RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 CETN1Q12798 172 aa14.02□□□□□ -0.17
VAMP4-201ENST00000236192 ANKRD20A2Q5SQ80 823 aa14.02□□□□□ -0.17
VAMP4-201ENST00000236192 ANKRD20A1Q5TYW2 823 aa14.02□□□□□ -0.17
VAMP4-201ENST00000236192 PRMT1Q99873 361 aaKnown RBP14.02□□□□□ -0.17
VAMP4-201ENST00000236192 AMOTL2Q9Y2J4 779 aa14.02□□□□□ -0.17
VAMP4-201ENST00000236192 BZW2Q9Y6E2 419 aaKnown RBP14.02□□□□□ -0.17
VAMP4-201ENST00000236192 CCDC188H7C350 402 aa14.01□□□□□ -0.17
VAMP4-201ENST00000236192 CHL1O00533 1208 aa14.01□□□□□ -0.17
VAMP4-201ENST00000236192 ZNF185O15231 689 aa14.01□□□□□ -0.17
VAMP4-201ENST00000236192 KRT75O95678 551 aa14.01□□□□□ -0.17
VAMP4-201ENST00000236192 UBTFL6P0CB48 400 aaPredicted RBP14.01□□□□□ -0.17
VAMP4-201ENST00000236192 ESRRAP11474 423 aaPredicted RBP14.01□□□□□ -0.17
VAMP4-201ENST00000236192 SLCO1A2P46721 670 aa14.01□□□□□ -0.17
VAMP4-201ENST00000236192 RAPGEF5Q92565 580 aa14.01□□□□□ -0.17
VAMP4-201ENST00000236192 AZI2Q9H6S1 392 aa14.01□□□□□ -0.17
VAMP4-201ENST00000236192 TBC1D23Q9NUY8 699 aa14.01□□□□□ -0.17
VAMP4-201ENST00000236192 A0A1B0GTH6 734 aa14.01□□□□□ -0.17
VAMP4-201ENST00000236192 TEX33O43247 280 aa14.01□□□□□ -0.17
VAMP4-201ENST00000236192 GTPBP6O43824 516 aaPredicted RBP14.01□□□□□ -0.17
VAMP4-201ENST00000236192 MYL6BP14649 208 aa14.01□□□□□ -0.17
VAMP4-201ENST00000236192 VCAM1P19320 739 aa14.01□□□□□ -0.17
VAMP4-201ENST00000236192 PLTPP55058 493 aa14.01□□□□□ -0.17
VAMP4-201ENST00000236192 TOB2Q14106 344 aaPredicted RBP14.01□□□□□ -0.17
VAMP4-201ENST00000236192 TCP11X2Q5H9J9 407 aa14.01□□□□□ -0.17
VAMP4-201ENST00000236192 DTHD1Q6ZMT9 781 aa14.01□□□□□ -0.17
VAMP4-201ENST00000236192 EIF2AQ9BY44 585 aaKnown RBP14.01□□□□□ -0.17
VAMP4-201ENST00000236192 CNNM1Q9NRU3 951 aa14.01□□□□□ -0.17
VAMP4-201ENST00000236192 ANGEL1Q9UNK9 670 aaKnown RBP14.01□□□□□ -0.17
VAMP4-201ENST00000236192 ATP6V0A2Q9Y487 856 aa14.01□□□□□ -0.17
VAMP4-201ENST00000236192 KIF23Q02241 960 aaPredicted RBP14.01□□□□□ -0.17
VAMP4-201ENST00000236192 IRGCQ6NXR0 463 aa14.01□□□□□ -0.17
VAMP4-201ENST00000236192 NFRKBQ6P4R8 1299 aa14.01□□□□□ -0.17
VAMP4-201ENST00000236192 WDR60Q8WVS4 1066 aa14.01□□□□□ -0.17
VAMP4-201ENST00000236192 CYTH2Q99418 400 aa14.01□□□□□ -0.17
VAMP4-201ENST00000236192 GGT7Q9UJ14 662 aa14.01□□□□□ -0.17
VAMP4-201ENST00000236192 ZFP69BQ9UJL9 534 aa14.01□□□□□ -0.17
VAMP4-201ENST00000236192 ADGRL3Q9HAR2 1447 aa14.01□□□□□ -0.17
VAMP4-201ENST00000236192 ORC4O43929 436 aa14.01□□□□□ -0.17
VAMP4-201ENST00000236192 ADCY3O60266 1144 aa14.01□□□□□ -0.17
VAMP4-201ENST00000236192 GMNNO75496 209 aa14.01□□□□□ -0.17
VAMP4-201ENST00000236192 CACNA2D1P54289 1103 aa14.01□□□□□ -0.17
VAMP4-201ENST00000236192 NME9Q86XW9 330 aa14.01□□□□□ -0.17
VAMP4-201ENST00000236192 MB21D1Q8N884 522 aa14.01□□□□□ -0.17
VAMP4-201ENST00000236192 MAB21L3Q8N8X9 362 aa14.01□□□□□ -0.17
VAMP4-201ENST00000236192 ABCA10Q8WWZ4 1543 aa14.01□□□□□ -0.17
VAMP4-201ENST00000236192 THAP12O43422 761 aa14□□□□□ -0.17
VAMP4-201ENST00000236192 SESTD1Q86VW0 696 aa14□□□□□ -0.17
VAMP4-201ENST00000236192 PRPF31Q8WWY3 499 aaKnown RBP14□□□□□ -0.17
VAMP4-201ENST00000236192 TMEM87BQ96K49 555 aa14□□□□□ -0.17
VAMP4-201ENST00000236192 FBXL5Q9UKA1 691 aa14□□□□□ -0.17
VAMP4-201ENST00000236192 TRPA1O75762 1119 aa14□□□□□ -0.17
VAMP4-201ENST00000236192 IGHMBP2P38935 993 aaKnown RBP14□□□□□ -0.17
VAMP4-201ENST00000236192 MAP3K12Q12852 859 aa14□□□□□ -0.17
VAMP4-201ENST00000236192 KBTBD12Q3ZCT8 623 aa14□□□□□ -0.17
VAMP4-201ENST00000236192 DNAJC6O75061 913 aa14□□□□□ -0.17
VAMP4-201ENST00000236192 FTCDO95954 541 aa14□□□□□ -0.17
VAMP4-201ENST00000236192 PDE1BQ01064 536 aa14□□□□□ -0.17
VAMP4-201ENST00000236192 NR1I3Q14994 352 aa14□□□□□ -0.17
VAMP4-201ENST00000236192 PIGOQ8TEQ8 1089 aa14□□□□□ -0.17
VAMP4-201ENST00000236192 STAMQ92783 540 aa14□□□□□ -0.17
VAMP4-201ENST00000236192 RBM41Q96IZ5 413 aaKnown RBP14□□□□□ -0.17
VAMP4-201ENST00000236192 RILPQ96NA2 401 aa14□□□□□ -0.17
VAMP4-201ENST00000236192 MYD88Q99836 296 aa14□□□□□ -0.17
VAMP4-201ENST00000236192 TUBGCP2Q9BSJ2 902 aa14□□□□□ -0.17
VAMP4-201ENST00000236192 IQCA1LA6NCM1 817 aa14□□□□□ -0.17
VAMP4-201ENST00000236192 ATP6V1G1O75348 118 aa14□□□□□ -0.17
VAMP4-201ENST00000236192 PYGLP06737 847 aa14□□□□□ -0.17
VAMP4-201ENST00000236192 KIF11P52732 1056 aa14□□□□□ -0.17
VAMP4-201ENST00000236192 GRIK3Q13003 919 aa14□□□□□ -0.17
VAMP4-201ENST00000236192 ANKRD20A4Q4UJ75 823 aa14□□□□□ -0.17
VAMP4-201ENST00000236192 GPIHBP1Q8IV16 184 aa14□□□□□ -0.17
VAMP4-201ENST00000236192 ZCRB1Q8TBF4 217 aaKnown RBP14□□□□□ -0.17
VAMP4-201ENST00000236192 CAVIN3Q969G5 261 aa14□□□□□ -0.17
VAMP4-201ENST00000236192 TYW1Q9NV66 732 aaKnown RBP14□□□□□ -0.17
VAMP4-201ENST00000236192 SPDYE3A6NKU9 549 aa13.99□□□□□ -0.17
VAMP4-201ENST00000236192 HSPA9P38646 679 aaKnown RBP13.99□□□□□ -0.17
VAMP4-201ENST00000236192 CXorf38Q8TB03 319 aa13.99□□□□□ -0.17
VAMP4-201ENST00000236192 HAUS8Q9BT25 410 aa13.99□□□□□ -0.17
VAMP4-201ENST00000236192 ITIH6Q6UXX5 1313 aa13.99□□□□□ -0.17
VAMP4-201ENST00000236192 CCDC189A1A4V9 331 aa13.99□□□□□ -0.17
VAMP4-201ENST00000236192 HARSP12081 509 aaKnown RBP13.99□□□□□ -0.17
VAMP4-201ENST00000236192 MED21Q13503 144 aa13.99□□□□□ -0.17
VAMP4-201ENST00000236192 ENAHQ8N8S7 591 aaPredicted RBP13.99□□□□□ -0.17
VAMP4-201ENST00000236192 FAXDC2Q96IV6 333 aa13.99□□□□□ -0.17
VAMP4-201ENST00000236192 TMBIM4Q9HC24 238 aa13.99□□□□□ -0.17
VAMP4-201ENST00000236192 PTPRTO14522 1441 aa13.99□□□□□ -0.17
VAMP4-201ENST00000236192 GRM8O00222 908 aa13.99□□□□□ -0.17
VAMP4-201ENST00000236192 EIF4G3O43432 1585 aaKnown RBP13.99□□□□□ -0.17
VAMP4-201ENST00000236192 RFC5P40937 340 aa13.99□□□□□ -0.17
VAMP4-201ENST00000236192 SUCLA2Q9P2R7 463 aaPredicted RBP13.99□□□□□ -0.17
VAMP4-201ENST00000236192 GSTT1P30711 240 aa13.99□□□□□ -0.17
VAMP4-201ENST00000236192 NOP14P78316 857 aaKnown RBP13.99□□□□□ -0.17
VAMP4-201ENST00000236192 ZCWPW2Q504Y3 356 aa13.99□□□□□ -0.17
VAMP4-201ENST00000236192 AGAP11Q8TF27 550 aa13.99□□□□□ -0.17
VAMP4-201ENST00000236192 TGS1Q96RS0 853 aaKnown RBP13.99□□□□□ -0.17
VAMP4-201ENST00000236192 TMCO1Q9UM00 188 aa13.99□□□□□ -0.17
VAMP4-201ENST00000236192 SHANK2Q9UPX8 1470 aa13.99□□□□□ -0.17
VAMP4-201ENST00000236192 PHKBQ93100 1093 aa13.98□□□□□ -0.17
VAMP4-201ENST00000236192 PASKQ96RG2 1323 aa13.98□□□□□ -0.17
VAMP4-201ENST00000236192 TAF5LO75529 589 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms