RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 ARHGAP33O14559 1287 aa8.49□□□□□ -1.05
GPNMB-201ENST00000258733 EIF3HO15372 352 aaKnown RBP eCLIP8.49□□□□□ -1.05
GPNMB-201ENST00000258733 MRPS35P82673 323 aaKnown RBP8.49□□□□□ -1.05
GPNMB-201ENST00000258733 ADAM9Q13443 819 aa8.49□□□□□ -1.05
GPNMB-201ENST00000258733 SAFB2Q14151 953 aaKnown RBP eCLIP8.49□□□□□ -1.05
GPNMB-201ENST00000258733 STK11Q15831 433 aa8.49□□□□□ -1.05
GPNMB-201ENST00000258733 SGSM1Q2NKQ1 1148 aa8.49□□□□□ -1.05
GPNMB-201ENST00000258733 CFAP100Q494V2 611 aa8.49□□□□□ -1.05
GPNMB-201ENST00000258733 RNF187Q5TA31 235 aaPredicted RBP8.49□□□□□ -1.05
GPNMB-201ENST00000258733 SH3BP5LQ7L8J4 393 aa8.49□□□□□ -1.05
GPNMB-201ENST00000258733 CNBD1Q8NA66 436 aa8.49□□□□□ -1.05
GPNMB-201ENST00000258733 KIFAP3Q92845 792 aa8.49□□□□□ -1.05
GPNMB-201ENST00000258733 CCDC127Q96BQ5 260 aa8.49□□□□□ -1.05
GPNMB-201ENST00000258733 SDCCAG3Q96C92 435 aa8.49□□□□□ -1.05
GPNMB-201ENST00000258733 C8orf37Q96NL8 207 aa8.49□□□□□ -1.05
GPNMB-201ENST00000258733 TRAPPC9Q96Q05 1148 aa8.49□□□□□ -1.05
GPNMB-201ENST00000258733 EURLQ9NYK6 297 aa8.49□□□□□ -1.05
GPNMB-201ENST00000258733 SEC63Q9UGP8 760 aaKnown RBP8.49□□□□□ -1.05
GPNMB-201ENST00000258733 ZC3H7BQ9UGR2 993 aaKnown RBP8.49□□□□□ -1.05
GPNMB-201ENST00000258733 ZBTB1Q9Y2K1 713 aa8.49□□□□□ -1.05
GPNMB-201ENST00000258733 FAM32AQ9Y421 112 aaKnown RBP8.49□□□□□ -1.05
GPNMB-201ENST00000258733 SLC4A4Q9Y6R1 1079 aa8.49□□□□□ -1.05
GPNMB-201ENST00000258733 ARHGEF12Q9NZN5 1544 aa8.49□□□□□ -1.05
GPNMB-201ENST00000258733 GOLGA8IPA6NC78 632 aa8.48□□□□□ -1.05
GPNMB-201ENST00000258733 GNAT3A8MTJ3 354 aa8.48□□□□□ -1.05
GPNMB-201ENST00000258733 ATP6V1G2O95670 118 aa8.48□□□□□ -1.05
GPNMB-201ENST00000258733 MX1P20591 662 aa8.48□□□□□ -1.05
GPNMB-201ENST00000258733 TKTP29401 623 aaKnown RBP8.48□□□□□ -1.05
GPNMB-201ENST00000258733 HAAOP46952 286 aa8.48□□□□□ -1.05
GPNMB-201ENST00000258733 STIM1Q13586 685 aa8.48□□□□□ -1.05
GPNMB-201ENST00000258733 MAP3K11Q16584 847 aa8.48□□□□□ -1.05
GPNMB-201ENST00000258733 CCDC14Q49A88 953 aa8.48□□□□□ -1.05
GPNMB-201ENST00000258733 PPP2R2DQ66LE6 453 aa8.48□□□□□ -1.05
GPNMB-201ENST00000258733 KCTD16Q68DU8 428 aa8.48□□□□□ -1.05
GPNMB-201ENST00000258733 CYP26C1Q6V0L0 522 aa8.48□□□□□ -1.05
GPNMB-201ENST00000258733 TXNDC2Q86VQ3 553 aa8.48□□□□□ -1.05
GPNMB-201ENST00000258733 SCUBE1Q8IWY4 988 aa8.48□□□□□ -1.05
GPNMB-201ENST00000258733 ARHGEF2Q92974 986 aaKnown RBP8.48□□□□□ -1.05
GPNMB-201ENST00000258733 NELL2Q99435 816 aa8.48□□□□□ -1.05
GPNMB-201ENST00000258733 FUCA2Q9BTY2 467 aa8.48□□□□□ -1.05
GPNMB-201ENST00000258733 RTFDC1Q9BY42 306 aaPredicted RBP8.48□□□□□ -1.05
GPNMB-201ENST00000258733 L1RE1Q9UN81 338 aa8.48□□□□□ -1.05
GPNMB-201ENST00000258733 FADS3Q9Y5Q0 445 aa8.48□□□□□ -1.05
GPNMB-201ENST00000258733 CDHR2Q9BYE9 1310 aa8.48□□□□□ -1.05
GPNMB-201ENST00000258733 PPIP5K1Q6PFW1 1433 aa8.48□□□□□ -1.05
GPNMB-201ENST00000258733 LAMC1P11047 1609 aa8.48□□□□□ -1.05
GPNMB-201ENST00000258733 UHRF1BP1Q6BDS2 1440 aa8.48□□□□□ -1.05
GPNMB-201ENST00000258733 CCDC162PA2VCL2 907 aa8.48□□□□□ -1.05
GPNMB-201ENST00000258733 SPECC1L-ADORA2AF8WAN1 911 aa8.48□□□□□ -1.05
GPNMB-201ENST00000258733 IGF2BP3O00425 579 aaKnown RBP eCLIP8.48□□□□□ -1.05
GPNMB-201ENST00000258733 CDK2AP1O14519 115 aa8.48□□□□□ -1.05
GPNMB-201ENST00000258733 KLHL41O60662 606 aa8.48□□□□□ -1.05
GPNMB-201ENST00000258733 PRPF6O94906 941 aaKnown RBP8.48□□□□□ -1.05
GPNMB-201ENST00000258733 WEE1P30291 646 aa8.48□□□□□ -1.05
GPNMB-201ENST00000258733 ITGB3BPQ13352 177 aaPredicted RBP8.48□□□□□ -1.05
GPNMB-201ENST00000258733 BYSLQ13895 437 aaKnown RBP8.48□□□□□ -1.05
GPNMB-201ENST00000258733 GNA13Q14344 377 aa8.48□□□□□ -1.05
GPNMB-201ENST00000258733 PPFIBP2Q8ND30 876 aa8.48□□□□□ -1.05
GPNMB-201ENST00000258733 TOR1AIP2Q8NFQ8 470 aa8.48□□□□□ -1.05
GPNMB-201ENST00000258733 LEO1Q8WVC0 666 aaPredicted RBP8.48□□□□□ -1.05
GPNMB-201ENST00000258733 IFT81Q8WYA0 676 aa8.48□□□□□ -1.05
GPNMB-201ENST00000258733 ABTB1Q969K4 478 aaPredicted RBP8.48□□□□□ -1.05
GPNMB-201ENST00000258733 MTMR9Q96QG7 549 aa8.48□□□□□ -1.05
GPNMB-201ENST00000258733 DNAJC18Q9H819 358 aa8.48□□□□□ -1.05
GPNMB-201ENST00000258733 PAG1Q9NWQ8 432 aa8.48□□□□□ -1.05
GPNMB-201ENST00000258733 STAP2Q9UGK3 403 aa8.48□□□□□ -1.05
GPNMB-201ENST00000258733 NOX1Q9Y5S8 564 aa8.48□□□□□ -1.05
GPNMB-201ENST00000258733 PHLPP2Q6ZVD8 1323 aa8.48□□□□□ -1.05
GPNMB-201ENST00000258733 TMEM238LA0A1B0GVL6 79 aa8.47□□□□□ -1.05
GPNMB-201ENST00000258733 OXSR1O95747 527 aaPredicted RBP8.47□□□□□ -1.05
GPNMB-201ENST00000258733 NR2C2P49116 596 aa8.47□□□□□ -1.05
GPNMB-201ENST00000258733 KLHL30Q0D2K2 578 aa8.47□□□□□ -1.05
GPNMB-201ENST00000258733 IGSF11Q5DX21 431 aa8.47□□□□□ -1.05
GPNMB-201ENST00000258733 TMEM214Q6NUQ4 689 aaKnown RBP8.47□□□□□ -1.05
GPNMB-201ENST00000258733 PDXDC2PQ6P474 469 aa8.47□□□□□ -1.05
GPNMB-201ENST00000258733 ZNF600Q6ZNG1 722 aa8.47□□□□□ -1.05
GPNMB-201ENST00000258733 RSRC2Q7L4I2 434 aaKnown RBP8.47□□□□□ -1.05
GPNMB-201ENST00000258733 SPARTQ8N0X7 666 aa8.47□□□□□ -1.05
GPNMB-201ENST00000258733 ALG1Q9BT22 464 aa8.47□□□□□ -1.05
GPNMB-201ENST00000258733 TRIM5Q9C035 493 aa8.47□□□□□ -1.05
GPNMB-201ENST00000258733 SRCIN1Q9C0H9 1055 aa8.47□□□□□ -1.05
GPNMB-201ENST00000258733 XAB2Q9HCS7 855 aaKnown RBP8.47□□□□□ -1.05
GPNMB-201ENST00000258733 ARHGEF38Q9NXL2 777 aa8.47□□□□□ -1.05
GPNMB-201ENST00000258733 IL20Q9NYY1 176 aa8.47□□□□□ -1.05
GPNMB-201ENST00000258733 HMGXB4Q9UGU5 601 aa8.47□□□□□ -1.05
GPNMB-201ENST00000258733 PFDN2Q9UHV9 154 aa8.47□□□□□ -1.05
GPNMB-201ENST00000258733 ARHGEF5Q12774 1597 aa8.47□□□□□ -1.05
GPNMB-201ENST00000258733 ASXL2Q76L83 1435 aa8.47□□□□□ -1.05
GPNMB-201ENST00000258733 PSMD14O00487 310 aa8.47□□□□□ -1.05
GPNMB-201ENST00000258733 HAT1O14929 419 aa8.47□□□□□ -1.05
GPNMB-201ENST00000258733 PYGMP11217 842 aa8.47□□□□□ -1.05
GPNMB-201ENST00000258733 HPDP32754 393 aaPredicted RBP8.47□□□□□ -1.05
GPNMB-201ENST00000258733 SARSP49591 514 aaKnown RBP8.47□□□□□ -1.05
GPNMB-201ENST00000258733 ZNF75DP51815 510 aa8.47□□□□□ -1.05
GPNMB-201ENST00000258733 KRT83P78385 493 aa8.47□□□□□ -1.05
GPNMB-201ENST00000258733 TTC39AQ5SRH9 613 aa8.47□□□□□ -1.05
GPNMB-201ENST00000258733 KIAA1614Q5VZ46 1190 aa8.47□□□□□ -1.05
GPNMB-201ENST00000258733 FAM20AQ96MK3 541 aa8.47□□□□□ -1.05
GPNMB-201ENST00000258733 HERC2P3Q9BVR0 1158 aa8.47□□□□□ -1.05
GPNMB-201ENST00000258733 MOV10L1Q9BXT6 1211 aaKnown RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms