RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 IFIH1Q9BYX4 1025 aaKnown RBP16.52■□□□□ 0.24
UBE4B-201ENST00000253251 TNNC2P02585 160 aa16.52■□□□□ 0.23
UBE4B-201ENST00000253251 COPB2P35606 906 aa16.52■□□□□ 0.23
UBE4B-201ENST00000253251 GJC1P36383 396 aa16.52■□□□□ 0.23
UBE4B-201ENST00000253251 ACCSQ96QU6 501 aa16.52■□□□□ 0.23
UBE4B-201ENST00000253251 CCNE1P24864 410 aa16.51■□□□□ 0.23
UBE4B-201ENST00000253251 NEK9Q8TD19 979 aa16.51■□□□□ 0.23
UBE4B-201ENST00000253251 SPZ1Q9BXG8 430 aa16.51■□□□□ 0.23
UBE4B-201ENST00000253251 HAUS4Q9H6D7 363 aa16.51■□□□□ 0.23
UBE4B-201ENST00000253251 RNF216Q9NWF9 866 aaPredicted RBP16.51■□□□□ 0.23
UBE4B-201ENST00000253251 BARHL2Q9NY43 387 aa16.51■□□□□ 0.23
UBE4B-201ENST00000253251 HDLBPQ00341 1268 aaKnown RBP16.51■□□□□ 0.23
UBE4B-201ENST00000253251 SLFNL1Q499Z3 407 aa16.51■□□□□ 0.23
UBE4B-201ENST00000253251 TRIM58Q8NG06 486 aa16.51■□□□□ 0.23
UBE4B-201ENST00000253251 C1orf112Q9NSG2 853 aa16.51■□□□□ 0.23
UBE4B-201ENST00000253251 ACTN4O43707 911 aaKnown RBP16.51■□□□□ 0.23
UBE4B-201ENST00000253251 PPP2R5EQ16537 467 aa16.51■□□□□ 0.23
UBE4B-201ENST00000253251 MIGA2Q7L4E1 593 aa16.51■□□□□ 0.23
UBE4B-201ENST00000253251 DPP9Q86TI2 863 aa16.51■□□□□ 0.23
UBE4B-201ENST00000253251 AIFM3Q96NN9 605 aa16.51■□□□□ 0.23
UBE4B-201ENST00000253251 UIMC1Q96RL1 719 aa16.51■□□□□ 0.23
UBE4B-201ENST00000253251 MAP3K14Q99558 947 aa16.51■□□□□ 0.23
UBE4B-201ENST00000253251 MAN1B1Q9UKM7 699 aa16.51■□□□□ 0.23
UBE4B-201ENST00000253251 DAGLAQ9Y4D2 1042 aa16.51■□□□□ 0.23
UBE4B-201ENST00000253251 MMP14P50281 582 aa16.51■□□□□ 0.23
UBE4B-201ENST00000253251 PPP1R7Q15435 360 aa16.51■□□□□ 0.23
UBE4B-201ENST00000253251 CNOT6LQ96LI5 555 aaKnown RBP16.51■□□□□ 0.23
UBE4B-201ENST00000253251 DISC1Q9NRI5 854 aa16.51■□□□□ 0.23
UBE4B-201ENST00000253251 KDM4FA0A1W2PPD8 638 aa16.5■□□□□ 0.23
UBE4B-201ENST00000253251 EVCP57679 992 aa16.5■□□□□ 0.23
UBE4B-201ENST00000253251 BPIFB4P59827 614 aa16.5■□□□□ 0.23
UBE4B-201ENST00000253251 PPP1R2P3Q6NXS1 205 aa16.5■□□□□ 0.23
UBE4B-201ENST00000253251 TUBGCP2Q9BSJ2 902 aa16.5■□□□□ 0.23
UBE4B-201ENST00000253251 THAP9Q9H5L6 903 aa16.5■□□□□ 0.23
UBE4B-201ENST00000253251 GINS2Q9Y248 185 aa16.5■□□□□ 0.23
UBE4B-201ENST00000253251 PSAPP07602 524 aa16.5■□□□□ 0.23
UBE4B-201ENST00000253251 ATF7P17544 494 aaPredicted RBP16.5■□□□□ 0.23
UBE4B-201ENST00000253251 PSMC2P35998 433 aaKnown RBP16.5■□□□□ 0.23
UBE4B-201ENST00000253251 JAK3P52333 1124 aa16.5■□□□□ 0.23
UBE4B-201ENST00000253251 MAN2A1Q16706 1144 aa16.5■□□□□ 0.23
UBE4B-201ENST00000253251 BCL9O00512 1426 aa16.5■□□□□ 0.23
UBE4B-201ENST00000253251 PSDA5PKW4 1024 aaPredicted RBP16.5■□□□□ 0.23
UBE4B-201ENST00000253251 POLR3GO15318 223 aaPredicted RBP16.5■□□□□ 0.23
UBE4B-201ENST00000253251 CROCCP2Q86T23 111 aa16.5■□□□□ 0.23
UBE4B-201ENST00000253251 OSBPL5Q9H0X9 879 aaPredicted RBP16.5■□□□□ 0.23
UBE4B-201ENST00000253251 PHLPP2Q6ZVD8 1323 aa16.5■□□□□ 0.23
UBE4B-201ENST00000253251 LRRC63Q05C16 580 aa16.5■□□□□ 0.23
UBE4B-201ENST00000253251 RPS6KA1Q15418 735 aa16.5■□□□□ 0.23
UBE4B-201ENST00000253251 GIMAP8Q8ND71 665 aaPredicted RBP16.5■□□□□ 0.23
UBE4B-201ENST00000253251 USP17L10C9JJH3 530 aa16.49■□□□□ 0.23
UBE4B-201ENST00000253251 METTL13Q8N6R0 699 aa16.49■□□□□ 0.23
UBE4B-201ENST00000253251 SLC10A4Q96EP9 437 aa16.49■□□□□ 0.23
UBE4B-201ENST00000253251 NLRC4Q9NPP4 1024 aa16.49■□□□□ 0.23
UBE4B-201ENST00000253251 TAF12Q16514 161 aa16.49■□□□□ 0.23
UBE4B-201ENST00000253251 PAGE5Q96GU1 130 aa16.49■□□□□ 0.23
UBE4B-201ENST00000253251 ZNF277Q9NRM2 450 aaPredicted RBP16.49■□□□□ 0.23
UBE4B-201ENST00000253251 PXDNQ92626 1479 aa16.49■□□□□ 0.23
UBE4B-201ENST00000253251 ZBTB7AO95365 584 aa16.49■□□□□ 0.23
UBE4B-201ENST00000253251 PLCG1P19174 1290 aa16.49■□□□□ 0.23
UBE4B-201ENST00000253251 PPP4CP60510 307 aa16.49■□□□□ 0.23
UBE4B-201ENST00000253251 GPR161Q8N6U8 529 aaKnown RBP16.49■□□□□ 0.23
UBE4B-201ENST00000253251 XPOTO43592 962 aaKnown RBP16.49■□□□□ 0.23
UBE4B-201ENST00000253251 PLA2G4BP0C869 781 aa16.49■□□□□ 0.23
UBE4B-201ENST00000253251 CD19P15391 556 aa16.49■□□□□ 0.23
UBE4B-201ENST00000253251 CFAP221Q4G0U5 840 aa16.49■□□□□ 0.23
UBE4B-201ENST00000253251 TYW1BQ6NUM6 668 aa16.49■□□□□ 0.23
UBE4B-201ENST00000253251 C8orf74Q6P047 294 aa16.49■□□□□ 0.23
UBE4B-201ENST00000253251 RNF207Q6ZRF8 634 aa16.49■□□□□ 0.23
UBE4B-201ENST00000253251 IPO4Q8TEX9 1081 aaKnown RBP16.49■□□□□ 0.23
UBE4B-201ENST00000253251 FEZ2Q9UHY8 353 aaPredicted RBP16.49■□□□□ 0.23
UBE4B-201ENST00000253251 UBN2Q6ZU65 1347 aa16.49■□□□□ 0.23
UBE4B-201ENST00000253251 F5H6K3 240 aa16.48■□□□□ 0.23
UBE4B-201ENST00000253251 KLRC3Q07444 240 aa16.48■□□□□ 0.23
UBE4B-201ENST00000253251 DPCR1Q3MIW9 517 aa16.48■□□□□ 0.23
UBE4B-201ENST00000253251 DCUN1D2Q6PH85 259 aa16.48■□□□□ 0.23
UBE4B-201ENST00000253251 TBC1D22BQ9NU19 505 aa16.48■□□□□ 0.23
UBE4B-201ENST00000253251 ANAPC4Q9UJX5 808 aa16.48■□□□□ 0.23
UBE4B-201ENST00000253251 PCDHA6Q9UN73 950 aa16.48■□□□□ 0.23
UBE4B-201ENST00000253251 PCDHA8Q9Y5H6 950 aa16.48■□□□□ 0.23
UBE4B-201ENST00000253251 SMARCA1P28370 1054 aa16.48■□□□□ 0.23
UBE4B-201ENST00000253251 YARSP54577 528 aaKnown RBP16.48■□□□□ 0.23
UBE4B-201ENST00000253251 UBE2SQ16763 222 aa16.48■□□□□ 0.23
UBE4B-201ENST00000253251 EXOC3L4Q17RC7 722 aa16.48■□□□□ 0.23
UBE4B-201ENST00000253251 CCDC14Q49A88 953 aa16.48■□□□□ 0.23
UBE4B-201ENST00000253251 STOX1Q6ZVD7 989 aa16.48■□□□□ 0.23
UBE4B-201ENST00000253251 HDXQ7Z353 690 aa16.48■□□□□ 0.23
UBE4B-201ENST00000253251 PRPF38AQ8NAV1 312 aaKnown RBP16.48■□□□□ 0.23
UBE4B-201ENST00000253251 PARVGQ9HBI0 331 aa16.48■□□□□ 0.23
UBE4B-201ENST00000253251 LRRIQ4A6NIV6 560 aa16.48■□□□□ 0.23
UBE4B-201ENST00000253251 NR2F2P24468 414 aa16.48■□□□□ 0.23
UBE4B-201ENST00000253251 CACNB3P54284 484 aa16.48■□□□□ 0.23
UBE4B-201ENST00000253251 LRRC8AQ8IWT6 810 aa16.48■□□□□ 0.23
UBE4B-201ENST00000253251 KIAA1524Q8TCG1 905 aa16.48■□□□□ 0.23
UBE4B-201ENST00000253251 FTOQ9C0B1 505 aaKnown RBP eCLIP16.48■□□□□ 0.23
UBE4B-201ENST00000253251 NSRP1Q9H0G5 558 aaKnown RBP16.48■□□□□ 0.23
UBE4B-201ENST00000253251 NYAP2Q9P242 653 aa16.48■□□□□ 0.23
UBE4B-201ENST00000253251 SEPT9Q9UHD8 586 aaPredicted RBP16.48■□□□□ 0.23
UBE4B-201ENST00000253251 ZNF500O60304 480 aaPredicted RBP16.47■□□□□ 0.23
UBE4B-201ENST00000253251 CDC27P30260 824 aa16.47■□□□□ 0.23
UBE4B-201ENST00000253251 CFAP58Q5T655 872 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms