RNA–Protein interactions for RNA: ENST00000251654.8

PCCB-201, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCCB, Length 1,833 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-201ENST00000251654 PLCG1P19174 1290 aa19.48■□□□□ 0.71
PCCB-201ENST00000251654 CUL4BQ13620 913 aa19.48■□□□□ 0.71
PCCB-201ENST00000251654 MLKLQ8NB16 471 aa19.48■□□□□ 0.71
PCCB-201ENST00000251654 C12orf42Q96LP6 360 aa19.48■□□□□ 0.71
PCCB-201ENST00000251654 AGBL1Q96MI9 1066 aa19.48■□□□□ 0.71
PCCB-201ENST00000251654 RPAP3Q9H6T3 665 aaPredicted RBP19.48■□□□□ 0.71
PCCB-201ENST00000251654 KBTBD4Q9NVX7 518 aa19.48■□□□□ 0.71
PCCB-201ENST00000251654 PPP1R9AQ9ULJ8 1098 aa19.48■□□□□ 0.71
PCCB-201ENST00000251654 USP2O75604 605 aaPredicted RBP19.47■□□□□ 0.71
PCCB-201ENST00000251654 FLOT1O75955 427 aa19.47■□□□□ 0.71
PCCB-201ENST00000251654 CIITAP33076 1130 aa19.47■□□□□ 0.71
PCCB-201ENST00000251654 SULF1Q8IWU6 871 aa19.47■□□□□ 0.71
PCCB-201ENST00000251654 GJA10Q969M2 543 aa19.47■□□□□ 0.71
PCCB-201ENST00000251654 DCPSQ96C86 337 aaKnown RBP19.47■□□□□ 0.71
PCCB-201ENST00000251654 RAB34Q9BZG1 259 aa19.47■□□□□ 0.71
PCCB-201ENST00000251654 HSD3B7Q9H2F3 369 aa19.47■□□□□ 0.71
PCCB-201ENST00000251654 BLZF1Q9H2G9 400 aa19.47■□□□□ 0.71
PCCB-201ENST00000251654 CUEDC2Q9H467 287 aa19.47■□□□□ 0.71
PCCB-201ENST00000251654 CCPG1Q9ULG6 757 aa19.47■□□□□ 0.71
PCCB-201ENST00000251654 COL11A1P12107 1806 aaPredicted RBP19.46■□□□□ 0.71
PCCB-201ENST00000251654 FAM86B1E9PN63 330 aa19.46■□□□□ 0.71
PCCB-201ENST00000251654 GCOM1H8Y6P7 765 aaPredicted RBP19.46■□□□□ 0.71
PCCB-201ENST00000251654 CYP3A4P08684 503 aa19.46■□□□□ 0.71
PCCB-201ENST00000251654 FAM86B2P0C5J1 330 aa19.46■□□□□ 0.71
PCCB-201ENST00000251654 POLR2MP0CAP2 368 aa19.46■□□□□ 0.71
PCCB-201ENST00000251654 Q4G0T1 1027 aa19.46■□□□□ 0.71
PCCB-201ENST00000251654 ETNPPLQ8TBG4 499 aa19.46■□□□□ 0.71
PCCB-201ENST00000251654 PLIN2Q99541 437 aa19.46■□□□□ 0.71
PCCB-201ENST00000251654 ZNF75DP51815 510 aa19.46■□□□□ 0.71
PCCB-201ENST00000251654 HMGCS2P54868 508 aa19.46■□□□□ 0.71
PCCB-201ENST00000251654 MYL5Q02045 173 aa19.46■□□□□ 0.71
PCCB-201ENST00000251654 DPY19L2Q6NUT2 758 aa19.46■□□□□ 0.71
PCCB-201ENST00000251654 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.46■□□□□ 0.71
PCCB-201ENST00000251654 FCHSD1Q86WN1 690 aa19.46■□□□□ 0.71
PCCB-201ENST00000251654 TRIM5Q9C035 493 aa19.46■□□□□ 0.71
PCCB-201ENST00000251654 PCDHA12Q9UN75 941 aa19.46■□□□□ 0.71
PCCB-201ENST00000251654 GRB10Q13322 594 aa19.45■□□□□ 0.7
PCCB-201ENST00000251654 PRKG1Q13976 671 aa19.45■□□□□ 0.7
PCCB-201ENST00000251654 MAGEF1Q9HAY2 307 aa19.45■□□□□ 0.7
PCCB-201ENST00000251654 SNCAIPQ9Y6H5 919 aa19.45■□□□□ 0.7
PCCB-201ENST00000251654 ZC3H4Q9UPT8 1303 aaKnown RBP19.45■□□□□ 0.7
PCCB-201ENST00000251654 SCN4AP35499 1836 aa19.45■□□□□ 0.7
PCCB-201ENST00000251654 SMTNL1A8MU46 457 aa19.44■□□□□ 0.7
PCCB-201ENST00000251654 C19orf81C9J6K1 198 aa19.44■□□□□ 0.7
PCCB-201ENST00000251654 MYL1P05976 194 aa19.44■□□□□ 0.7
PCCB-201ENST00000251654 HSD17B4P51659 736 aa19.44■□□□□ 0.7
PCCB-201ENST00000251654 GHRHRQ02643 423 aa19.44■□□□□ 0.7
PCCB-201ENST00000251654 VGLL4Q14135 290 aa19.44■□□□□ 0.7
PCCB-201ENST00000251654 PRR16Q569H4 304 aa19.44■□□□□ 0.7
PCCB-201ENST00000251654 KRT26Q7Z3Y9 468 aa19.44■□□□□ 0.7
PCCB-201ENST00000251654 CLEC4DQ8WXI8 215 aa19.44■□□□□ 0.7
PCCB-201ENST00000251654 PNMA5Q96PV4 448 aa19.44■□□□□ 0.7
PCCB-201ENST00000251654 DACH1Q9UI36 760 aa19.44■□□□□ 0.7
PCCB-201ENST00000251654 AFG3L2Q9Y4W6 797 aa19.44■□□□□ 0.7
PCCB-201ENST00000251654 IGLV3-22A0A075B6J6 115 aa19.44■□□□□ 0.7
PCCB-201ENST00000251654 TBX3O15119 743 aa19.44■□□□□ 0.7
PCCB-201ENST00000251654 FMR1Q06787 632 aaKnown RBP eCLIP19.44■□□□□ 0.74e-13■■■■■ 26.9
PCCB-201ENST00000251654 USP50Q70EL3 339 aaPredicted RBP19.44■□□□□ 0.7
PCCB-201ENST00000251654 CALML4Q96GE6 196 aa19.44■□□□□ 0.7
PCCB-201ENST00000251654 MED15Q96RN5 788 aa19.44■□□□□ 0.7
PCCB-201ENST00000251654 NUDT12Q9BQG2 462 aa19.44■□□□□ 0.7
PCCB-201ENST00000251654 VWA5AO00534 786 aa19.43■□□□□ 0.7
PCCB-201ENST00000251654 NFIBO00712 420 aa19.43■□□□□ 0.7
PCCB-201ENST00000251654 SPIRE1Q08AE8 756 aa19.43■□□□□ 0.7
PCCB-201ENST00000251654 SLFN12Q8IYM2 578 aa19.43■□□□□ 0.7
PCCB-201ENST00000251654 CPXCR1Q8N123 301 aa19.43■□□□□ 0.7
PCCB-201ENST00000251654 CYP2W1Q8TAV3 490 aa19.43■□□□□ 0.7
PCCB-201ENST00000251654 SNX29Q8TEQ0 813 aa19.43■□□□□ 0.7
PCCB-201ENST00000251654 WNK4Q96J92 1243 aa19.43■□□□□ 0.7
PCCB-201ENST00000251654 RAVER2Q9HCJ3 691 aaKnown RBP19.43■□□□□ 0.7
PCCB-201ENST00000251654 BLOC1S4Q9NUP1 217 aa19.43■□□□□ 0.7
PCCB-201ENST00000251654 MARCH6O60337 910 aa19.42■□□□□ 0.7
PCCB-201ENST00000251654 RPN1P04843 607 aaKnown RBP19.42■□□□□ 0.7
PCCB-201ENST00000251654 FDX1P10109 184 aa19.42■□□□□ 0.7
PCCB-201ENST00000251654 CD44P16070 742 aaKnown RBP19.42■□□□□ 0.7
PCCB-201ENST00000251654 EPHX2P34913 555 aa19.42■□□□□ 0.7
PCCB-201ENST00000251654 GPR162Q16538 588 aa19.42■□□□□ 0.7
PCCB-201ENST00000251654 KRT79Q5XKE5 535 aa19.42■□□□□ 0.7
PCCB-201ENST00000251654 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.42■□□□□ 0.7
PCCB-201ENST00000251654 ZC3H15Q8WU90 426 aaKnown RBP19.42■□□□□ 0.7
PCCB-201ENST00000251654 ATG4CQ96DT6 458 aa19.42■□□□□ 0.7
PCCB-201ENST00000251654 MRFAP1L1Q96HT8 127 aa19.42■□□□□ 0.7
PCCB-201ENST00000251654 STK17AQ9UEE5 414 aa19.42■□□□□ 0.7
PCCB-201ENST00000251654 GLTPD2A6NH11 291 aa19.41■□□□□ 0.7
PCCB-201ENST00000251654 ERCC5P28715 1186 aaPredicted RBP19.41■□□□□ 0.7
PCCB-201ENST00000251654 MAP3K9P80192 1104 aa19.41■□□□□ 0.7
PCCB-201ENST00000251654 TMEM119Q4V9L6 283 aa19.41■□□□□ 0.7
PCCB-201ENST00000251654 CT47A1Q5JQC4 288 aaPredicted RBP19.41■□□□□ 0.7
PCCB-201ENST00000251654 SMYD4Q8IYR2 804 aaPredicted RBP19.41■□□□□ 0.7
PCCB-201ENST00000251654 UIMC1Q96RL1 719 aa19.41■□□□□ 0.7
PCCB-201ENST00000251654 ADAMTS5Q9UNA0 930 aa19.41■□□□□ 0.7
PCCB-201ENST00000251654 KLRC4O43908 158 aa19.41■□□□□ 0.7
PCCB-201ENST00000251654 PPP1R12BO60237 982 aaPredicted RBP19.41■□□□□ 0.7
PCCB-201ENST00000251654 PTMAP06454 111 aaKnown RBP19.41■□□□□ 0.7
PCCB-201ENST00000251654 ALAS1P13196 640 aa19.41■□□□□ 0.7
PCCB-201ENST00000251654 CDC25BP30305 580 aa19.41■□□□□ 0.7
PCCB-201ENST00000251654 REPS2Q8NFH8 660 aa19.41■□□□□ 0.7
PCCB-201ENST00000251654 ENOX1Q8TC92 643 aaKnown RBP19.41■□□□□ 0.7
PCCB-201ENST00000251654 FAM20AQ96MK3 541 aa19.41■□□□□ 0.7
PCCB-201ENST00000251654 TRIM9Q9C026 710 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms