RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 SARM1Q6SZW1 724 aa10.63□□□□□ -0.71
CTDSPL2-201ENST00000260327 H2AFVQ71UI9 128 aa10.63□□□□□ -0.71
CTDSPL2-201ENST00000260327 FOXP1Q9H334 677 aaPredicted RBP10.63□□□□□ -0.71
CTDSPL2-201ENST00000260327 BACH1O14867 736 aa10.63□□□□□ -0.71
CTDSPL2-201ENST00000260327 CYP2J2P51589 502 aa10.63□□□□□ -0.71
CTDSPL2-201ENST00000260327 CYP4F22Q6NT55 531 aa10.63□□□□□ -0.71
CTDSPL2-201ENST00000260327 ARMC9Q7Z3E5 817 aa10.63□□□□□ -0.71
CTDSPL2-201ENST00000260327 CNPY4Q8N129 248 aa10.63□□□□□ -0.71
CTDSPL2-201ENST00000260327 RSAD2Q8WXG1 361 aa10.63□□□□□ -0.71
CTDSPL2-201ENST00000260327 NHEJ1Q9H9Q4 299 aaPredicted RBP10.63□□□□□ -0.71
CTDSPL2-201ENST00000260327 RTCBQ9Y3I0 505 aaKnown RBP10.63□□□□□ -0.71
CTDSPL2-201ENST00000260327 DAAM1Q9Y4D1 1078 aa10.63□□□□□ -0.71
CTDSPL2-201ENST00000260327 AATKQ6ZMQ8 1374 aa10.63□□□□□ -0.71
CTDSPL2-201ENST00000260327 ZYXQ15942 572 aaKnown RBP10.63□□□□□ -0.71
CTDSPL2-201ENST00000260327 NUGGCQ68CJ6 796 aa10.63□□□□□ -0.71
CTDSPL2-201ENST00000260327 PNMA1Q8ND90 353 aa10.63□□□□□ -0.71
CTDSPL2-201ENST00000260327 RIC8AQ9NPQ8 531 aa10.63□□□□□ -0.71
CTDSPL2-201ENST00000260327 THEGQ9P2T0 379 aa10.63□□□□□ -0.71
CTDSPL2-201ENST00000260327 HMGB1P1B2RPK0 211 aaPredicted RBP10.62□□□□□ -0.71
CTDSPL2-201ENST00000260327 SH3BP5O60239 455 aa10.62□□□□□ -0.71
CTDSPL2-201ENST00000260327 APOEP02649 317 aa10.62□□□□□ -0.71
CTDSPL2-201ENST00000260327 OR52Z1P0C646 297 aa10.62□□□□□ -0.71
CTDSPL2-201ENST00000260327 PHBP35232 272 aa10.62□□□□□ -0.71
CTDSPL2-201ENST00000260327 TTLL12Q14166 644 aaPredicted RBP10.62□□□□□ -0.71
CTDSPL2-201ENST00000260327 PARP10Q53GL7 1025 aa10.62□□□□□ -0.71
CTDSPL2-201ENST00000260327 ENOX1Q8TC92 643 aaKnown RBP10.62□□□□□ -0.71
CTDSPL2-201ENST00000260327 MAIP1Q8WWC4 291 aa10.62□□□□□ -0.71
CTDSPL2-201ENST00000260327 OSBPL1AQ9BXW6 950 aa10.62□□□□□ -0.71
CTDSPL2-201ENST00000260327 IFT122Q9HBG6 1241 aa10.62□□□□□ -0.71
CTDSPL2-201ENST00000260327 PANK4Q9NVE7 773 aa10.62□□□□□ -0.71
CTDSPL2-201ENST00000260327 PASKQ96RG2 1323 aa10.62□□□□□ -0.71
CTDSPL2-201ENST00000260327 SAMD9LQ8IVG5 1584 aa10.62□□□□□ -0.71
CTDSPL2-201ENST00000260327 CLASP1Q7Z460 1538 aa10.62□□□□□ -0.71
CTDSPL2-201ENST00000260327 STMN1P16949 149 aa10.62□□□□□ -0.71
CTDSPL2-201ENST00000260327 PROCA1Q8NCQ7 364 aaPredicted RBP10.62□□□□□ -0.71
CTDSPL2-201ENST00000260327 ZMAT2Q96NC0 199 aaKnown RBP10.62□□□□□ -0.71
CTDSPL2-201ENST00000260327 CENPKQ9BS16 269 aa10.62□□□□□ -0.71
CTDSPL2-201ENST00000260327 CNOT10Q9H9A5 744 aaKnown RBP10.62□□□□□ -0.71
CTDSPL2-201ENST00000260327 DACT3Q96B18 629 aaPredicted RBP10.62□□□□□ -0.71
CTDSPL2-201ENST00000260327 SH3GL3Q99963 347 aa10.62□□□□□ -0.71
CTDSPL2-201ENST00000260327 PLA2R1Q13018 1463 aa10.62□□□□□ -0.71
CTDSPL2-201ENST00000260327 CASP1P29466 404 aa10.62□□□□□ -0.71
CTDSPL2-201ENST00000260327 SLC1A4P43007 532 aa10.62□□□□□ -0.71
CTDSPL2-201ENST00000260327 TPH2Q8IWU9 490 aa10.62□□□□□ -0.71
CTDSPL2-201ENST00000260327 GRK7Q8WTQ7 553 aa10.62□□□□□ -0.71
CTDSPL2-201ENST00000260327 DNAJC17Q9NVM6 304 aaKnown RBP10.62□□□□□ -0.71
CTDSPL2-201ENST00000260327 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.62□□□□□ -0.71
CTDSPL2-201ENST00000260327 MMP1P03956 469 aa10.62□□□□□ -0.71
CTDSPL2-201ENST00000260327 MMEP08473 750 aa10.62□□□□□ -0.71
CTDSPL2-201ENST00000260327 HIPK4Q8NE63 616 aa10.62□□□□□ -0.71
CTDSPL2-201ENST00000260327 ATP2A3Q93084 1043 aa10.62□□□□□ -0.71
CTDSPL2-201ENST00000260327 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.62□□□□□ -0.71
CTDSPL2-201ENST00000260327 GNPATO15228 680 aa10.61□□□□□ -0.71
CTDSPL2-201ENST00000260327 PRKAB2O43741 272 aa10.61□□□□□ -0.71
CTDSPL2-201ENST00000260327 PTPN12Q05209 780 aaKnown RBP10.61□□□□□ -0.71
CTDSPL2-201ENST00000260327 AFAP1L2Q8N4X5 818 aa10.61□□□□□ -0.71
CTDSPL2-201ENST00000260327 MESDQ14696 234 aa10.61□□□□□ -0.71
CTDSPL2-201ENST00000260327 LRRC41Q15345 812 aa10.61□□□□□ -0.71
CTDSPL2-201ENST00000260327 ZBTB38Q8NAP3 1195 aaPredicted RBP10.61□□□□□ -0.71
CTDSPL2-201ENST00000260327 EYA3Q99504 573 aa10.61□□□□□ -0.71
CTDSPL2-201ENST00000260327 GNA14O95837 355 aa10.61□□□□□ -0.71
CTDSPL2-201ENST00000260327 LONP1P36776 959 aaKnown RBP10.61□□□□□ -0.71
CTDSPL2-201ENST00000260327 PPP2R5EQ16537 467 aa10.61□□□□□ -0.71
CTDSPL2-201ENST00000260327 ST13P4Q8IZP2 240 aaPredicted RBP10.61□□□□□ -0.71
CTDSPL2-201ENST00000260327 CCHCR1Q8TD31 782 aa10.61□□□□□ -0.71
CTDSPL2-201ENST00000260327 NLRP7Q8WX94 980 aa10.61□□□□□ -0.71
CTDSPL2-201ENST00000260327 ANKRD7Q92527 254 aa10.61□□□□□ -0.71
CTDSPL2-201ENST00000260327 TYW1Q9NV66 732 aaKnown RBP10.61□□□□□ -0.71
CTDSPL2-201ENST00000260327 PCDHA12Q9UN75 941 aa10.61□□□□□ -0.71
CTDSPL2-201ENST00000260327 CYP2E1P05181 493 aaPredicted RBP10.61□□□□□ -0.71
CTDSPL2-201ENST00000260327 ADAM9Q13443 819 aa10.61□□□□□ -0.71
CTDSPL2-201ENST00000260327 NLRP14Q86W24 1093 aa10.61□□□□□ -0.71
CTDSPL2-201ENST00000260327 LZTS2Q9BRK4 669 aa10.61□□□□□ -0.71
CTDSPL2-201ENST00000260327 ARMCX3Q9UH62 379 aaPredicted RBP10.61□□□□□ -0.71
CTDSPL2-201ENST00000260327 KLRF2D3W0D1 207 aa10.61□□□□□ -0.71
CTDSPL2-201ENST00000260327 PGRMC1O00264 195 aaKnown RBP10.61□□□□□ -0.71
CTDSPL2-201ENST00000260327 MGEA5O60502 916 aa10.61□□□□□ -0.71
CTDSPL2-201ENST00000260327 SLFN14P0C7P3 912 aa10.61□□□□□ -0.71
CTDSPL2-201ENST00000260327 EIF4A3P38919 411 aaKnown RBP10.61□□□□□ -0.71
CTDSPL2-201ENST00000260327 TCP10Q12799 353 aa10.61□□□□□ -0.71
CTDSPL2-201ENST00000260327 TMTC3Q6ZXV5 915 aa10.61□□□□□ -0.71
CTDSPL2-201ENST00000260327 NEK8Q86SG6 692 aa10.61□□□□□ -0.71
CTDSPL2-201ENST00000260327 PANX2Q96RD6 677 aa10.61□□□□□ -0.71
CTDSPL2-201ENST00000260327 ZSWIM5Q9P217 1185 aa10.61□□□□□ -0.71
CTDSPL2-201ENST00000260327 TRPM1Q7Z4N2 1603 aa10.61□□□□□ -0.71
CTDSPL2-201ENST00000260327 IGSF1Q8N6C5 1336 aa10.61□□□□□ -0.71
CTDSPL2-201ENST00000260327 TRIP13Q15645 432 aaPredicted RBP10.61□□□□□ -0.71
CTDSPL2-201ENST00000260327 ARHGEF18Q6ZSZ5 1173 aa10.61□□□□□ -0.71
CTDSPL2-201ENST00000260327 DHX40Q8IX18 779 aaKnown RBP10.61□□□□□ -0.71
CTDSPL2-201ENST00000260327 OGFOD1Q8N543 542 aa10.61□□□□□ -0.71
CTDSPL2-201ENST00000260327 UBE3CQ15386 1083 aa10.6□□□□□ -0.71
CTDSPL2-201ENST00000260327 HDAC6Q9UBN7 1215 aa10.6□□□□□ -0.71
CTDSPL2-201ENST00000260327 PCDHA13Q9Y5I0 950 aa10.6□□□□□ -0.71
CTDSPL2-201ENST00000260327 KIF1BO60333 1816 aa10.6□□□□□ -0.71
CTDSPL2-201ENST00000260327 SH2B2O14492 632 aaPredicted RBP10.6□□□□□ -0.71
CTDSPL2-201ENST00000260327 RASGRF2O14827 1237 aa10.6□□□□□ -0.71
CTDSPL2-201ENST00000260327 CFBP00751 764 aa10.6□□□□□ -0.71
CTDSPL2-201ENST00000260327 SMTNP53814 917 aa10.6□□□□□ -0.71
CTDSPL2-201ENST00000260327 PRPF38AQ8NAV1 312 aaKnown RBP10.6□□□□□ -0.71
CTDSPL2-201ENST00000260327 MLXIPLQ9NP71 852 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms