RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 PORCNQ9H237 461 aa15.02■□□□□ -0
SLIRP-201ENST00000238688 PAK6Q9NQU5 681 aaPredicted RBP15.02■□□□□ -0
SLIRP-201ENST00000238688 FAM13BQ9NYF5 915 aa15.02■□□□□ -0
SLIRP-201ENST00000238688 BIN2Q9UBW5 565 aaPredicted RBP15.02■□□□□ -0
SLIRP-201ENST00000238688 A0A0G2JMZ2 1700 aa15.01□□□□□ -0.01
SLIRP-201ENST00000238688 USP17L15C9J2P7 530 aa15.01□□□□□ -0.01
SLIRP-201ENST00000238688 USP17L13C9JLJ4 530 aa15.01□□□□□ -0.01
SLIRP-201ENST00000238688 USP17L11C9JVI0 530 aa15.01□□□□□ -0.01
SLIRP-201ENST00000238688 USP17L18D6R9N7 530 aa15.01□□□□□ -0.01
SLIRP-201ENST00000238688 USP17L22D6RA61 530 aa15.01□□□□□ -0.01
SLIRP-201ENST00000238688 USP17L17D6RBQ6 530 aa15.01□□□□□ -0.01
SLIRP-201ENST00000238688 USP17L19D6RCP7 530 aa15.01□□□□□ -0.01
SLIRP-201ENST00000238688 USP17L20D6RJB6 530 aa15.01□□□□□ -0.01
SLIRP-201ENST00000238688 F5H6K3 240 aa15.01□□□□□ -0.01
SLIRP-201ENST00000238688 SGPL1O95470 568 aa15.01□□□□□ -0.01
SLIRP-201ENST00000238688 PRPHP41219 470 aa15.01□□□□□ -0.01
SLIRP-201ENST00000238688 MRPL12P52815 198 aaKnown RBP15.01□□□□□ -0.01
SLIRP-201ENST00000238688 ERVK-9P63128 1117 aa15.01□□□□□ -0.01
SLIRP-201ENST00000238688 ERVK-24P63145 666 aa15.01□□□□□ -0.01
SLIRP-201ENST00000238688 KLRC3Q07444 240 aa15.01□□□□□ -0.01
SLIRP-201ENST00000238688 USP17L24Q0WX57 530 aa15.01□□□□□ -0.01
SLIRP-201ENST00000238688 SNW1Q13573 536 aaKnown RBP15.01□□□□□ -0.01
SLIRP-201ENST00000238688 SLC35G1Q2M3R5 365 aa15.01□□□□□ -0.01
SLIRP-201ENST00000238688 KANK3Q6NY19 840 aa15.01□□□□□ -0.01
SLIRP-201ENST00000238688 FAM160B2Q86V87 743 aa15.01□□□□□ -0.01
SLIRP-201ENST00000238688 REXO1Q8N1G1 1221 aaKnown RBP15.01□□□□□ -0.01
SLIRP-201ENST00000238688 GPRC5AQ8NFJ5 357 aa15.01□□□□□ -0.01
SLIRP-201ENST00000238688 U2AF1L4Q8WU68 220 aaKnown RBP15.01□□□□□ -0.01
SLIRP-201ENST00000238688 CHURC1Q8WUH1 139 aa15.01□□□□□ -0.01
SLIRP-201ENST00000238688 USP6NLQ92738 828 aa15.01□□□□□ -0.01
SLIRP-201ENST00000238688 HPSEQ9Y251 543 aa15.01□□□□□ -0.01
SLIRP-201ENST00000238688 COL11A1P12107 1806 aaPredicted RBP15.01□□□□□ -0.01
SLIRP-201ENST00000238688 TRIOBPQ9H2D6 2365 aa15□□□□□ -0.01
SLIRP-201ENST00000238688 NR1I2O75469 434 aa15□□□□□ -0.01
SLIRP-201ENST00000238688 FDX1P10109 184 aa15□□□□□ -0.01
SLIRP-201ENST00000238688 BMP3P12645 472 aa15□□□□□ -0.01
SLIRP-201ENST00000238688 ADCY7P51828 1080 aa15□□□□□ -0.01
SLIRP-201ENST00000238688 USP14P54578 494 aa15□□□□□ -0.01
SLIRP-201ENST00000238688 ATP2C1P98194 919 aaPredicted RBP15□□□□□ -0.01
SLIRP-201ENST00000238688 NONOQ15233 471 aaKnown RBP eCLIP15□□□□□ -0.01
SLIRP-201ENST00000238688 LBX2Q6XYB7 198 aa15□□□□□ -0.01
SLIRP-201ENST00000238688 CLEC10AQ8IUN9 316 aa15□□□□□ -0.01
SLIRP-201ENST00000238688 ADGRF4Q8IZF3 695 aa15□□□□□ -0.01
SLIRP-201ENST00000238688 OXER1Q8TDS5 423 aa15□□□□□ -0.01
SLIRP-201ENST00000238688 TRIB2Q92519 343 aa15□□□□□ -0.01
SLIRP-201ENST00000238688 FEZ1Q99689 392 aa15□□□□□ -0.01
SLIRP-201ENST00000238688 FTOQ9C0B1 505 aaKnown RBP eCLIP15□□□□□ -0.01
SLIRP-201ENST00000238688 CRISPLD2Q9H0B8 497 aa15□□□□□ -0.01
SLIRP-201ENST00000238688 JMJD4Q9H9V9 463 aa15□□□□□ -0.01
SLIRP-201ENST00000238688 RIC8AQ9NPQ8 531 aa15□□□□□ -0.01
SLIRP-201ENST00000238688 SMCO2A6NFE2 343 aa14.99□□□□□ -0.01
SLIRP-201ENST00000238688 NDUFB10O96000 172 aa14.99□□□□□ -0.01
SLIRP-201ENST00000238688 GOLGA8HP0CJ92 632 aa14.99□□□□□ -0.01
SLIRP-201ENST00000238688 SYKP43405 635 aa14.99□□□□□ -0.01
SLIRP-201ENST00000238688 ATP2B2Q01814 1243 aa14.99□□□□□ -0.01
SLIRP-201ENST00000238688 MORN1Q5T089 497 aa14.99□□□□□ -0.01
SLIRP-201ENST00000238688 CUL5Q93034 780 aa14.99□□□□□ -0.01
SLIRP-201ENST00000238688 PIGSQ96S52 555 aa14.99□□□□□ -0.01
SLIRP-201ENST00000238688 PAGR1Q9BTK6 254 aa14.99□□□□□ -0.01
SLIRP-201ENST00000238688 FUCA2Q9BTY2 467 aa14.99□□□□□ -0.01
SLIRP-201ENST00000238688 MAF1Q9H063 256 aa14.99□□□□□ -0.01
SLIRP-201ENST00000238688 VCPKMTQ9H867 229 aa14.99□□□□□ -0.01
SLIRP-201ENST00000238688 BTBD7Q9P203 1132 aa14.99□□□□□ -0.01
SLIRP-201ENST00000238688 FBXO2Q9UK22 296 aaPredicted RBP14.99□□□□□ -0.01
SLIRP-201ENST00000238688 RABGAP1Q9Y3P9 1069 aa14.99□□□□□ -0.01
SLIRP-201ENST00000238688 FRMPD3Q5JV73 1810 aa14.99□□□□□ -0.01
SLIRP-201ENST00000238688 hCG_1642624A0A1W2PR95 340 aa14.98□□□□□ -0.01
SLIRP-201ENST00000238688 SPDYE16A6NNV3 312 aaPredicted RBP14.98□□□□□ -0.01
SLIRP-201ENST00000238688 HMGCRP04035 888 aa14.98□□□□□ -0.01
SLIRP-201ENST00000238688 GCFC2P16383 781 aaKnown RBP14.98□□□□□ -0.01
SLIRP-201ENST00000238688 CYP2B6P20813 491 aa14.98□□□□□ -0.01
SLIRP-201ENST00000238688 LONP1P36776 959 aaKnown RBP14.98□□□□□ -0.01
SLIRP-201ENST00000238688 STAT2P52630 851 aa14.98□□□□□ -0.01
SLIRP-201ENST00000238688 SEMA3FQ13275 785 aa14.98□□□□□ -0.01
SLIRP-201ENST00000238688 AP3B2Q13367 1082 aa14.98□□□□□ -0.01
SLIRP-201ENST00000238688 MAP3K21Q5TCX8 1036 aa14.98□□□□□ -0.01
SLIRP-201ENST00000238688 SYDE2Q5VT97 1194 aa14.98□□□□□ -0.01
SLIRP-201ENST00000238688 SASS6Q6UVJ0 657 aa14.98□□□□□ -0.01
SLIRP-201ENST00000238688 PIK3AP1Q6ZUJ8 805 aa14.98□□□□□ -0.01
SLIRP-201ENST00000238688 GPR142Q7Z601 462 aa14.98□□□□□ -0.01
SLIRP-201ENST00000238688 GAS2L3Q86XJ1 694 aa14.98□□□□□ -0.01
SLIRP-201ENST00000238688 SAMD3Q8N6K7 520 aa14.98□□□□□ -0.01
SLIRP-201ENST00000238688 GTF3C2Q8WUA4 911 aaPredicted RBP14.98□□□□□ -0.01
SLIRP-201ENST00000238688 GPKOWQ92917 476 aaPredicted RBP eCLIP14.98□□□□□ -0.01
SLIRP-201ENST00000238688 AK8Q96MA6 479 aa14.98□□□□□ -0.01
SLIRP-201ENST00000238688 DEFB118Q96PH6 123 aa14.98□□□□□ -0.01
SLIRP-201ENST00000238688 AMNQ9BXJ7 453 aa14.98□□□□□ -0.01
SLIRP-201ENST00000238688 RPAP3Q9H6T3 665 aaPredicted RBP14.98□□□□□ -0.01
SLIRP-201ENST00000238688 PCDHA6Q9UN73 950 aa14.98□□□□□ -0.01
SLIRP-201ENST00000238688 PCDHB6Q9Y5E3 794 aa14.98□□□□□ -0.01
SLIRP-201ENST00000238688 PCDHA8Q9Y5H6 950 aa14.98□□□□□ -0.01
SLIRP-201ENST00000238688 FRMPD2Q68DX3 1309 aaPredicted RBP14.97□□□□□ -0.01
SLIRP-201ENST00000238688 SLC26A4O43511 780 aa14.97□□□□□ -0.01
SLIRP-201ENST00000238688 ZNF202O95125 648 aa14.97□□□□□ -0.01
SLIRP-201ENST00000238688 FOSP01100 380 aaPredicted RBP14.97□□□□□ -0.01
SLIRP-201ENST00000238688 XRCC5P13010 732 aaKnown RBP14.97□□□□□ -0.01
SLIRP-201ENST00000238688 PFKFB1P16118 471 aa14.97□□□□□ -0.01
SLIRP-201ENST00000238688 MAPK4P31152 587 aa14.97□□□□□ -0.01
SLIRP-201ENST00000238688 ZRSR1Q15695 479 aaKnown RBP14.97□□□□□ -0.01
SLIRP-201ENST00000238688 MOXD1Q6UVY6 613 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms