□□□ 0.51
TM9SF1-201ENST00000261789 ZSCAN26Q16670 478 aa18.22■□□□□ 0.51
TM9SF1-201ENST00000261789 UBE2SQ16763 222 aa18.22■□□□□ 0.51
TM9SF1-201ENST00000261789 FKBP15Q5T1M5 1219 aa18.22■□□□□ 0.51
TM9SF1-201ENST00000261789 TRAPPC3LQ5T215 181 aa18.22■□□□□ 0.51
TM9SF1-201ENST00000261789 RETREG2Q8NC44 543 aa18.22■□□□□ 0.51
TM9SF1-201ENST00000261789 LARP4BQ92615 738 aaKnown RBP18.22■□□□□ 0.51
TM9SF1-201ENST00000261789 PSMB7Q99436 277 aa18.22■□□□□ 0.51
TM9SF1-201ENST00000261789 NDST4Q9H3R1 872 aa18.22■□□□□ 0.51
TM9SF1-201ENST00000261789 CAPN6Q9Y6Q1 641 aa18.22■□□□□ 0.51
TM9SF1-201ENST00000261789 SLURP2P0DP57 97 aa18.21■□□□□ 0.51
TM9SF1-201ENST00000261789 KIF5AQ12840 1032 aa18.21■□□□□ 0.51
TM9SF1-201ENST00000261789 ECM1Q16610 540 aa18.21■□□□□ 0.51
TM9SF1-201ENST00000261789 VWA3BQ502W6 1294 aa18.21■□□□□ 0.51
TM9SF1-201ENST00000261789 FAM196AQ6ZSG2 479 aa18.21■□□□□ 0.51
TM9SF1-201ENST00000261789 CCDC170Q8IYT3 715 aa18.21■□□□□ 0.51
TM9SF1-201ENST00000261789 RPGRQ92834 1020 aaKnown RBP18.21■□□□□ 0.51
TM9SF1-201ENST00000261789 CDK5RAP3Q96JB5 506 aa18.21■□□□□ 0.51
TM9SF1-201ENST00000261789 GBP3Q9H0R5 595 aa18.21■□□□□ 0.51
TM9SF1-201ENST00000261789 F8W031 263 aaPredicted RBP18.21■□□□□ 0.5
TM9SF1-201ENST00000261789 PRR5LQ6MZQ0 368 aa18.21■□□□□ 0.5
TM9SF1-201ENST00000261789 ZFP91Q96JP5 570 aaPredicted RBP18.21■□□□□ 0.5
TM9SF1-201ENST00000261789 USP21Q9UK80 565 aa18.21■□□□□ 0.5
TM9SF1-201ENST00000261789 MYH10P35580 1976 aa18.2■□□□□ 0.5
TM9SF1-201ENST00000261789 TNNI2P48788 182 aa18.2■□□□□ 0.5
TM9SF1-201ENST00000261789 VAV2P52735 878 aa18.2■□□□□ 0.5
TM9SF1-201ENST00000261789 ANKRD13CQ8N6S4 541 aa18.2■□□□□ 0.5
TM9SF1-201ENST00000261789 RIN2Q8WYP3 895 aaPredicted RBP18.2■□□□□ 0.5
TM9SF1-201ENST00000261789 SECISBP2LQ93073 1101 aaKnown RBP18.2■□□□□ 0.5
TM9SF1-201ENST00000261789 RIOX1Q9H6W3 641 aa18.2■□□□□ 0.5
TM9SF1-201ENST00000261789 SIK3Q9Y2K2 1263 aa18.2■□□□□ 0.5
TM9SF1-201ENST00000261789 ZNF831Q5JPB2 1677 aa18.2■□□□□ 0.5
TM9SF1-201ENST00000261789 MOCS3O95396 460 aa18.2■□□□□ 0.5
TM9SF1-201ENST00000261789 EIF4A3P38919 411 aaKnown RBP18.2■□□□□ 0.5
TM9SF1-201ENST00000261789 SPA17Q15506 151 aa18.2■□□□□ 0.5
TM9SF1-201ENST00000261789 SNX29Q8TEQ0 813 aa18.2■□□□□ 0.5
TM9SF1-201ENST00000261789 DDX12PQ92771 950 aa18.2■□□□□ 0.5
TM9SF1-201ENST00000261789 IFIH1Q9BYX4 1025 aaKnown RBP18.2■□□□□ 0.5
TM9SF1-201ENST00000261789 SMARCAL1Q9NZC9 954 aa18.2■□□□□ 0.5
TM9SF1-201ENST00000261789 POLLQ9UGP5 575 aa18.2■□□□□ 0.5
TM9SF1-201ENST00000261789 PLAGL2Q9UPG8 496 aa18.2■□□□□ 0.5
TM9SF1-201ENST00000261789 BTAF1O14981 1849 aa18.19■□□□□ 0.5
TM9SF1-201ENST00000261789 AKR1B1P15121 316 aa18.19■□□□□ 0.5
TM9SF1-201ENST00000261789 CXCR5P32302 372 aa18.19■□□□□ 0.5
TM9SF1-201ENST00000261789 NT5C2P49902 561 aa18.19■□□□□ 0.5
TM9SF1-201ENST00000261789 SEMA3FQ13275 785 aa18.19■□□□□ 0.5
TM9SF1-201ENST00000261789 TTBK2Q6IQ55 1244 aa18.19■□□□□ 0.5
TM9SF1-201ENST00000261789 ZNF662Q6ZS27 426 aa18.19■□□□□ 0.5
TM9SF1-201ENST00000261789 UNC13DQ70J99 1090 aa18.19■□□□□ 0.5
TM9SF1-201ENST00000261789 RRAGAQ7L523 313 aa18.19■□□□□ 0.5
TM9SF1-201ENST00000261789 EHBP1Q8NDI1 1231 aa18.19■□□□□ 0.5
TM9SF1-201ENST00000261789 COG1Q8WTW3 980 aa18.19■□□□□ 0.5
TM9SF1-201ENST00000261789 PURBQ96QR8 312 aaKnown RBP18.19■□□□□ 0.5
TM9SF1-201ENST00000261789 GGA1Q9UJY5 639 aa18.19■□□□□ 0.5
TM9SF1-201ENST00000261789 LRRC53A6NM62 1247 aa18.18■□□□□ 0.5
TM9SF1-201ENST00000261789 CAPN2P17655 700 aa18.18■□□□□ 0.5
TM9SF1-201ENST00000261789 SLC16A2P36021 539 aa18.18■□□□□ 0.5
TM9SF1-201ENST00000261789 ADCY7P51828 1080 aa18.18■□□□□ 0.5
TM9SF1-201ENST00000261789 RAD51AP2Q09MP3 1159 aa18.18■□□□□ 0.5
TM9SF1-201ENST00000261789 EZH2Q15910 746 aaKnown RBP18.18■□□□□ 0.5
TM9SF1-201ENST00000261789 HSP90B2PQ58FF3 399 aa18.18■□□□□ 0.5
TM9SF1-201ENST00000261789 MTMR4Q9NYA4 1195 aa18.18■□□□□ 0.5
TM9SF1-201ENST00000261789 TBC1D7Q9P0N9 293 aa18.18■□□□□ 0.5
TM9SF1-201ENST00000261789 PCDHA13Q9Y5I0 950 aa18.18■□□□□ 0.5
TM9SF1-201ENST00000261789 A0A1W2PQJ5 194 aa18.18■□□□□ 0.5
TM9SF1-201ENST00000261789 HSPA1LP34931 641 aa18.18■□□□□ 0.5
TM9SF1-201ENST00000261789 KIF11P52732 1056 aa18.18■□□□□ 0.5
TM9SF1-201ENST00000261789 DPP8Q6V1X1 898 aaPredicted RBP18.18■□□□□ 0.5
TM9SF1-201ENST00000261789 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.18■□□□□ 0.5
TM9SF1-201ENST00000261789 DEF6Q9H4E7 631 aa18.18■□□□□ 0.5
TM9SF1-201ENST00000261789 KANSL2Q9H9L4 492 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms