RNA–Protein interactions for RNA: ENST00000231238.9

TTC1-201, Transcript of tetratricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-201ENST00000231238 GADD45BO75293 160 aaPredicted RBP11.17□□□□□ -0.62
TTC1-201ENST00000231238 BMP2P12643 396 aa11.17□□□□□ -0.62
TTC1-201ENST00000231238 ANGEL2Q5VTE6 544 aaKnown RBP11.17□□□□□ -0.62
TTC1-201ENST00000231238 DCAF15Q66K64 600 aa11.17□□□□□ -0.62
TTC1-201ENST00000231238 SLFN13Q68D06 897 aa11.17□□□□□ -0.62
TTC1-201ENST00000231238 METTL16Q86W50 562 aaKnown RBP11.17□□□□□ -0.62
TTC1-201ENST00000231238 NOSTRINQ8IVI9 506 aa11.17□□□□□ -0.62
TTC1-201ENST00000231238 JMYQ8N9B5 988 aa11.17□□□□□ -0.62
TTC1-201ENST00000231238 KDF1Q8NAX2 398 aaPredicted RBP11.17□□□□□ -0.62
TTC1-201ENST00000231238 DCAF4Q8WV16 495 aa11.17□□□□□ -0.62
TTC1-201ENST00000231238 TSEN34Q9BSV6 310 aaKnown RBP11.17□□□□□ -0.62
TTC1-201ENST00000231238 SPZ1Q9BXG8 430 aa11.17□□□□□ -0.62
TTC1-201ENST00000231238 UBA5Q9GZZ9 404 aa11.17□□□□□ -0.62
TTC1-201ENST00000231238 FOXP1Q9H334 677 aaPredicted RBP11.17□□□□□ -0.62
TTC1-201ENST00000231238 SH2D4AQ9H788 454 aa11.17□□□□□ -0.62
TTC1-201ENST00000231238 NOL7Q9UMY1 257 aaKnown RBP11.17□□□□□ -0.62
TTC1-201ENST00000231238 SCAF8Q9UPN6 1271 aaKnown RBP11.17□□□□□ -0.62
TTC1-201ENST00000231238 ELP1O95163 1332 aa11.16□□□□□ -0.62
TTC1-201ENST00000231238 SOBPA7XYQ1 873 aa11.16□□□□□ -0.62
TTC1-201ENST00000231238 KIF28PB7ZC32 967 aa11.16□□□□□ -0.62
TTC1-201ENST00000231238 DDNO94850 711 aaPredicted RBP11.16□□□□□ -0.62
TTC1-201ENST00000231238 EGFRP00533 1210 aa11.16□□□□□ -0.62
TTC1-201ENST00000231238 YBX3P16989 372 aaKnown RBP eCLIP11.16□□□□□ -0.62
TTC1-201ENST00000231238 ATP2B1P20020 1258 aa11.16□□□□□ -0.62
TTC1-201ENST00000231238 NAPAP54920 295 aa11.16□□□□□ -0.62
TTC1-201ENST00000231238 ZNF543Q08ER8 600 aa11.16□□□□□ -0.62
TTC1-201ENST00000231238 PKN1Q16512 942 aa11.16□□□□□ -0.62
TTC1-201ENST00000231238 GPT2Q8TD30 523 aa11.16□□□□□ -0.62
TTC1-201ENST00000231238 KCNG4Q8TDN1 519 aa11.16□□□□□ -0.62
TTC1-201ENST00000231238 USP28Q96RU2 1077 aa11.16□□□□□ -0.62
TTC1-201ENST00000231238 FEZ1Q99689 392 aa11.16□□□□□ -0.62
TTC1-201ENST00000231238 DEFB129Q9H1M3 183 aa11.16□□□□□ -0.62
TTC1-201ENST00000231238 GGA3Q9NZ52 723 aa11.16□□□□□ -0.62
TTC1-201ENST00000231238 GRIN3BO60391 1043 aa11.15□□□□□ -0.62
TTC1-201ENST00000231238 YEATS4O95619 227 aa11.15□□□□□ -0.62
TTC1-201ENST00000231238 ASNSP08243 561 aa11.15□□□□□ -0.62
TTC1-201ENST00000231238 U2AF2P26368 475 aaKnown RBP eCLIP11.15□□□□□ -0.623e-11■□□□□ 10.2
TTC1-201ENST00000231238 SMARCA1P28370 1054 aa11.15□□□□□ -0.62
TTC1-201ENST00000231238 EPS15P42566 896 aa11.15□□□□□ -0.62
TTC1-201ENST00000231238 NOVP48745 357 aa11.15□□□□□ -0.62
TTC1-201ENST00000231238 RILPL1Q5EBL4 403 aa11.15□□□□□ -0.62
TTC1-201ENST00000231238 ANO1Q5XXA6 986 aa11.15□□□□□ -0.62
TTC1-201ENST00000231238 CCDC73Q6ZRK6 1079 aa11.15□□□□□ -0.62
TTC1-201ENST00000231238 KCTD1Q719H9 257 aa11.15□□□□□ -0.62
TTC1-201ENST00000231238 RASGRP2Q7LDG7 609 aa11.15□□□□□ -0.62
TTC1-201ENST00000231238 PHF20Q9BVI0 1012 aa11.15□□□□□ -0.62
TTC1-201ENST00000231238 FTOQ9C0B1 505 aaKnown RBP eCLIP11.15□□□□□ -0.62
TTC1-201ENST00000231238 CPVLQ9H3G5 476 aa11.15□□□□□ -0.62
TTC1-201ENST00000231238 CYLDQ9NQC7 956 aa11.15□□□□□ -0.62
TTC1-201ENST00000231238 SH3GLB2Q9NR46 395 aa11.15□□□□□ -0.62
TTC1-201ENST00000231238 RTEL1Q9NZ71 1219 aa11.15□□□□□ -0.62
TTC1-201ENST00000231238 ZBTB21Q9ULJ3 1066 aa11.15□□□□□ -0.62
TTC1-201ENST00000231238 CEP131Q9UPN4 1083 aa11.15□□□□□ -0.62
TTC1-201ENST00000231238 F5H6K3 240 aa11.14□□□□□ -0.63
TTC1-201ENST00000231238 SPTLC2O15270 562 aa11.14□□□□□ -0.63
TTC1-201ENST00000231238 UPP2O95045 317 aa11.14□□□□□ -0.63
TTC1-201ENST00000231238 GNA11P29992 359 aa11.14□□□□□ -0.63
TTC1-201ENST00000231238 CAP2P40123 477 aa11.14□□□□□ -0.63
TTC1-201ENST00000231238 KLRC3Q07444 240 aa11.14□□□□□ -0.63
TTC1-201ENST00000231238 SHROOM1Q2M3G4 852 aaPredicted RBP11.14□□□□□ -0.63
TTC1-201ENST00000231238 TRPM4Q8TD43 1214 aa11.14□□□□□ -0.63
TTC1-201ENST00000231238 ZNF592Q92610 1267 aa11.14□□□□□ -0.63
TTC1-201ENST00000231238 MKL1Q969V6 931 aa11.14□□□□□ -0.63
TTC1-201ENST00000231238 DCPSQ96C86 337 aaKnown RBP11.14□□□□□ -0.63
TTC1-201ENST00000231238 PIGSQ96S52 555 aa11.14□□□□□ -0.63
TTC1-201ENST00000231238 C6orf50Q9HD87 102 aa11.14□□□□□ -0.63
TTC1-201ENST00000231238 ADARB2Q9NS39 739 aaKnown RBP11.14□□□□□ -0.63
TTC1-201ENST00000231238 RCOR1Q9UKL0 485 aa11.14□□□□□ -0.63
TTC1-201ENST00000231238 ASTN2O75129 1339 aaPredicted RBP11.14□□□□□ -0.63
TTC1-201ENST00000231238 CCDC194A0A1B0GVG4 234 aa11.13□□□□□ -0.63
TTC1-201ENST00000231238 hCG_1984214I3L0E3 225 aa11.13□□□□□ -0.63
TTC1-201ENST00000231238 BMP3P12645 472 aa11.13□□□□□ -0.63
TTC1-201ENST00000231238 SLC16A2P36021 539 aa11.13□□□□□ -0.63
TTC1-201ENST00000231238 ZYXQ15942 572 aaKnown RBP11.13□□□□□ -0.63
TTC1-201ENST00000231238 SUPT20HL1Q3ZLR7 823 aa11.13□□□□□ -0.63
TTC1-201ENST00000231238 CCDC183Q5T5S1 534 aa11.13□□□□□ -0.63
TTC1-201ENST00000231238 WWC2Q6AWC2 1192 aa11.13□□□□□ -0.63
TTC1-201ENST00000231238 GALNT17Q6IS24 598 aa11.13□□□□□ -0.63
TTC1-201ENST00000231238 BLIDQ8IZY5 108 aa11.13□□□□□ -0.63
TTC1-201ENST00000231238 ZNF713Q8N859 430 aaPredicted RBP11.13□□□□□ -0.63
TTC1-201ENST00000231238 GMCL1P1Q8NEA9 526 aa11.13□□□□□ -0.63
TTC1-201ENST00000231238 ZNF341Q9BYN7 854 aa11.13□□□□□ -0.63
TTC1-201ENST00000231238 PICK1Q9NRD5 415 aa11.13□□□□□ -0.63
TTC1-201ENST00000231238 BARHL2Q9NY43 387 aa11.13□□□□□ -0.63
TTC1-201ENST00000231238 PCDHA4Q9UN74 947 aa11.13□□□□□ -0.63
TTC1-201ENST00000231238 CLIC4Q9Y696 253 aa11.13□□□□□ -0.63
TTC1-201ENST00000231238 GOLGA6L3A6NEY3 463 aa11.12□□□□□ -0.63
TTC1-201ENST00000231238 TRIM75PA6NK02 468 aa11.12□□□□□ -0.63
TTC1-201ENST00000231238 TMEM232C9JQI7 657 aa11.12□□□□□ -0.63
TTC1-201ENST00000231238 CYTH3O43739 400 aa11.12□□□□□ -0.63
TTC1-201ENST00000231238 LETM1O95202 739 aaPredicted RBP11.12□□□□□ -0.63
TTC1-201ENST00000231238 NDUFB10O96000 172 aa11.12□□□□□ -0.63
TTC1-201ENST00000231238 SNHG28P0DPA3 235 aa11.12□□□□□ -0.63
TTC1-201ENST00000231238 RELBQ01201 579 aa11.12□□□□□ -0.63
TTC1-201ENST00000231238 CCAR1Q8IX12 1150 aaKnown RBP11.12□□□□□ -0.63
TTC1-201ENST00000231238 ADGRF4Q8IZF3 695 aa11.12□□□□□ -0.63
TTC1-201ENST00000231238 SPICE1Q8N0Z3 855 aa11.12□□□□□ -0.63
TTC1-201ENST00000231238 FAM177A1Q8N128 213 aaPredicted RBP11.12□□□□□ -0.63
TTC1-201ENST00000231238 PHTF2Q8N3S3 785 aa11.12□□□□□ -0.63
TTC1-201ENST00000231238 RIOX1Q9H6W3 641 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms