RNA–Protein interactions for RNA: ENST00000259043.11

TRA2B-201, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-201ENST00000259043 POMZP3Q6PJE2 187 aa7.74□□□□□ -1.17
TRA2B-201ENST00000259043 CRACR2BQ8N4Y2 399 aaPredicted RBP7.74□□□□□ -1.17
TRA2B-201ENST00000259043 CELF2-AS1Q8N7Q2 184 aa7.74□□□□□ -1.17
TRA2B-201ENST00000259043 NKX2-4Q9H2Z4 354 aa7.74□□□□□ -1.17
TRA2B-201ENST00000259043 CYP26B1Q9NR63 512 aa7.74□□□□□ -1.17
TRA2B-201ENST00000259043 A0A1W2PQ27 194 aa7.73□□□□□ -1.17
TRA2B-201ENST00000259043 A0A1W2PQ64 194 aa7.73□□□□□ -1.17
TRA2B-201ENST00000259043 A0A1W2PQC6 194 aa7.73□□□□□ -1.17
TRA2B-201ENST00000259043 A0A1W2PQD8 194 aa7.73□□□□□ -1.17
TRA2B-201ENST00000259043 DDAH1O94760 285 aa7.73□□□□□ -1.17
TRA2B-201ENST00000259043 ITGAVP06756 1048 aa7.73□□□□□ -1.17
TRA2B-201ENST00000259043 PAMP19021 973 aa7.73□□□□□ -1.17
TRA2B-201ENST00000259043 TMEM62Q0P6H9 643 aa7.73□□□□□ -1.17
TRA2B-201ENST00000259043 EFEMP1Q12805 493 aa7.73□□□□□ -1.17
TRA2B-201ENST00000259043 SPATS1Q496A3 300 aa7.73□□□□□ -1.17
TRA2B-201ENST00000259043 MBLAC2Q68D91 279 aa7.73□□□□□ -1.17
TRA2B-201ENST00000259043 KRTAP5-3Q6L8H2 238 aa7.73□□□□□ -1.17
TRA2B-201ENST00000259043 LDHDQ86WU2 507 aa7.73□□□□□ -1.17
TRA2B-201ENST00000259043 ZNF227Q86WZ6 799 aa7.73□□□□□ -1.17
TRA2B-201ENST00000259043 CPNE8Q86YQ8 564 aa7.73□□□□□ -1.17
TRA2B-201ENST00000259043 IGDCC3Q8IVU1 814 aa7.73□□□□□ -1.17
TRA2B-201ENST00000259043 ADAM7Q9H2U9 754 aa7.73□□□□□ -1.17
TRA2B-201ENST00000259043 GPRC5CQ9NQ84 441 aa7.73□□□□□ -1.17
TRA2B-201ENST00000259043 NPHP3-ACAD11A0A0J9YXS1 232 aa7.72□□□□□ -1.17
TRA2B-201ENST00000259043 NOP56O00567 594 aaKnown RBP7.72□□□□□ -1.17
TRA2B-201ENST00000259043 CYBBP04839 570 aa7.72□□□□□ -1.17
TRA2B-201ENST00000259043 THBDP07204 575 aa7.72□□□□□ -1.17
TRA2B-201ENST00000259043 GLI4P10075 376 aa7.72□□□□□ -1.17
TRA2B-201ENST00000259043 TACR1P25103 407 aa7.72□□□□□ -1.17
TRA2B-201ENST00000259043 MAPKAPK2P49137 400 aa7.72□□□□□ -1.17
TRA2B-201ENST00000259043 ZC3H6P61129 1189 aaKnown RBP7.72□□□□□ -1.17
TRA2B-201ENST00000259043 NR1I3Q14994 352 aa7.72□□□□□ -1.17
TRA2B-201ENST00000259043 PAQR3Q6TCH7 311 aa7.72□□□□□ -1.17
TRA2B-201ENST00000259043 ANKS3Q6ZW76 656 aa7.72□□□□□ -1.17
TRA2B-201ENST00000259043 TMC6Q7Z403 805 aa7.72□□□□□ -1.17
TRA2B-201ENST00000259043 NPLOC4Q8TAT6 608 aa7.72□□□□□ -1.17
TRA2B-201ENST00000259043 FRS2Q8WU20 508 aa7.72□□□□□ -1.17
TRA2B-201ENST00000259043 PWWP2AQ96N64 755 aa7.72□□□□□ -1.17
TRA2B-201ENST00000259043 MMP19Q99542 508 aa7.72□□□□□ -1.17
TRA2B-201ENST00000259043 MTA3Q9BTC8 594 aa7.72□□□□□ -1.17
TRA2B-201ENST00000259043 TMPRSS5Q9H3S3 457 aa7.72□□□□□ -1.17
TRA2B-201ENST00000259043 CLEC1BQ9P126 229 aa7.72□□□□□ -1.17
TRA2B-201ENST00000259043 HCFC2Q9Y5Z7 792 aa7.72□□□□□ -1.17
TRA2B-201ENST00000259043 ATAD2BQ9ULI0 1458 aa7.72□□□□□ -1.17
TRA2B-201ENST00000259043 IRS2Q9Y4H2 1338 aa7.72□□□□□ -1.17
TRA2B-201ENST00000259043 TRBV23OR9-2A0A075B6M9 112 aa7.71□□□□□ -1.18
TRA2B-201ENST00000259043 C7orf72A4D263 438 aa7.71□□□□□ -1.18
TRA2B-201ENST00000259043 ARNTLO00327 626 aa7.71□□□□□ -1.18
TRA2B-201ENST00000259043 PLS3P13797 630 aa7.71□□□□□ -1.18
TRA2B-201ENST00000259043 FBLN1P23142 703 aa7.71□□□□□ -1.18
TRA2B-201ENST00000259043 ZXDCQ2QGD7 858 aaPredicted RBP7.71□□□□□ -1.18
TRA2B-201ENST00000259043 BTN2A2Q8WVV5 523 aa7.71□□□□□ -1.18
TRA2B-201ENST00000259043 PLA2G2DQ9UNK4 145 aa7.71□□□□□ -1.18
TRA2B-201ENST00000259043 PCDHA5Q9Y5H7 936 aa7.71□□□□□ -1.18
TRA2B-201ENST00000259043 SCG5P05408 212 aa7.7□□□□□ -1.18
TRA2B-201ENST00000259043 PLP2Q04941 152 aa7.7□□□□□ -1.18
TRA2B-201ENST00000259043 DDR2Q16832 855 aa7.7□□□□□ -1.18
TRA2B-201ENST00000259043 SLC10A6Q3KNW5 377 aa7.7□□□□□ -1.18
TRA2B-201ENST00000259043 SV2CQ496J9 727 aa7.7□□□□□ -1.18
TRA2B-201ENST00000259043 NAALADL2Q58DX5 795 aa7.7□□□□□ -1.18
TRA2B-201ENST00000259043 BICRALQ6AI39 1079 aa7.7□□□□□ -1.18
TRA2B-201ENST00000259043 PPP1R14AQ96A00 147 aa7.7□□□□□ -1.18
TRA2B-201ENST00000259043 GULP1Q9UBP9 304 aa7.7□□□□□ -1.18
TRA2B-201ENST00000259043 RWDD3Q9Y3V2 267 aa7.7□□□□□ -1.18
TRA2B-201ENST00000259043 SF1Q15637 639 aaKnown RBP7.69□□□□□ -1.18
TRA2B-201ENST00000259043 INF2Q27J81 1249 aa7.69□□□□□ -1.18
TRA2B-201ENST00000259043 ZC3H14Q6PJT7 736 aaKnown RBP7.69□□□□□ -1.18
TRA2B-201ENST00000259043 EEPD1Q7L9B9 569 aa7.69□□□□□ -1.18
TRA2B-201ENST00000259043 TP53I13Q8NBR0 393 aaPredicted RBP7.69□□□□□ -1.18
TRA2B-201ENST00000259043 KREMEN2Q8NCW0 462 aa7.69□□□□□ -1.18
TRA2B-201ENST00000259043 DPF3Q92784 378 aa7.69□□□□□ -1.18
TRA2B-201ENST00000259043 HMGXB3Q12766 1538 aa7.68□□□□□ -1.18
TRA2B-201ENST00000259043 BUB1BO60566 1050 aaPredicted RBP7.68□□□□□ -1.18
TRA2B-201ENST00000259043 CAP1Q01518 475 aa7.68□□□□□ -1.18
TRA2B-201ENST00000259043 CCDC103Q8IW40 242 aa7.68□□□□□ -1.18
TRA2B-201ENST00000259043 LZTR1Q8N653 840 aa7.68□□□□□ -1.18
TRA2B-201ENST00000259043 BDH2Q9BUT1 245 aa7.68□□□□□ -1.18
TRA2B-201ENST00000259043 EPN3Q9H201 632 aa7.68□□□□□ -1.18
TRA2B-201ENST00000259043 ST7Q9NRC1 585 aa7.68□□□□□ -1.18
TRA2B-201ENST00000259043 TMEFF2Q9UIK5 374 aaPredicted RBP7.68□□□□□ -1.18
TRA2B-201ENST00000259043 IGFBP6P24592 240 aaPredicted RBP7.67□□□□□ -1.18
TRA2B-201ENST00000259043 HOXC12P31275 282 aa7.67□□□□□ -1.18
TRA2B-201ENST00000259043 ZNF200P98182 395 aaPredicted RBP7.67□□□□□ -1.18
TRA2B-201ENST00000259043 TESK1Q15569 626 aa7.67□□□□□ -1.18
TRA2B-201ENST00000259043 PLEKHO2Q8TD55 490 aa7.67□□□□□ -1.18
TRA2B-201ENST00000259043 C1orf159Q96HA4 380 aa7.67□□□□□ -1.18
TRA2B-201ENST00000259043 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.67□□□□□ -1.187e-7■■■■□ 20.8
TRA2B-201ENST00000259043 A0A1W2PQJ5 194 aa7.66□□□□□ -1.18
TRA2B-201ENST00000259043 A0A1W2PQU0 124 aa7.66□□□□□ -1.18
TRA2B-201ENST00000259043 F8W031 263 aaPredicted RBP7.66□□□□□ -1.18
TRA2B-201ENST00000259043 NPHS1O60500 1241 aa7.66□□□□□ -1.18
TRA2B-201ENST00000259043 GRIA2P42262 883 aa7.66□□□□□ -1.18
TRA2B-201ENST00000259043 KCNC1P48547 511 aa7.66□□□□□ -1.18
TRA2B-201ENST00000259043 NCKAP1LP55160 1127 aa7.66□□□□□ -1.18
TRA2B-201ENST00000259043 GFRA1P56159 465 aa7.66□□□□□ -1.18
TRA2B-201ENST00000259043 PRR5P85299 388 aa7.66□□□□□ -1.18
TRA2B-201ENST00000259043 RAB33AQ14088 237 aa7.66□□□□□ -1.18
TRA2B-201ENST00000259043 PRSS53Q2L4Q9 553 aa7.66□□□□□ -1.18
TRA2B-201ENST00000259043 DENND5AQ6IQ26 1287 aa7.66□□□□□ -1.18
TRA2B-201ENST00000259043 NLGN1Q8N2Q7 840 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms