RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 NFIBO00712 420 aa10.72□□□□□ -0.69
NIP7-202ENST00000254941 SLC37A4O43826 429 aa10.72□□□□□ -0.69
NIP7-202ENST00000254941 CYP3A4P08684 503 aa10.72□□□□□ -0.69
NIP7-202ENST00000254941 ALAS1P13196 640 aa10.72□□□□□ -0.69
NIP7-202ENST00000254941 CALCRLQ16602 461 aa10.72□□□□□ -0.69
NIP7-202ENST00000254941 SYMPKQ92797 1274 aaKnown RBP10.72□□□□□ -0.69
NIP7-202ENST00000254941 MBOAT7Q96N66 472 aa10.72□□□□□ -0.69
NIP7-202ENST00000254941 SDF4Q9BRK5 362 aa10.72□□□□□ -0.69
NIP7-202ENST00000254941 FUCA2Q9BTY2 467 aa10.72□□□□□ -0.69
NIP7-202ENST00000254941 GBA2Q9HCG7 927 aaPredicted RBP10.72□□□□□ -0.69
NIP7-202ENST00000254941 DDX25Q9UHL0 483 aaKnown RBP10.72□□□□□ -0.69
NIP7-202ENST00000254941 POLR2DO15514 142 aaKnown RBP10.71□□□□□ -0.69
NIP7-202ENST00000254941 CIITAP33076 1130 aa10.71□□□□□ -0.69
NIP7-202ENST00000254941 GJA5P36382 358 aa10.71□□□□□ -0.69
NIP7-202ENST00000254941 MOGSQ13724 837 aa10.71□□□□□ -0.69
NIP7-202ENST00000254941 TMEM132BQ14DG7 1078 aa10.71□□□□□ -0.69
NIP7-202ENST00000254941 LONRF3Q496Y0 759 aa10.71□□□□□ -0.69
NIP7-202ENST00000254941 MUM1L1Q5H9M0 696 aa10.71□□□□□ -0.69
NIP7-202ENST00000254941 GADL1Q6ZQY3 521 aa10.71□□□□□ -0.69
NIP7-202ENST00000254941 FASTKD5Q7L8L6 764 aaKnown RBP10.71□□□□□ -0.69
NIP7-202ENST00000254941 FCHSD1Q86WN1 690 aa10.71□□□□□ -0.69
NIP7-202ENST00000254941 CKAP2LQ8IYA6 745 aa10.71□□□□□ -0.69
NIP7-202ENST00000254941 ELOA2Q8IYF1 753 aaPredicted RBP10.71□□□□□ -0.69
NIP7-202ENST00000254941 ZNF526Q8TF50 670 aaPredicted RBP10.71□□□□□ -0.69
NIP7-202ENST00000254941 AK8Q96MA6 479 aa10.71□□□□□ -0.69
NIP7-202ENST00000254941 TRERF1Q96PN7 1200 aa10.71□□□□□ -0.69
NIP7-202ENST00000254941 AGTPBP1Q9UPW5 1226 aa10.71□□□□□ -0.69
NIP7-202ENST00000254941 RIPK3Q9Y572 518 aa10.71□□□□□ -0.69
NIP7-202ENST00000254941 ITGBL1O95965 494 aaPredicted RBP10.7□□□□□ -0.7
NIP7-202ENST00000254941 SNAPC2Q13487 334 aa10.7□□□□□ -0.7
NIP7-202ENST00000254941 SNRNP48Q6IEG0 339 aaKnown RBP10.7□□□□□ -0.7
NIP7-202ENST00000254941 LBX2Q6XYB7 198 aa10.7□□□□□ -0.7
NIP7-202ENST00000254941 KRBA2Q6ZNG9 492 aa10.7□□□□□ -0.7
NIP7-202ENST00000254941 MB21D1Q8N884 522 aa10.7□□□□□ -0.7
NIP7-202ENST00000254941 C2orf69Q8N8R5 385 aa10.7□□□□□ -0.7
NIP7-202ENST00000254941 IGSF22Q8N9C0 903 aa10.7□□□□□ -0.7
NIP7-202ENST00000254941 TEX13BQ9BXU2 312 aa10.7□□□□□ -0.7
NIP7-202ENST00000254941 TSPY26PQ9H489 355 aa10.7□□□□□ -0.7
NIP7-202ENST00000254941 EHMT1Q9H9B1 1298 aa10.7□□□□□ -0.7
NIP7-202ENST00000254941 HOMER2Q9NSB8 354 aa10.7□□□□□ -0.7
NIP7-202ENST00000254941 LCTP09848 1927 aa10.7□□□□□ -0.7
NIP7-202ENST00000254941 KIAA1217Q5T5P2 1943 aa10.7□□□□□ -0.7
NIP7-202ENST00000254941 ZNFX1Q9P2E3 1918 aaKnown RBP10.7□□□□□ -0.7
NIP7-202ENST00000254941 A0A087X0B3 334 aa10.7□□□□□ -0.7
NIP7-202ENST00000254941 CELF2O95319 508 aaKnown RBP10.7□□□□□ -0.7
NIP7-202ENST00000254941 CCDC192P0DO97 292 aa10.7□□□□□ -0.7
NIP7-202ENST00000254941 TXKP42681 527 aa10.7□□□□□ -0.7
NIP7-202ENST00000254941 Q4G0T1 1027 aa10.7□□□□□ -0.7
NIP7-202ENST00000254941 CHADLQ6NUI6 762 aa10.7□□□□□ -0.7
NIP7-202ENST00000254941 POTEEQ6S8J3 1075 aa10.7□□□□□ -0.7
NIP7-202ENST00000254941 HAS1Q92839 578 aa10.7□□□□□ -0.7
NIP7-202ENST00000254941 LENG9Q96B70 501 aa10.7□□□□□ -0.7
NIP7-202ENST00000254941 PYM1Q9BRP8 204 aaKnown RBP10.7□□□□□ -0.7
NIP7-202ENST00000254941 CCSER1Q9C0I3 900 aa10.7□□□□□ -0.7
NIP7-202ENST00000254941 MAF1Q9H063 256 aa10.7□□□□□ -0.7
NIP7-202ENST00000254941 ASCC2Q9H1I8 757 aaPredicted RBP10.7□□□□□ -0.7
NIP7-202ENST00000254941 KCNMB3Q9NPA1 279 aa10.7□□□□□ -0.7
NIP7-202ENST00000254941 FAM86B1E9PN63 330 aa10.69□□□□□ -0.7
NIP7-202ENST00000254941 ACTN4O43707 911 aaKnown RBP10.69□□□□□ -0.7
NIP7-202ENST00000254941 FAM86B2P0C5J1 330 aa10.69□□□□□ -0.7
NIP7-202ENST00000254941 TXLNAP40222 546 aa10.69□□□□□ -0.7
NIP7-202ENST00000254941 STAT3P40763 770 aa10.69□□□□□ -0.7
NIP7-202ENST00000254941 TECP42680 631 aa10.69□□□□□ -0.7
NIP7-202ENST00000254941 RPS6P62753 249 aaKnown RBP10.69□□□□□ -0.7
NIP7-202ENST00000254941 IRX3P78415 501 aaPredicted RBP10.69□□□□□ -0.7
NIP7-202ENST00000254941 PDIA5Q14554 519 aa10.69□□□□□ -0.7
NIP7-202ENST00000254941 TKFCQ3LXA3 575 aa10.69□□□□□ -0.7
NIP7-202ENST00000254941 CST9Q5W186 159 aa10.69□□□□□ -0.7
NIP7-202ENST00000254941 GPAT2Q6NUI2 795 aa10.69□□□□□ -0.7
NIP7-202ENST00000254941 KANK3Q6NY19 840 aa10.69□□□□□ -0.7
NIP7-202ENST00000254941 PDILTQ8N807 584 aa10.69□□□□□ -0.7
NIP7-202ENST00000254941 CNNM3Q8NE01 707 aa10.69□□□□□ -0.7
NIP7-202ENST00000254941 PANK2Q9BZ23 570 aa10.69□□□□□ -0.7
NIP7-202ENST00000254941 TTC12Q9H892 705 aaPredicted RBP10.69□□□□□ -0.7
NIP7-202ENST00000254941 RNF146Q9NTX7 359 aa10.69□□□□□ -0.7
NIP7-202ENST00000254941 COL20A1Q9P218 1284 aa10.69□□□□□ -0.7
NIP7-202ENST00000254941 KIAA1468Q9P260 1216 aa10.69□□□□□ -0.7
NIP7-202ENST00000254941 USP25Q9UHP3 1055 aa10.69□□□□□ -0.7
NIP7-202ENST00000254941 RABGAP1Q9Y3P9 1069 aa10.69□□□□□ -0.7
NIP7-202ENST00000254941 RPTORQ8N122 1335 aa10.69□□□□□ -0.7
NIP7-202ENST00000254941 IGLV3-22A0A075B6J6 115 aa10.68□□□□□ -0.7
NIP7-202ENST00000254941 TBX3O15119 743 aa10.68□□□□□ -0.7
NIP7-202ENST00000254941 SLFN14P0C7P3 912 aa10.68□□□□□ -0.7
NIP7-202ENST00000254941 CDC25AP30304 524 aa10.68□□□□□ -0.7
NIP7-202ENST00000254941 UBA7P41226 1012 aa10.68□□□□□ -0.7
NIP7-202ENST00000254941 HERVK_113P62684 666 aa10.68□□□□□ -0.7
NIP7-202ENST00000254941 MDM2Q00987 491 aaPredicted RBP10.68□□□□□ -0.7
NIP7-202ENST00000254941 TYRO3Q06418 890 aa10.68□□□□□ -0.7
NIP7-202ENST00000254941 PABPC4Q13310 644 aaKnown RBP eCLIP10.68□□□□□ -0.73e-24■■■■■ 72
NIP7-202ENST00000254941 E2F4Q16254 413 aa10.68□□□□□ -0.7
NIP7-202ENST00000254941 TMEM266Q2M3C6 531 aa10.68□□□□□ -0.7
NIP7-202ENST00000254941 RNF207Q6ZRF8 634 aa10.68□□□□□ -0.7
NIP7-202ENST00000254941 SLFN12Q8IYM2 578 aa10.68□□□□□ -0.7
NIP7-202ENST00000254941 IQUBQ8NA54 791 aa10.68□□□□□ -0.7
NIP7-202ENST00000254941 SPDYE1Q8NFV5 336 aaPredicted RBP10.68□□□□□ -0.7
NIP7-202ENST00000254941 ETNPPLQ8TBG4 499 aa10.68□□□□□ -0.7
NIP7-202ENST00000254941 SYTL5Q8TDW5 730 aaPredicted RBP10.68□□□□□ -0.7
NIP7-202ENST00000254941 MS4A4AQ96JQ5 239 aa10.68□□□□□ -0.7
NIP7-202ENST00000254941 RAB34Q9BZG1 259 aa10.68□□□□□ -0.7
NIP7-202ENST00000254941 SERTAD1Q9UHV2 236 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms