RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 ABCB11O95342 1321 aa25.21■■□□□ 1.63
SIX3-201ENST00000260653 USP2O75604 605 aaPredicted RBP25.21■■□□□ 1.63
SIX3-201ENST00000260653 DPY19L2Q6NUT2 758 aa25.21■■□□□ 1.63
SIX3-201ENST00000260653 MBOAT7Q96N66 472 aa25.21■■□□□ 1.63
SIX3-201ENST00000260653 RTN4Q9NQC3 1192 aaKnown RBP25.21■■□□□ 1.63
SIX3-201ENST00000260653 GCOM1H8Y6P7 765 aaPredicted RBP25.21■■□□□ 1.63
SIX3-201ENST00000260653 POLR2MP0CAP2 368 aa25.21■■□□□ 1.63
SIX3-201ENST00000260653 HMGCS2P54868 508 aa25.21■■□□□ 1.63
SIX3-201ENST00000260653 GPR162Q16538 588 aa25.21■■□□□ 1.63
SIX3-201ENST00000260653 MOXD1Q6UVY6 613 aa25.21■■□□□ 1.63
SIX3-201ENST00000260653 PPP1R9AQ9ULJ8 1098 aa25.21■■□□□ 1.63
SIX3-201ENST00000260653 GTPBP6O43824 516 aaPredicted RBP25.2■■□□□ 1.62
SIX3-201ENST00000260653 NOL9Q5SY16 702 aaKnown RBP25.2■■□□□ 1.62
SIX3-201ENST00000260653 GSDMAQ96QA5 445 aa25.2■■□□□ 1.62
SIX3-201ENST00000260653 KCNMB3Q9NPA1 279 aa25.2■■□□□ 1.62
SIX3-201ENST00000260653 MARCH6O60337 910 aa25.2■■□□□ 1.62
SIX3-201ENST00000260653 PRR16Q569H4 304 aa25.2■■□□□ 1.62
SIX3-201ENST00000260653 L3MBTL3Q96JM7 780 aaPredicted RBP25.2■■□□□ 1.62
SIX3-201ENST00000260653 RAB34Q9BZG1 259 aa25.2■■□□□ 1.62
SIX3-201ENST00000260653 SLC38A10Q9HBR0 1119 aa25.2■■□□□ 1.62
SIX3-201ENST00000260653 PARP14Q460N5 1801 aa25.2■■□□□ 1.62
SIX3-201ENST00000260653 FAM86B1E9PN63 330 aa25.19■■□□□ 1.62
SIX3-201ENST00000260653 FAM86B2P0C5J1 330 aa25.19■■□□□ 1.62
SIX3-201ENST00000260653 PDIA5Q14554 519 aa25.19■■□□□ 1.62
SIX3-201ENST00000260653 PLA2G4DQ86XP0 818 aa25.19■■□□□ 1.62
SIX3-201ENST00000260653 CPXCR1Q8N123 301 aa25.19■■□□□ 1.62
SIX3-201ENST00000260653 IKBKBO14920 756 aa25.19■■□□□ 1.62
SIX3-201ENST00000260653 PTMAP06454 111 aaKnown RBP25.19■■□□□ 1.62
SIX3-201ENST00000260653 ZNF75DP51815 510 aa25.19■■□□□ 1.62
SIX3-201ENST00000260653 KRT26Q7Z3Y9 468 aa25.19■■□□□ 1.62
SIX3-201ENST00000260653 MLKLQ8NB16 471 aa25.19■■□□□ 1.62
SIX3-201ENST00000260653 RAVER2Q9HCJ3 691 aaKnown RBP25.19■■□□□ 1.62
SIX3-201ENST00000260653 PCDHA12Q9UN75 941 aa25.19■■□□□ 1.62
SIX3-201ENST00000260653 SARM1Q6SZW1 724 aa25.18■■□□□ 1.62
SIX3-201ENST00000260653 LENG9Q96B70 501 aa25.18■■□□□ 1.62
SIX3-201ENST00000260653 VGLL4Q14135 290 aa25.18■■□□□ 1.62
SIX3-201ENST00000260653 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.18■■□□□ 1.62
SIX3-201ENST00000260653 TEX2Q8IWB9 1127 aa25.18■■□□□ 1.62
SIX3-201ENST00000260653 CALML4Q96GE6 196 aa25.18■■□□□ 1.62
SIX3-201ENST00000260653 KBTBD4Q9NVX7 518 aa25.18■■□□□ 1.62
SIX3-201ENST00000260653 SMTNL1A8MU46 457 aa25.17■■□□□ 1.62
SIX3-201ENST00000260653 MYL5Q02045 173 aa25.17■■□□□ 1.62
SIX3-201ENST00000260653 NUDT12Q9BQG2 462 aa25.17■■□□□ 1.62
SIX3-201ENST00000260653 GRB10Q13322 594 aa25.17■■□□□ 1.62
SIX3-201ENST00000260653 ETNPPLQ8TBG4 499 aa25.17■■□□□ 1.62
SIX3-201ENST00000260653 SNX29Q8TEQ0 813 aa25.17■■□□□ 1.62
SIX3-201ENST00000260653 WNK4Q96J92 1243 aa25.17■■□□□ 1.62
SIX3-201ENST00000260653 HSD3B7Q9H2F3 369 aa25.17■■□□□ 1.62
SIX3-201ENST00000260653 SNCAIPQ9Y6H5 919 aa25.17■■□□□ 1.62
SIX3-201ENST00000260653 OTOFQ9HC10 1997 aa25.17■■□□□ 1.62
SIX3-201ENST00000260653 NFIBO00712 420 aa25.16■■□□□ 1.62
SIX3-201ENST00000260653 CIITAP33076 1130 aa25.16■■□□□ 1.62
SIX3-201ENST00000260653 EPHX2P34913 555 aa25.16■■□□□ 1.62
SIX3-201ENST00000260653 FMR1Q06787 632 aaKnown RBP eCLIP25.16■■□□□ 1.62
SIX3-201ENST00000260653 Q4G0T1 1027 aa25.16■■□□□ 1.62
SIX3-201ENST00000260653 SMYD4Q8IYR2 804 aaPredicted RBP25.16■■□□□ 1.62
SIX3-201ENST00000260653 SPC24Q8NBT2 197 aa25.16■■□□□ 1.62
SIX3-201ENST00000260653 CYP2W1Q8TAV3 490 aa25.16■■□□□ 1.62
SIX3-201ENST00000260653 C12orf42Q96LP6 360 aa25.16■■□□□ 1.62
SIX3-201ENST00000260653 CUEDC2Q9H467 287 aa25.16■■□□□ 1.62
SIX3-201ENST00000260653 AFG3L2Q9Y4W6 797 aa25.16■■□□□ 1.62
SIX3-201ENST00000260653 CYP3A4P08684 503 aa25.16■■□□□ 1.62
SIX3-201ENST00000260653 ALAS1P13196 640 aa25.16■■□□□ 1.62
SIX3-201ENST00000260653 HS1BP3Q53T59 392 aa25.16■■□□□ 1.62
SIX3-201ENST00000260653 ATG4CQ96DT6 458 aa25.16■■□□□ 1.62
SIX3-201ENST00000260653 PNMA5Q96PV4 448 aa25.16■■□□□ 1.62
SIX3-201ENST00000260653 HOMER2Q9NSB8 354 aa25.16■■□□□ 1.62
SIX3-201ENST00000260653 DACH1Q9UI36 760 aa25.16■■□□□ 1.62
SIX3-201ENST00000260653 RLFQ13129 1914 aa25.15■■□□□ 1.62
SIX3-201ENST00000260653 C19orf81C9J6K1 198 aa25.15■■□□□ 1.62
SIX3-201ENST00000260653 UBXN2AP68543 259 aa25.15■■□□□ 1.62
SIX3-201ENST00000260653 KRT79Q5XKE5 535 aa25.15■■□□□ 1.62
SIX3-201ENST00000260653 CLEC4DQ8WXI8 215 aa25.15■■□□□ 1.62
SIX3-201ENST00000260653 PAPPA2Q9BXP8 1791 aa25.15■■□□□ 1.62
SIX3-201ENST00000260653 RPN1P04843 607 aaKnown RBP25.15■■□□□ 1.62
SIX3-201ENST00000260653 USP50Q70EL3 339 aaPredicted RBP25.15■■□□□ 1.62
SIX3-201ENST00000260653 CD44P16070 742 aaKnown RBP25.14■■□□□ 1.62
SIX3-201ENST00000260653 MAP3K9P80192 1104 aa25.14■■□□□ 1.62
SIX3-201ENST00000260653 SLFN12Q8IYM2 578 aa25.14■■□□□ 1.62
SIX3-201ENST00000260653 MAGEF1Q9HAY2 307 aa25.14■■□□□ 1.62
SIX3-201ENST00000260653 VWA5AO00534 786 aa25.14■■□□□ 1.61
SIX3-201ENST00000260653 ZNF76P36508 570 aa25.14■■□□□ 1.61
SIX3-201ENST00000260653 HSD17B4P51659 736 aa25.14■■□□□ 1.61
SIX3-201ENST00000260653 MUM1L1Q5H9M0 696 aa25.14■■□□□ 1.61
SIX3-201ENST00000260653 TRMT44Q8IYL2 757 aaKnown RBP25.14■■□□□ 1.61
SIX3-201ENST00000260653 CDK5RAP3Q96JB5 506 aa25.14■■□□□ 1.61
SIX3-201ENST00000260653 TPM4P67936 248 aa25.13■■□□□ 1.61
SIX3-201ENST00000260653 MED15Q96RN5 788 aa25.13■■□□□ 1.61
SIX3-201ENST00000260653 BLOC1S4Q9NUP1 217 aa25.13■■□□□ 1.61
SIX3-201ENST00000260653 CTDP1Q9Y5B0 961 aaPredicted RBP25.13■■□□□ 1.61
SIX3-201ENST00000260653 WDR90Q96KV7 1748 aa25.13■■□□□ 1.61
SIX3-201ENST00000260653 IGLV3-22A0A075B6J6 115 aa25.13■■□□□ 1.61
SIX3-201ENST00000260653 GLTPD2A6NH11 291 aa25.13■■□□□ 1.61
SIX3-201ENST00000260653 PPP1R12BO60237 982 aaPredicted RBP25.13■■□□□ 1.61
SIX3-201ENST00000260653 ZBED4O75132 1171 aa25.13■■□□□ 1.61
SIX3-201ENST00000260653 STAT3P40763 770 aa25.13■■□□□ 1.61
SIX3-201ENST00000260653 CNKSR2Q8WXI2 1034 aa25.13■■□□□ 1.61
SIX3-201ENST00000260653 COL11A1P12107 1806 aaPredicted RBP25.12■■□□□ 1.61
SIX3-201ENST00000260653 TBX3O15119 743 aa25.12■■□□□ 1.61
SIX3-201ENST00000260653 MSH4O15457 936 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms