RNA–Protein interactions for RNA: ENST00000243563.7

SNRPA-201, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-201ENST00000243563 INF2Q27J81 1249 aa23.03■■□□□ 1.28
SNRPA-201ENST00000243563 CRYGNQ8WXF5 182 aa23.03■■□□□ 1.28
SNRPA-201ENST00000243563 GLT8D2Q9H1C3 349 aa23.03■■□□□ 1.28
SNRPA-201ENST00000243563 AP3B2Q13367 1082 aa23.02■■□□□ 1.28
SNRPA-201ENST00000243563 GNL2Q13823 731 aaKnown RBP23.02■■□□□ 1.28
SNRPA-201ENST00000243563 KRT25Q7Z3Z0 450 aa23.02■■□□□ 1.28
SNRPA-201ENST00000243563 JMYQ8N9B5 988 aa23.02■■□□□ 1.28
SNRPA-201ENST00000243563 TBCKQ8TEA7 893 aa23.02■■□□□ 1.28
SNRPA-201ENST00000243563 ZNF296Q8WUU4 475 aaPredicted RBP23.02■■□□□ 1.28
SNRPA-201ENST00000243563 GJD2Q9UKL4 321 aa23.02■■□□□ 1.28
SNRPA-201ENST00000243563 FRMPD4Q14CM0 1322 aa23.02■■□□□ 1.28
SNRPA-201ENST00000243563 CCDC194A0A1B0GVG4 234 aa23.01■■□□□ 1.27
SNRPA-201ENST00000243563 POTEB2H3BUK9 544 aa23.01■■□□□ 1.27
SNRPA-201ENST00000243563 TNPO2O14787 897 aaKnown RBP23.01■■□□□ 1.27
SNRPA-201ENST00000243563 EIF2AK2P19525 551 aaKnown RBP23.01■■□□□ 1.27
SNRPA-201ENST00000243563 NUCB2P80303 420 aa23.01■■□□□ 1.27
SNRPA-201ENST00000243563 NPLOC4Q8TAT6 608 aa23.01■■□□□ 1.27
SNRPA-201ENST00000243563 USP6NLQ92738 828 aa23.01■■□□□ 1.27
SNRPA-201ENST00000243563 FTOQ9C0B1 505 aaKnown RBP eCLIP23.01■■□□□ 1.27
SNRPA-201ENST00000243563 PXMP2Q9NR77 195 aa23.01■■□□□ 1.27
SNRPA-201ENST00000243563 MAP3K20Q9NYL2 800 aaKnown RBP23.01■■□□□ 1.27
SNRPA-201ENST00000243563 GABRQQ9UN88 632 aa23.01■■□□□ 1.27
SNRPA-201ENST00000243563 IVNS1ABPQ9Y6Y0 642 aa23.01■■□□□ 1.27
SNRPA-201ENST00000243563 CASP8AP2Q9UKL3 1982 aa23.01■■□□□ 1.27
SNRPA-201ENST00000243563 KIAA1217Q5T5P2 1943 aa23.01■■□□□ 1.27
SNRPA-201ENST00000243563 SLC15A5A6NIM6 579 aa23■■□□□ 1.27
SNRPA-201ENST00000243563 SPDYE3A6NKU9 549 aa23■■□□□ 1.27
SNRPA-201ENST00000243563 NONOQ15233 471 aaKnown RBP eCLIP23■■□□□ 1.27
SNRPA-201ENST00000243563 ZNF792Q3KQV3 632 aa23■■□□□ 1.27
SNRPA-201ENST00000243563 ABRAQ8N0Z2 381 aa23■■□□□ 1.27
SNRPA-201ENST00000243563 SAMD3Q8N6K7 520 aa23■■□□□ 1.27
SNRPA-201ENST00000243563 RMDN3Q96TC7 470 aa23■■□□□ 1.27
SNRPA-201ENST00000243563 STRNO43815 780 aa23■■□□□ 1.27
SNRPA-201ENST00000243563 SREBF1P36956 1147 aa23■■□□□ 1.27
SNRPA-201ENST00000243563 MYSM1Q5VVJ2 828 aa23■■□□□ 1.27
SNRPA-201ENST00000243563 FOSP01100 380 aaPredicted RBP22.99■■□□□ 1.27
SNRPA-201ENST00000243563 ATP2B1P20020 1258 aa22.99■■□□□ 1.27
SNRPA-201ENST00000243563 ALDH5A1P51649 535 aaPredicted RBP22.99■■□□□ 1.27
SNRPA-201ENST00000243563 FCGRTP55899 365 aa22.99■■□□□ 1.27
SNRPA-201ENST00000243563 PGM5Q15124 567 aa22.99■■□□□ 1.27
SNRPA-201ENST00000243563 BRAPQ7Z569 592 aa22.99■■□□□ 1.27
SNRPA-201ENST00000243563 PDCD2LQ9BRP1 358 aa22.99■■□□□ 1.27
SNRPA-201ENST00000243563 BEGAINQ9BUH8 593 aa22.99■■□□□ 1.27
SNRPA-201ENST00000243563 ARHGAP4P98171 946 aa22.98■■□□□ 1.27
SNRPA-201ENST00000243563 TEX2Q8IWB9 1127 aa22.98■■□□□ 1.27
SNRPA-201ENST00000243563 MAF1Q9H063 256 aa22.98■■□□□ 1.27
SNRPA-201ENST00000243563 ZSCAN16Q9H4T2 348 aaPredicted RBP22.98■■□□□ 1.27
SNRPA-201ENST00000243563 DOCK5Q9H7D0 1870 aa22.97■■□□□ 1.27
SNRPA-201ENST00000243563 FKTNO75072 461 aa22.97■■□□□ 1.27
SNRPA-201ENST00000243563 MRPS9P82933 396 aaKnown RBP22.97■■□□□ 1.27
SNRPA-201ENST00000243563 MAP2K5Q13163 448 aa22.97■■□□□ 1.27
SNRPA-201ENST00000243563 ARHGEF16Q5VV41 709 aa22.97■■□□□ 1.27
SNRPA-201ENST00000243563 FLRT1Q9NZU1 646 aa22.97■■□□□ 1.27
SNRPA-201ENST00000243563 TDP2O95551 362 aa22.97■■□□□ 1.27
SNRPA-201ENST00000243563 PDIA4P13667 645 aaKnown RBP22.97■■□□□ 1.27
SNRPA-201ENST00000243563 PRKCZQ05513 592 aa22.97■■□□□ 1.27
SNRPA-201ENST00000243563 CCL14Q16627 93 aa22.97■■□□□ 1.27
SNRPA-201ENST00000243563 CYP2W1Q8TAV3 490 aa22.97■■□□□ 1.27
SNRPA-201ENST00000243563 PCDHB6Q9Y5E3 794 aa22.97■■□□□ 1.27
SNRPA-201ENST00000243563 FOXN1O15353 648 aa22.96■■□□□ 1.27
SNRPA-201ENST00000243563 CYP2B6P20813 491 aa22.96■■□□□ 1.27
SNRPA-201ENST00000243563 DNM1Q05193 864 aaKnown RBP22.96■■□□□ 1.27
SNRPA-201ENST00000243563 LETM2Q2VYF4 491 aa22.96■■□□□ 1.27
SNRPA-201ENST00000243563 NEK8Q86SG6 692 aa22.96■■□□□ 1.27
SNRPA-201ENST00000243563 DPP9Q86TI2 863 aa22.96■■□□□ 1.27
SNRPA-201ENST00000243563 NSUN6Q8TEA1 469 aaKnown RBP22.96■■□□□ 1.27
SNRPA-201ENST00000243563 TNPO1Q92973 898 aaKnown RBP22.96■■□□□ 1.27
SNRPA-201ENST00000243563 MYCLP12524 364 aaPredicted RBP22.95■■□□□ 1.26
SNRPA-201ENST00000243563 EDNRBP24530 442 aa22.95■■□□□ 1.26
SNRPA-201ENST00000243563 DNERQ8NFT8 737 aa22.95■■□□□ 1.26
SNRPA-201ENST00000243563 MAML3Q96JK9 1138 aa22.95■■□□□ 1.26
SNRPA-201ENST00000243563 USP28Q96RU2 1077 aa22.95■■□□□ 1.26
SNRPA-201ENST00000243563 NUDT12Q9BQG2 462 aa22.95■■□□□ 1.26
SNRPA-201ENST00000243563 MRVI1Q9Y6F6 885 aa22.95■■□□□ 1.26
SNRPA-201ENST00000243563 FAM86B1E9PN63 330 aa22.94■■□□□ 1.26
SNRPA-201ENST00000243563 SLC37A4O43826 429 aa22.94■■□□□ 1.26
SNRPA-201ENST00000243563 NR3C2P08235 984 aa22.94■■□□□ 1.26
SNRPA-201ENST00000243563 FAM86B2P0C5J1 330 aa22.94■■□□□ 1.26
SNRPA-201ENST00000243563 FLT3LGP49771 235 aa22.94■■□□□ 1.26
SNRPA-201ENST00000243563 MCTP2Q6DN12 878 aa22.94■■□□□ 1.26
SNRPA-201ENST00000243563 TFIP11Q9UBB9 837 aaKnown RBP22.94■■□□□ 1.26
SNRPA-201ENST00000243563 CLIC4Q9Y696 253 aa22.94■■□□□ 1.26
SNRPA-201ENST00000243563 RGS20O76081 388 aa22.93■■□□□ 1.26
SNRPA-201ENST00000243563 CYP3A4P08684 503 aa22.93■■□□□ 1.26
SNRPA-201ENST00000243563 HOXC6P09630 235 aa22.93■■□□□ 1.26
SNRPA-201ENST00000243563 HSPA8P11142 646 aaKnown RBP22.93■■□□□ 1.26
SNRPA-201ENST00000243563 KIF22Q14807 665 aa22.93■■□□□ 1.26
SNRPA-201ENST00000243563 ZNF174Q15697 407 aa22.93■■□□□ 1.26
SNRPA-201ENST00000243563 TTC38Q5R3I4 469 aa22.93■■□□□ 1.26
SNRPA-201ENST00000243563 PCNX4Q63HM2 1172 aa22.93■■□□□ 1.26
SNRPA-201ENST00000243563 LENG9Q96B70 501 aa22.93■■□□□ 1.26
SNRPA-201ENST00000243563 UIMC1Q96RL1 719 aa22.93■■□□□ 1.26
SNRPA-201ENST00000243563 RTEL1Q9NZ71 1219 aa22.93■■□□□ 1.26
SNRPA-201ENST00000243563 HTTP42858 3142 aa22.93■■□□□ 1.26
SNRPA-201ENST00000243563 IGLV3-22A0A075B6J6 115 aa22.93■■□□□ 1.26
SNRPA-201ENST00000243563 HSPA1AP0DMV8 641 aaKnown RBP22.93■■□□□ 1.26
SNRPA-201ENST00000243563 HSPA1BP0DMV9 641 aaKnown RBP22.93■■□□□ 1.26
SNRPA-201ENST00000243563 CEBPZQ03701 1054 aaKnown RBP22.93■■□□□ 1.26
SNRPA-201ENST00000243563 VSIG10LQ86VR7 867 aa22.93■■□□□ 1.26
SNRPA-201ENST00000243563 SOCS4Q8WXH5 440 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms