RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 SLC37A4O43826 429 aa24.13■■□□□ 1.45
SH2D3A-201ENST00000245908 TUBBP07437 444 aa24.13■■□□□ 1.45
SH2D3A-201ENST00000245908 EHBP1Q8NDI1 1231 aa24.13■■□□□ 1.45
SH2D3A-201ENST00000245908 EIF3CQ99613 913 aaKnown RBP24.13■■□□□ 1.45
SH2D3A-201ENST00000245908 NHEJ1Q9H9Q4 299 aaPredicted RBP24.13■■□□□ 1.45
SH2D3A-201ENST00000245908 ZKSCAN7Q9P0L1 754 aaPredicted RBP24.13■■□□□ 1.45
SH2D3A-201ENST00000245908 C10orf71Q711Q0 1435 aa24.12■■□□□ 1.45
SH2D3A-201ENST00000245908 FKBP15Q5T1M5 1219 aa24.12■■□□□ 1.45
SH2D3A-201ENST00000245908 PPP1R18Q6NYC8 613 aa24.12■■□□□ 1.45
SH2D3A-201ENST00000245908 KIAA1328Q86T90 577 aa24.12■■□□□ 1.45
SH2D3A-201ENST00000245908 MSL3Q8N5Y2 521 aaKnown RBP24.12■■□□□ 1.45
SH2D3A-201ENST00000245908 LARP4BQ92615 738 aaKnown RBP24.12■■□□□ 1.45
SH2D3A-201ENST00000245908 HPS3Q969F9 1004 aa24.12■■□□□ 1.45
SH2D3A-201ENST00000245908 JAKMIP2Q96AA8 810 aa24.12■■□□□ 1.45
SH2D3A-201ENST00000245908 SLC39A2Q9NP94 309 aa24.12■■□□□ 1.45
SH2D3A-201ENST00000245908 QSER1Q2KHR3 1735 aa24.12■■□□□ 1.45
SH2D3A-201ENST00000245908 KRT86O43790 486 aa24.12■■□□□ 1.45
SH2D3A-201ENST00000245908 TDP2O95551 362 aa24.12■■□□□ 1.45
SH2D3A-201ENST00000245908 RHOXF2BP0C7M4 288 aa24.12■■□□□ 1.45
SH2D3A-201ENST00000245908 PDIA5Q14554 519 aa24.12■■□□□ 1.45
SH2D3A-201ENST00000245908 MCM6Q14566 821 aa24.12■■□□□ 1.45
SH2D3A-201ENST00000245908 NCAPH2Q6IBW4 605 aa24.12■■□□□ 1.45
SH2D3A-201ENST00000245908 LRRC47Q8N1G4 583 aaKnown RBP24.12■■□□□ 1.45
SH2D3A-201ENST00000245908 CRAMP1Q96RY5 1269 aa24.12■■□□□ 1.45
SH2D3A-201ENST00000245908 RHOXF2Q9BQY4 288 aa24.12■■□□□ 1.45
SH2D3A-201ENST00000245908 RAB34Q9BZG1 259 aa24.12■■□□□ 1.45
SH2D3A-201ENST00000245908 AKR1B1P15121 316 aa24.11■■□□□ 1.45
SH2D3A-201ENST00000245908 HOXA7P31268 230 aaPredicted RBP24.11■■□□□ 1.45
SH2D3A-201ENST00000245908 PAPD7Q5XG87 772 aaKnown RBP24.11■■□□□ 1.45
SH2D3A-201ENST00000245908 HNRNPH2P55795 449 aaKnown RBP24.1■■□□□ 1.45
SH2D3A-201ENST00000245908 HDXQ7Z353 690 aa24.1■■□□□ 1.45
SH2D3A-201ENST00000245908 NOA1Q8NC60 698 aaKnown RBP24.1■■□□□ 1.45
SH2D3A-201ENST00000245908 CDK5RAP3Q96JB5 506 aa24.1■■□□□ 1.45
SH2D3A-201ENST00000245908 PCMTD1Q96MG8 357 aaPredicted RBP24.1■■□□□ 1.45
SH2D3A-201ENST00000245908 L1RE1Q9UN81 338 aa24.1■■□□□ 1.45
SH2D3A-201ENST00000245908 ABCB11O95342 1321 aa24.1■■□□□ 1.45
SH2D3A-201ENST00000245908 C6orf229H3BNL8 230 aa24.1■■□□□ 1.45
SH2D3A-201ENST00000245908 VSNL1P62760 191 aa24.1■■□□□ 1.45
SH2D3A-201ENST00000245908 PICALMQ13492 652 aa24.1■■□□□ 1.45
SH2D3A-201ENST00000245908 GUF1Q8N442 669 aaKnown RBP24.1■■□□□ 1.45
SH2D3A-201ENST00000245908 RAD54LQ92698 747 aa24.1■■□□□ 1.45
SH2D3A-201ENST00000245908 GBP3Q9H0R5 595 aa24.1■■□□□ 1.45
SH2D3A-201ENST00000245908 ABCB6Q9NP58 842 aa24.1■■□□□ 1.45
SH2D3A-201ENST00000245908 TFR2Q9UP52 801 aa24.1■■□□□ 1.45
SH2D3A-201ENST00000245908 NKRFO15226 690 aaKnown RBP eCLIP24.09■■□□□ 1.45
SH2D3A-201ENST00000245908 IPO7O95373 1038 aaKnown RBP24.09■■□□□ 1.45
SH2D3A-201ENST00000245908 ATP1A1P05023 1023 aaKnown RBP24.09■■□□□ 1.45
SH2D3A-201ENST00000245908 GTF2IP78347 998 aa24.09■■□□□ 1.45
SH2D3A-201ENST00000245908 DPP8Q6V1X1 898 aaPredicted RBP24.09■■□□□ 1.45
SH2D3A-201ENST00000245908 RIC8AQ9NPQ8 531 aa24.09■■□□□ 1.45
SH2D3A-201ENST00000245908 SUGT1Q9Y2Z0 365 aa24.09■■□□□ 1.45
SH2D3A-201ENST00000245908 SAR1BQ9Y6B6 198 aa24.09■■□□□ 1.45
SH2D3A-201ENST00000245908 RCCD1A6NED2 376 aa24.09■■□□□ 1.45
SH2D3A-201ENST00000245908 TMEM119Q4V9L6 283 aa24.09■■□□□ 1.45
SH2D3A-201ENST00000245908 PURBQ96QR8 312 aaKnown RBP24.09■■□□□ 1.45
SH2D3A-201ENST00000245908 ZCCHC17Q9NP64 241 aaKnown RBP24.09■■□□□ 1.45
SH2D3A-201ENST00000245908 MYO3BQ8WXR4 1341 aa24.08■■□□□ 1.45
SH2D3A-201ENST00000245908 PNMA6FA0A0J9YX94 578 aa24.08■■□□□ 1.45
SH2D3A-201ENST00000245908 ENC1O14682 589 aa24.08■■□□□ 1.45
SH2D3A-201ENST00000245908 HNRNPH3P31942 346 aaKnown RBP24.08■■□□□ 1.45
SH2D3A-201ENST00000245908 ZNF543Q08ER8 600 aa24.08■■□□□ 1.45
SH2D3A-201ENST00000245908 VWA3BQ502W6 1294 aa24.08■■□□□ 1.45
SH2D3A-201ENST00000245908 WDR93Q6P2C0 686 aa24.08■■□□□ 1.45
SH2D3A-201ENST00000245908 LACRTQ9GZZ8 138 aa24.08■■□□□ 1.45
SH2D3A-201ENST00000245908 JMJD4Q9H9V9 463 aa24.08■■□□□ 1.45
SH2D3A-201ENST00000245908 GPCPD1Q9NPB8 672 aa24.08■■□□□ 1.45
SH2D3A-201ENST00000245908 HDAC6Q9UBN7 1215 aa24.08■■□□□ 1.45
SH2D3A-201ENST00000245908 SIK3Q9Y2K2 1263 aa24.08■■□□□ 1.45
SH2D3A-201ENST00000245908 POTEMA6NI47 508 aa24.08■■□□□ 1.44
SH2D3A-201ENST00000245908 FGFR1OPO95684 399 aaKnown RBP24.08■■□□□ 1.44
SH2D3A-201ENST00000245908 TTLL1O95922 423 aa24.08■■□□□ 1.44
SH2D3A-201ENST00000245908 PPP4R3AQ6IN85 833 aa24.08■■□□□ 1.44
SH2D3A-201ENST00000245908 SNX29Q8TEQ0 813 aa24.08■■□□□ 1.44
SH2D3A-201ENST00000245908 LRRC27Q9C0I9 530 aa24.08■■□□□ 1.44
SH2D3A-201ENST00000245908 DDX4Q9NQI0 724 aaKnown RBP24.08■■□□□ 1.44
SH2D3A-201ENST00000245908 H3BQF6 201 aa24.07■■□□□ 1.44
SH2D3A-201ENST00000245908 CLK2P49760 499 aaKnown RBP24.07■■□□□ 1.44
SH2D3A-201ENST00000245908 LRRC63Q05C16 580 aa24.07■■□□□ 1.44
SH2D3A-201ENST00000245908 EHHADHQ08426 723 aa24.07■■□□□ 1.44
SH2D3A-201ENST00000245908 KRT79Q5XKE5 535 aa24.07■■□□□ 1.44
SH2D3A-201ENST00000245908 DYMQ7RTS9 669 aa24.07■■□□□ 1.44
SH2D3A-201ENST00000245908 TMC4Q7Z404 712 aa24.07■■□□□ 1.44
SH2D3A-201ENST00000245908 SWAP70Q9UH65 585 aa24.07■■□□□ 1.44
SH2D3A-201ENST00000245908 GREB1LQ9C091 1923 aaPredicted RBP24.07■■□□□ 1.44
SH2D3A-201ENST00000245908 KLRG2A4D1S0 409 aaPredicted RBP24.07■■□□□ 1.44
SH2D3A-201ENST00000245908 EIF6P56537 245 aaKnown RBP24.07■■□□□ 1.44
SH2D3A-201ENST00000245908 MAN2A1Q16706 1144 aa24.07■■□□□ 1.44
SH2D3A-201ENST00000245908 FOXR2Q6PJQ5 311 aa24.07■■□□□ 1.44
SH2D3A-201ENST00000245908 CLEC10AQ8IUN9 316 aa24.07■■□□□ 1.44
SH2D3A-201ENST00000245908 ADGRF4Q8IZF3 695 aa24.07■■□□□ 1.44
SH2D3A-201ENST00000245908 NUDT12Q9BQG2 462 aa24.07■■□□□ 1.44
SH2D3A-201ENST00000245908 NDST4Q9H3R1 872 aa24.07■■□□□ 1.44
SH2D3A-201ENST00000245908 PLAGL2Q9UPG8 496 aa24.07■■□□□ 1.44
SH2D3A-201ENST00000245908 ANO9A1A5B4 782 aa24.06■■□□□ 1.44
SH2D3A-201ENST00000245908 TNNI2P48788 182 aa24.06■■□□□ 1.44
SH2D3A-201ENST00000245908 VAV2P52735 878 aa24.06■■□□□ 1.44
SH2D3A-201ENST00000245908 PSMD2Q13200 908 aa24.06■■□□□ 1.44
SH2D3A-201ENST00000245908 COA1Q9GZY4 146 aa24.06■■□□□ 1.44
SH2D3A-201ENST00000245908 PPP1R11O60927 126 aaPredicted RBP24.05■■□□□ 1.44
SH2D3A-201ENST00000245908 DDR1Q08345 913 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms