RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 NR1I3Q14994 352 aa19.92■□□□□ 0.78
SSB-201ENST00000260956 NEK8Q86SG6 692 aa19.92■□□□□ 0.78
SSB-201ENST00000260956 SMYD4Q8IYR2 804 aaPredicted RBP19.92■□□□□ 0.78
SSB-201ENST00000260956 REXO1Q8N1G1 1221 aaKnown RBP19.92■□□□□ 0.78
SSB-201ENST00000260956 HOOK2Q96ED9 719 aa19.92■□□□□ 0.78
SSB-201ENST00000260956 SLC10A4Q96EP9 437 aa19.92■□□□□ 0.78
SSB-201ENST00000260956 CCDC17Q96LX7 622 aa19.92■□□□□ 0.78
SSB-201ENST00000260956 BLZF1Q9H2G9 400 aa19.92■□□□□ 0.78
SSB-201ENST00000260956 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.92■□□□□ 0.78
SSB-201ENST00000260956 KBTBD4Q9NVX7 518 aa19.92■□□□□ 0.78
SSB-201ENST00000260956 KLRC4O43908 158 aa19.91■□□□□ 0.78
SSB-201ENST00000260956 HLA-DOAP06340 250 aa19.91■□□□□ 0.78
SSB-201ENST00000260956 CLK2P49760 499 aaKnown RBP19.91■□□□□ 0.78
SSB-201ENST00000260956 TATDN1Q6P1N9 297 aa19.91■□□□□ 0.78
SSB-201ENST00000260956 MKL1Q969V6 931 aa19.91■□□□□ 0.78
SSB-201ENST00000260956 AK8Q96MA6 479 aa19.91■□□□□ 0.78
SSB-201ENST00000260956 TMEM260Q9NX78 707 aa19.91■□□□□ 0.78
SSB-201ENST00000260956 MYH7BA7E2Y1 1941 aa19.91■□□□□ 0.78
SSB-201ENST00000260956 SPRYD7Q5W111 196 aa19.9■□□□□ 0.78
SSB-201ENST00000260956 CCDC84Q86UT8 332 aaPredicted RBP19.9■□□□□ 0.78
SSB-201ENST00000260956 CCDC102AQ96A19 550 aa19.9■□□□□ 0.78
SSB-201ENST00000260956 MTMR9Q96QG7 549 aa19.9■□□□□ 0.78
SSB-201ENST00000260956 MMTAG2Q9BU76 263 aaKnown RBP19.9■□□□□ 0.78
SSB-201ENST00000260956 RIOK3O14730 519 aaKnown RBP19.9■□□□□ 0.78
SSB-201ENST00000260956 RPN1P04843 607 aaKnown RBP19.9■□□□□ 0.78
SSB-201ENST00000260956 TNNT1P13805 278 aa19.9■□□□□ 0.78
SSB-201ENST00000260956 TTBK2Q6IQ55 1244 aa19.9■□□□□ 0.78
SSB-201ENST00000260956 SIAH1Q8IUQ4 282 aa19.9■□□□□ 0.78
SSB-201ENST00000260956 IGSF22Q8N9C0 903 aa19.9■□□□□ 0.78
SSB-201ENST00000260956 TBCKQ8TEA7 893 aa19.9■□□□□ 0.78
SSB-201ENST00000260956 PNMA6FA0A0J9YX94 578 aa19.89■□□□□ 0.77
SSB-201ENST00000260956 UNCXA6NJT0 531 aa19.89■□□□□ 0.77
SSB-201ENST00000260956 CTIFO43310 598 aaKnown RBP19.89■□□□□ 0.77
SSB-201ENST00000260956 TXLNAP40222 546 aa19.89■□□□□ 0.77
SSB-201ENST00000260956 STAT6P42226 847 aa19.89■□□□□ 0.77
SSB-201ENST00000260956 ECE1P42892 770 aa19.89■□□□□ 0.77
SSB-201ENST00000260956 SEMA3FQ13275 785 aa19.89■□□□□ 0.77
SSB-201ENST00000260956 KCNB1Q14721 858 aa19.89■□□□□ 0.77
SSB-201ENST00000260956 PTPN21Q16825 1174 aa19.89■□□□□ 0.77
SSB-201ENST00000260956 GPATCH4Q5T3I0 446 aaKnown RBP19.89■□□□□ 0.77
SSB-201ENST00000260956 ZNF658Q5TYW1 1059 aaPredicted RBP19.89■□□□□ 0.77
SSB-201ENST00000260956 ADGRF4Q8IZF3 695 aa19.89■□□□□ 0.77
SSB-201ENST00000260956 COA7Q96BR5 231 aa19.89■□□□□ 0.77
SSB-201ENST00000260956 OPTNQ96CV9 577 aa19.89■□□□□ 0.77
SSB-201ENST00000260956 WNK4Q96J92 1243 aa19.89■□□□□ 0.77
SSB-201ENST00000260956 VAT1LQ9HCJ6 419 aa19.89■□□□□ 0.77
SSB-201ENST00000260956 RIC8AQ9NPQ8 531 aa19.89■□□□□ 0.77
SSB-201ENST00000260956 ADD3Q9UEY8 706 aaKnown RBP19.89■□□□□ 0.77
SSB-201ENST00000260956 HERC5Q9UII4 1024 aaKnown RBP19.89■□□□□ 0.77
SSB-201ENST00000260956 MYL1P05976 194 aa19.88■□□□□ 0.77
SSB-201ENST00000260956 ADCY7P51828 1080 aa19.88■□□□□ 0.77
SSB-201ENST00000260956 TPD52L1Q16890 204 aaPredicted RBP19.88■□□□□ 0.77
SSB-201ENST00000260956 HSP90AA4PQ58FG1 418 aa19.88■□□□□ 0.77
SSB-201ENST00000260956 CCDC112Q8NEF3 446 aa19.88■□□□□ 0.77
SSB-201ENST00000260956 MAGEF1Q9HAY2 307 aa19.88■□□□□ 0.77
SSB-201ENST00000260956 GPCPD1Q9NPB8 672 aa19.88■□□□□ 0.77
SSB-201ENST00000260956 NYAP2Q9P242 653 aa19.88■□□□□ 0.77
SSB-201ENST00000260956 RWDD2AQ9UIY3 292 aa19.88■□□□□ 0.77
SSB-201ENST00000260956 CSADQ9Y600 493 aa19.88■□□□□ 0.77
SSB-201ENST00000260956 NOGQ13253 232 aa19.88■□□□□ 0.77
SSB-201ENST00000260956 LETM2Q2VYF4 491 aa19.88■□□□□ 0.77
SSB-201ENST00000260956 PPP4R3BQ5MIZ7 849 aa19.88■□□□□ 0.77
SSB-201ENST00000260956 NOL9Q5SY16 702 aaKnown RBP19.88■□□□□ 0.77
SSB-201ENST00000260956 TC2NQ8N9U0 490 aa19.88■□□□□ 0.77
SSB-201ENST00000260956 OTUD5Q96G74 571 aa19.88■□□□□ 0.77
SSB-201ENST00000260956 PPP1R13BQ96KQ4 1090 aa19.88■□□□□ 0.77
SSB-201ENST00000260956 CUEDC2Q9H467 287 aa19.88■□□□□ 0.77
SSB-201ENST00000260956 BIN2Q9UBW5 565 aaPredicted RBP19.88■□□□□ 0.77
SSB-201ENST00000260956 CTNND2Q9UQB3 1225 aa19.88■□□□□ 0.77
SSB-201ENST00000260956 SPDYE5A6NIY4 337 aa19.87■□□□□ 0.77
SSB-201ENST00000260956 CTNND1O60716 968 aaKnown RBP19.87■□□□□ 0.77
SSB-201ENST00000260956 CAP2P40123 477 aa19.87■□□□□ 0.77
SSB-201ENST00000260956 STX17P56962 302 aa19.87■□□□□ 0.77
SSB-201ENST00000260956 JAKMIP3Q5VZ66 844 aa19.87■□□□□ 0.77
SSB-201ENST00000260956 SPECC1LQ69YQ0 1117 aa19.87■□□□□ 0.77
SSB-201ENST00000260956 POTEDQ86YR6 584 aa19.87■□□□□ 0.77
SSB-201ENST00000260956 SCYL3Q8IZE3 742 aa19.87■□□□□ 0.77
SSB-201ENST00000260956 RMND1Q9NWS8 449 aa19.87■□□□□ 0.77
SSB-201ENST00000260956 LRRC10BA6NIK2 292 aa19.86■□□□□ 0.77
SSB-201ENST00000260956 IRF6O14896 467 aa19.86■□□□□ 0.77
SSB-201ENST00000260956 CCNT1O60563 726 aaKnown RBP19.86■□□□□ 0.77
SSB-201ENST00000260956 GDF11O95390 407 aa19.86■□□□□ 0.77
SSB-201ENST00000260956 PTPRAP18433 802 aa19.86■□□□□ 0.77
SSB-201ENST00000260956 PLCG1P19174 1290 aa19.86■□□□□ 0.77
SSB-201ENST00000260956 MAP2K2P36507 400 aa19.86■□□□□ 0.77
SSB-201ENST00000260956 FXR2P51116 673 aaKnown RBP eCLIP19.86■□□□□ 0.776e-15■■■■□ 20
SSB-201ENST00000260956 GOLGA8FQ08AF8 430 aa19.86■□□□□ 0.77
SSB-201ENST00000260956 GOLGA8DPQ0D2H9 430 aa19.86■□□□□ 0.77
SSB-201ENST00000260956 RRAGBQ5VZM2 374 aa19.86■□□□□ 0.77
SSB-201ENST00000260956 KLHL10Q6JEL2 608 aa19.86■□□□□ 0.77
SSB-201ENST00000260956 ADSSL1Q8N142 457 aa19.86■□□□□ 0.77
SSB-201ENST00000260956 ZNF710Q8N1W2 664 aa19.86■□□□□ 0.77
SSB-201ENST00000260956 MS4A4AQ96JQ5 239 aa19.86■□□□□ 0.77
SSB-201ENST00000260956 LIMA1Q9UHB6 759 aaKnown RBP19.86■□□□□ 0.77
SSB-201ENST00000260956 GDAQ9Y2T3 454 aa19.86■□□□□ 0.77
SSB-201ENST00000260956 SLC37A4O43826 429 aa19.85■□□□□ 0.77
SSB-201ENST00000260956 RHOBTB3O94955 611 aa19.85■□□□□ 0.77
SSB-201ENST00000260956 UBA7P41226 1012 aa19.85■□□□□ 0.77
SSB-201ENST00000260956 CABP7Q86V35 215 aa19.85■□□□□ 0.77
SSB-201ENST00000260956 FCHSD1Q86WN1 690 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms