RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 M0R2N6 131 aa12.03□□□□□ -0.48
CHRNA1-201ENST00000261007 EIF3HO15372 352 aaKnown RBP eCLIP12.03□□□□□ -0.48
CHRNA1-201ENST00000261007 MYL1P05976 194 aa12.03□□□□□ -0.48
CHRNA1-201ENST00000261007 EPB41P11171 864 aaKnown RBP12.03□□□□□ -0.48
CHRNA1-201ENST00000261007 HNRNPH1P31943 449 aaKnown RBP12.03□□□□□ -0.48
CHRNA1-201ENST00000261007 PRPHP41219 470 aa12.03□□□□□ -0.48
CHRNA1-201ENST00000261007 STX17P56962 302 aa12.03□□□□□ -0.48
CHRNA1-201ENST00000261007 KRT83P78385 493 aa12.03□□□□□ -0.48
CHRNA1-201ENST00000261007 ITIH3Q06033 890 aa12.03□□□□□ -0.48
CHRNA1-201ENST00000261007 KLHL10Q6JEL2 608 aa12.03□□□□□ -0.48
CHRNA1-201ENST00000261007 HHIPL2Q6UWX4 724 aa12.03□□□□□ -0.48
CHRNA1-201ENST00000261007 DPP8Q6V1X1 898 aaPredicted RBP12.03□□□□□ -0.48
CHRNA1-201ENST00000261007 STAG2Q8N3U4 1231 aa12.03□□□□□ -0.48
CHRNA1-201ENST00000261007 MRIQ9BWK5 157 aa12.03□□□□□ -0.48
CHRNA1-201ENST00000261007 CAPS2Q9BXY5 557 aa12.03□□□□□ -0.48
CHRNA1-201ENST00000261007 C6orf50Q9HD87 102 aa12.03□□□□□ -0.48
CHRNA1-201ENST00000261007 A1CFQ9NQ94 594 aaKnown RBP12.03□□□□□ -0.48
CHRNA1-201ENST00000261007 RMND1Q9NWS8 449 aa12.03□□□□□ -0.48
CHRNA1-201ENST00000261007 FAM184BQ9ULE4 1060 aa12.03□□□□□ -0.48
CHRNA1-201ENST00000261007 GUCA1BQ9UMX6 200 aa12.03□□□□□ -0.48
CHRNA1-201ENST00000261007 REXO2Q9Y3B8 237 aaKnown RBP12.03□□□□□ -0.48
CHRNA1-201ENST00000261007 RGPD3A6NKT7 1758 aaPredicted RBP12.02□□□□□ -0.48
CHRNA1-201ENST00000261007 RGPD4Q7Z3J3 1758 aa12.02□□□□□ -0.48
CHRNA1-201ENST00000261007 MYH8P13535 1937 aa12.02□□□□□ -0.48
CHRNA1-201ENST00000261007 G3V3G9 751 aa12.02□□□□□ -0.49
CHRNA1-201ENST00000261007 STXBP3O00186 592 aa12.02□□□□□ -0.49
CHRNA1-201ENST00000261007 OPA1O60313 960 aa12.02□□□□□ -0.49
CHRNA1-201ENST00000261007 CCT5P48643 541 aa12.02□□□□□ -0.49
CHRNA1-201ENST00000261007 SKOR1P84550 965 aa12.02□□□□□ -0.49
CHRNA1-201ENST00000261007 ASPRV1Q53RT3 343 aa12.02□□□□□ -0.49
CHRNA1-201ENST00000261007 DCAF8Q5TAQ9 597 aa12.02□□□□□ -0.49
CHRNA1-201ENST00000261007 SOGA3Q5TF21 947 aa12.02□□□□□ -0.49
CHRNA1-201ENST00000261007 B4GALNT4Q76KP1 1039 aa12.02□□□□□ -0.49
CHRNA1-201ENST00000261007 CNPY4Q8N129 248 aa12.02□□□□□ -0.49
CHRNA1-201ENST00000261007 SLC44A5Q8NCS7 719 aa12.02□□□□□ -0.49
CHRNA1-201ENST00000261007 OR8K1Q8NGG5 319 aa12.02□□□□□ -0.49
CHRNA1-201ENST00000261007 AENQ8WTP8 325 aaKnown RBP12.02□□□□□ -0.49
CHRNA1-201ENST00000261007 SH3GL2Q99962 352 aa12.02□□□□□ -0.49
CHRNA1-201ENST00000261007 ZMYND12Q9H0C1 365 aa12.02□□□□□ -0.49
CHRNA1-201ENST00000261007 A0A1W2PQC6 194 aa12.01□□□□□ -0.49
CHRNA1-201ENST00000261007 HLA-DOAP06340 250 aa12.01□□□□□ -0.49
CHRNA1-201ENST00000261007 INPP5BP32019 993 aa12.01□□□□□ -0.49
CHRNA1-201ENST00000261007 MCM7P33993 719 aa12.01□□□□□ -0.49
CHRNA1-201ENST00000261007 GABPAQ06546 454 aa12.01□□□□□ -0.49
CHRNA1-201ENST00000261007 SLC4A8Q2Y0W8 1093 aa12.01□□□□□ -0.49
CHRNA1-201ENST00000261007 TCP11X2Q5H9J9 407 aa12.01□□□□□ -0.49
CHRNA1-201ENST00000261007 ZNF572Q7Z3I7 529 aaPredicted RBP12.01□□□□□ -0.49
CHRNA1-201ENST00000261007 HEATR3Q7Z4Q2 680 aa12.01□□□□□ -0.49
CHRNA1-201ENST00000261007 PODNQ7Z5L7 613 aa12.01□□□□□ -0.49
CHRNA1-201ENST00000261007 COL23A1Q86Y22 540 aaPredicted RBP12.01□□□□□ -0.49
CHRNA1-201ENST00000261007 MMGT1Q8N4V1 131 aa12.01□□□□□ -0.49
CHRNA1-201ENST00000261007 KAT2BQ92831 832 aa12.01□□□□□ -0.49
CHRNA1-201ENST00000261007 EPSTI1Q96J88 318 aa12.01□□□□□ -0.49
CHRNA1-201ENST00000261007 DNAJC7Q99615 494 aa12.01□□□□□ -0.49
CHRNA1-201ENST00000261007 MAGEF1Q9HAY2 307 aa12.01□□□□□ -0.49
CHRNA1-201ENST00000261007 RNF225M0QZC1 329 aaPredicted RBP12.01□□□□□ -0.49
CHRNA1-201ENST00000261007 KRT86O43790 486 aa12.01□□□□□ -0.49
CHRNA1-201ENST00000261007 GTPBP6O43824 516 aaPredicted RBP12.01□□□□□ -0.49
CHRNA1-201ENST00000261007 CLSTN1O94985 981 aa12.01□□□□□ -0.49
CHRNA1-201ENST00000261007 ATP1A1P05023 1023 aaKnown RBP12.01□□□□□ -0.49
CHRNA1-201ENST00000261007 HDLBPQ00341 1268 aaKnown RBP12.01□□□□□ -0.49
CHRNA1-201ENST00000261007 TSR1Q2NL82 804 aaKnown RBP12.01□□□□□ -0.49
CHRNA1-201ENST00000261007 ALS2CLQ60I27 953 aa12.01□□□□□ -0.49
CHRNA1-201ENST00000261007 DTHD1Q6ZMT9 781 aa12.01□□□□□ -0.49
CHRNA1-201ENST00000261007 USP49Q70CQ1 688 aa12.01□□□□□ -0.49
CHRNA1-201ENST00000261007 BCAS4Q8TDM0 211 aa12.01□□□□□ -0.49
CHRNA1-201ENST00000261007 GPKOWQ92917 476 aaPredicted RBP eCLIP12.01□□□□□ -0.49
CHRNA1-201ENST00000261007 TEKT1Q969V4 418 aa12.01□□□□□ -0.49
CHRNA1-201ENST00000261007 AK8Q96MA6 479 aa12.01□□□□□ -0.49
CHRNA1-201ENST00000261007 CUEDC2Q9H467 287 aa12.01□□□□□ -0.49
CHRNA1-201ENST00000261007 PCDHA6Q9UN73 950 aa12.01□□□□□ -0.49
CHRNA1-201ENST00000261007 PCDHA8Q9Y5H6 950 aa12.01□□□□□ -0.49
CHRNA1-201ENST00000261007 GRIN2DO15399 1336 aa12□□□□□ -0.49
CHRNA1-201ENST00000261007 CYTH3O43739 400 aa12□□□□□ -0.49
CHRNA1-201ENST00000261007 CCT6AP40227 531 aaKnown RBP12□□□□□ -0.49
CHRNA1-201ENST00000261007 AFMP43652 599 aa12□□□□□ -0.49
CHRNA1-201ENST00000261007 LIG3P49916 1009 aa12□□□□□ -0.49
CHRNA1-201ENST00000261007 NAPAP54920 295 aa12□□□□□ -0.49
CHRNA1-201ENST00000261007 SETQ01105 290 aaPredicted RBP12□□□□□ -0.49
CHRNA1-201ENST00000261007 NONOQ15233 471 aaKnown RBP eCLIP12□□□□□ -0.49
CHRNA1-201ENST00000261007 E2F4Q16254 413 aa12□□□□□ -0.49
CHRNA1-201ENST00000261007 CCDC122Q5T0U0 273 aa12□□□□□ -0.49
CHRNA1-201ENST00000261007 STYK1Q6J9G0 422 aa12□□□□□ -0.49
CHRNA1-201ENST00000261007 PPP1R18Q6NYC8 613 aa12□□□□□ -0.49
CHRNA1-201ENST00000261007 SLC51AQ86UW1 340 aa12□□□□□ -0.49
CHRNA1-201ENST00000261007 PRPF38AQ8NAV1 312 aaKnown RBP12□□□□□ -0.49
CHRNA1-201ENST00000261007 RIN2Q8WYP3 895 aaPredicted RBP12□□□□□ -0.49
CHRNA1-201ENST00000261007 JAKMIP2Q96AA8 810 aa12□□□□□ -0.49
CHRNA1-201ENST00000261007 CEP95Q96GE4 821 aa12□□□□□ -0.49
CHRNA1-201ENST00000261007 CCDC17Q96LX7 622 aa12□□□□□ -0.49
CHRNA1-201ENST00000261007 CHP1Q99653 195 aa12□□□□□ -0.49
CHRNA1-201ENST00000261007 PAGR1Q9BTK6 254 aa12□□□□□ -0.49
CHRNA1-201ENST00000261007 EHD4Q9H223 541 aa12□□□□□ -0.49
CHRNA1-201ENST00000261007 CXorf56Q9H5V9 222 aa12□□□□□ -0.49
CHRNA1-201ENST00000261007 SERPINB13Q9UIV8 391 aa12□□□□□ -0.49
CHRNA1-201ENST00000261007 CTNND2Q9UQB3 1225 aa12□□□□□ -0.49
CHRNA1-201ENST00000261007 A0A087X0B3 334 aa11.99□□□□□ -0.49
CHRNA1-201ENST00000261007 KCNJ18B7U540 433 aa11.99□□□□□ -0.49
CHRNA1-201ENST00000261007 RIMBP2O15034 1052 aa11.99□□□□□ -0.49
CHRNA1-201ENST00000261007 APBA3O96018 575 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms