RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 PPP1R37O75864 691 aa17.78■□□□□ 0.44
SREBF1-201ENST00000261646 SUN1O94901 812 aa17.78■□□□□ 0.44
SREBF1-201ENST00000261646 TFRCP02786 760 aaKnown RBP17.78■□□□□ 0.44
SREBF1-201ENST00000261646 VPS41P49754 854 aa17.78■□□□□ 0.44
SREBF1-201ENST00000261646 SESN3P58005 492 aa17.78■□□□□ 0.44
SREBF1-201ENST00000261646 SLAIN2Q9P270 581 aa17.78■□□□□ 0.44
SREBF1-201ENST00000261646 SUFUQ9UMX1 484 aa17.78■□□□□ 0.44
SREBF1-201ENST00000261646 GMNCA6NCL1 334 aa17.78■□□□□ 0.44
SREBF1-201ENST00000261646 PGRMC1O00264 195 aaKnown RBP17.78■□□□□ 0.44
SREBF1-201ENST00000261646 PCCAP05165 728 aaPredicted RBP17.78■□□□□ 0.44
SREBF1-201ENST00000261646 GOLGA8HP0CJ92 632 aa17.78■□□□□ 0.44
SREBF1-201ENST00000261646 EIF6P56537 245 aaKnown RBP17.78■□□□□ 0.44
SREBF1-201ENST00000261646 SLC20A2Q08357 652 aa17.78■□□□□ 0.44
SREBF1-201ENST00000261646 TNIP1Q15025 636 aa17.78■□□□□ 0.44
SREBF1-201ENST00000261646 RBBP5Q15291 538 aaKnown RBP17.78■□□□□ 0.44
SREBF1-201ENST00000261646 ARMCX3Q9UH62 379 aaPredicted RBP17.78■□□□□ 0.44
SREBF1-201ENST00000261646 MRPL12P52815 198 aaKnown RBP17.78■□□□□ 0.44
SREBF1-201ENST00000261646 GRIN1Q05586 938 aa17.78■□□□□ 0.44
SREBF1-201ENST00000261646 MUM1Q2TAK8 710 aa17.78■□□□□ 0.44
SREBF1-201ENST00000261646 PACS2Q86VP3 889 aa17.78■□□□□ 0.44
SREBF1-201ENST00000261646 STRBPQ96SI9 672 aaKnown RBP17.78■□□□□ 0.44
SREBF1-201ENST00000261646 NEDD4P46934 1319 aa17.78■□□□□ 0.44
SREBF1-201ENST00000261646 MROH5Q6ZUA9 1318 aa17.78■□□□□ 0.44
SREBF1-201ENST00000261646 CEP170BQ9Y4F5 1589 aaPredicted RBP17.78■□□□□ 0.44
SREBF1-201ENST00000261646 MCAMP43121 646 aa17.77■□□□□ 0.44
SREBF1-201ENST00000261646 GSTO1P78417 241 aa17.77■□□□□ 0.44
SREBF1-201ENST00000261646 FAM26FQ5R3K3 315 aa17.77■□□□□ 0.44
SREBF1-201ENST00000261646 LCORLQ8N3X6 602 aa17.77■□□□□ 0.44
SREBF1-201ENST00000261646 ELAC2Q9BQ52 826 aaKnown RBP17.77■□□□□ 0.44
SREBF1-201ENST00000261646 ANKZF1Q9H8Y5 726 aa17.77■□□□□ 0.44
SREBF1-201ENST00000261646 NRKQ7Z2Y5 1582 aa17.77■□□□□ 0.44
SREBF1-201ENST00000261646 CYP2D7A0A087X1C5 515 aa17.77■□□□□ 0.44
SREBF1-201ENST00000261646 KRT15P19012 456 aa17.77■□□□□ 0.44
SREBF1-201ENST00000261646 MSANTD4Q8NCY6 345 aa17.77■□□□□ 0.44
SREBF1-201ENST00000261646 PLEKHA8P1O95397 391 aa17.77■□□□□ 0.43
SREBF1-201ENST00000261646 XRCC5P13010 732 aaKnown RBP17.77■□□□□ 0.43
SREBF1-201ENST00000261646 MYO1EQ12965 1108 aa17.77■□□□□ 0.43
SREBF1-201ENST00000261646 SLF2Q8IX21 1173 aa17.77■□□□□ 0.43
SREBF1-201ENST00000261646 VPS52Q8N1B4 723 aa17.77■□□□□ 0.43
SREBF1-201ENST00000261646 ZNF622Q969S3 477 aaKnown RBP eCLIP17.77■□□□□ 0.438e-7■■■□□ 15.4
SREBF1-201ENST00000261646 LY9Q9HBG7 655 aa17.77■□□□□ 0.43
SREBF1-201ENST00000261646 SEC24CP53992 1094 aa17.76■□□□□ 0.43
SREBF1-201ENST00000261646 ADCY1Q08828 1119 aa17.76■□□□□ 0.43
SREBF1-201ENST00000261646 FAM133AQ8N9E0 248 aa17.76■□□□□ 0.43
SREBF1-201ENST00000261646 FRMD4BQ9Y2L6 1034 aa17.76■□□□□ 0.43
SREBF1-201ENST00000261646 DAAM1Q9Y4D1 1078 aa17.76■□□□□ 0.43
SREBF1-201ENST00000261646 LDHBP07195 334 aaKnown RBP17.76■□□□□ 0.43
SREBF1-201ENST00000261646 ADAM9Q13443 819 aa17.76■□□□□ 0.43
SREBF1-201ENST00000261646 UAP1Q16222 522 aaPredicted RBP17.76■□□□□ 0.43
SREBF1-201ENST00000261646 CCT8L2Q96SF2 557 aa17.76■□□□□ 0.43
SREBF1-201ENST00000261646 SMIM24O75264 130 aa17.76■□□□□ 0.43
SREBF1-201ENST00000261646 PALMO75781 387 aa17.76■□□□□ 0.43
SREBF1-201ENST00000261646 GLE1Q53GS7 698 aaKnown RBP17.76■□□□□ 0.43
SREBF1-201ENST00000261646 NEK8Q86SG6 692 aa17.76■□□□□ 0.43
SREBF1-201ENST00000261646 RPGRQ92834 1020 aaKnown RBP17.76■□□□□ 0.43
SREBF1-201ENST00000261646 DISC1Q9NRI5 854 aa17.76■□□□□ 0.43
SREBF1-201ENST00000261646 ADAMTS13Q76LX8 1427 aa17.76■□□□□ 0.43
SREBF1-201ENST00000261646 LLGL1Q15334 1064 aa17.76■□□□□ 0.43
SREBF1-201ENST00000261646 FRMPD1Q5SYB0 1578 aa17.76■□□□□ 0.43
SREBF1-201ENST00000261646 HHATQ5VTY9 493 aa17.76■□□□□ 0.43
SREBF1-201ENST00000261646 SMARCAL1Q9NZC9 954 aa17.76■□□□□ 0.43
SREBF1-201ENST00000261646 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.76■□□□□ 0.43
SREBF1-201ENST00000261646 LRRD1A4D1F6 860 aa17.75■□□□□ 0.43
SREBF1-201ENST00000261646 MAGOHP61326 146 aaKnown RBP17.75■□□□□ 0.43
SREBF1-201ENST00000261646 MAGOHBQ96A72 148 aaKnown RBP17.75■□□□□ 0.43
SREBF1-201ENST00000261646 SNX12Q9UMY4 172 aa17.75■□□□□ 0.43
SREBF1-201ENST00000261646 MROH1Q8NDA8 1641 aa17.75■□□□□ 0.43
SREBF1-201ENST00000261646 FAM205CA6NFA0 338 aa17.75■□□□□ 0.43
SREBF1-201ENST00000261646 SPDYE3A6NKU9 549 aa17.75■□□□□ 0.43
SREBF1-201ENST00000261646 PRPF3O43395 683 aaKnown RBP17.75■□□□□ 0.43
SREBF1-201ENST00000261646 PLCG1P19174 1290 aa17.75■□□□□ 0.43
SREBF1-201ENST00000261646 PARP9Q8IXQ6 854 aa17.75■□□□□ 0.43
SREBF1-201ENST00000261646 ATP6V1G3Q96LB4 118 aa17.75■□□□□ 0.43
SREBF1-201ENST00000261646 FAM114A2Q9NRY5 505 aa17.75■□□□□ 0.43
SREBF1-201ENST00000261646 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.75■□□□□ 0.43
SREBF1-201ENST00000261646 RFX7Q2KHR2 1363 aa17.75■□□□□ 0.43
SREBF1-201ENST00000261646 GNA14O95837 355 aa17.75■□□□□ 0.43
SREBF1-201ENST00000261646 FYB2Q5VWT5 728 aa17.75■□□□□ 0.43
SREBF1-201ENST00000261646 HVCN1Q96D96 273 aa17.75■□□□□ 0.43
SREBF1-201ENST00000261646 GEMIN8Q9NWZ8 242 aaKnown RBP17.75■□□□□ 0.43
SREBF1-201ENST00000261646 PARP2Q9UGN5 583 aa17.75■□□□□ 0.43
SREBF1-201ENST00000261646 CDC42BPGQ6DT37 1551 aa17.75■□□□□ 0.43
SREBF1-201ENST00000261646 DDAH1O94760 285 aa17.74■□□□□ 0.43
SREBF1-201ENST00000261646 FKBP3Q00688 224 aaKnown RBP17.74■□□□□ 0.43
SREBF1-201ENST00000261646 PPP2R5EQ16537 467 aa17.74■□□□□ 0.43
SREBF1-201ENST00000261646 RDH13Q8NBN7 331 aa17.74■□□□□ 0.43
SREBF1-201ENST00000261646 ABCC12Q96J65 1359 aa17.74■□□□□ 0.43
SREBF1-201ENST00000261646 ELF1P32519 619 aa17.74■□□□□ 0.43
SREBF1-201ENST00000261646 GFPT1Q06210 699 aaPredicted RBP17.74■□□□□ 0.43
SREBF1-201ENST00000261646 PDIA6Q15084 440 aa17.74■□□□□ 0.43
SREBF1-201ENST00000261646 AGPAT5Q9NUQ2 364 aa17.74■□□□□ 0.43
SREBF1-201ENST00000261646 PACSIN2Q9UNF0 486 aaPredicted RBP17.74■□□□□ 0.43
SREBF1-201ENST00000261646 CALUO43852 315 aaPredicted RBP17.74■□□□□ 0.43
SREBF1-201ENST00000261646 PIGBQ92521 554 aa17.74■□□□□ 0.43
SREBF1-201ENST00000261646 FMO2Q99518 471 aa17.74■□□□□ 0.43
SREBF1-201ENST00000261646 ATG3Q9NT62 314 aa17.74■□□□□ 0.43
SREBF1-201ENST00000261646 HEG1Q9ULI3 1381 aa17.74■□□□□ 0.43
SREBF1-201ENST00000261646 STK36Q9NRP7 1315 aa17.73■□□□□ 0.43
SREBF1-201ENST00000261646 KLRF2D3W0D1 207 aa17.73■□□□□ 0.43
SREBF1-201ENST00000261646 KIF1CO43896 1103 aaKnown RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms