RNA–Protein interactions for RNA: ENST00000229387.6

RFX4-201, Transcript of regulatory factor X4, humanhuman

TSL 1 (best) BASIC

Gene RFX4, Length 3,378 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-201ENST00000229387 HVCN1Q96D96 273 aa6.29□□□□□ -1.4
RFX4-201ENST00000229387 SNX27Q96L92 541 aa6.29□□□□□ -1.4
RFX4-201ENST00000229387 TNMDQ9H2S6 317 aa6.29□□□□□ -1.4
RFX4-201ENST00000229387 MRPL46Q9H2W6 279 aaKnown RBP6.29□□□□□ -1.4
RFX4-201ENST00000229387 CLSTN2Q9H4D0 955 aa6.29□□□□□ -1.4
RFX4-201ENST00000229387 HELLSQ9NRZ9 838 aa6.29□□□□□ -1.4
RFX4-201ENST00000229387 ZNF148Q9UQR1 794 aa6.29□□□□□ -1.4
RFX4-201ENST00000229387 SH3GLB1Q9Y371 365 aa6.29□□□□□ -1.4
RFX4-201ENST00000229387 GOLGA8KD6RF30 607 aa6.29□□□□□ -1.4
RFX4-201ENST00000229387 H3BRB1 525 aa6.29□□□□□ -1.4
RFX4-201ENST00000229387 STK10O94804 968 aaKnown RBP6.29□□□□□ -1.4
RFX4-201ENST00000229387 GFPT2O94808 682 aa6.29□□□□□ -1.4
RFX4-201ENST00000229387 ZNF202O95125 648 aa6.29□□□□□ -1.4
RFX4-201ENST00000229387 F13A1P00488 732 aa6.29□□□□□ -1.4
RFX4-201ENST00000229387 GHRP10912 638 aa6.29□□□□□ -1.4
RFX4-201ENST00000229387 EPB41P11171 864 aaKnown RBP6.29□□□□□ -1.4
RFX4-201ENST00000229387 ALADP13716 330 aa6.29□□□□□ -1.4
RFX4-201ENST00000229387 SFPQP23246 707 aaKnown RBP eCLIP6.29□□□□□ -1.4
RFX4-201ENST00000229387 GNGT1P63211 74 aa6.29□□□□□ -1.4
RFX4-201ENST00000229387 EIF2B5Q13144 721 aaKnown RBP6.29□□□□□ -1.4
RFX4-201ENST00000229387 SH2D4BQ5SQS7 431 aa6.29□□□□□ -1.4
RFX4-201ENST00000229387 ARMCX5Q6P1M9 558 aa6.29□□□□□ -1.4
RFX4-201ENST00000229387 ERICH1Q86X53 443 aa6.29□□□□□ -1.4
RFX4-201ENST00000229387 MYO1HQ8N1T3 1032 aa6.29□□□□□ -1.4
RFX4-201ENST00000229387 STAMBPL1Q96FJ0 436 aa6.29□□□□□ -1.4
RFX4-201ENST00000229387 SMC6Q96SB8 1091 aa6.29□□□□□ -1.4
RFX4-201ENST00000229387 METTL22Q9BUU2 404 aaPredicted RBP6.29□□□□□ -1.4
RFX4-201ENST00000229387 TUT1Q9H6E5 874 aaKnown RBP6.29□□□□□ -1.4
RFX4-201ENST00000229387 FBXO9Q9UK97 447 aaPredicted RBP6.29□□□□□ -1.4
RFX4-201ENST00000229387 PNMA2Q9UL42 364 aa6.29□□□□□ -1.4
RFX4-201ENST00000229387 SLC4A7Q9Y6M7 1214 aa6.29□□□□□ -1.4
RFX4-201ENST00000229387 KDM6AO15550 1401 aaPredicted RBP6.28□□□□□ -1.4
RFX4-201ENST00000229387 TOPAZ1Q8N9V7 1692 aa6.28□□□□□ -1.4
RFX4-201ENST00000229387 HAND2P61296 217 aa6.28□□□□□ -1.4
RFX4-201ENST00000229387 PTPN12Q05209 780 aaKnown RBP6.28□□□□□ -1.4
RFX4-201ENST00000229387 KIF5AQ12840 1032 aa6.28□□□□□ -1.4
RFX4-201ENST00000229387 CNGA3Q16281 694 aa6.28□□□□□ -1.4
RFX4-201ENST00000229387 ME3Q16798 604 aa6.28□□□□□ -1.4
RFX4-201ENST00000229387 LARP1BQ659C4 914 aaKnown RBP6.28□□□□□ -1.4
RFX4-201ENST00000229387 DZIP1Q86YF9 867 aaKnown RBP6.28□□□□□ -1.4
RFX4-201ENST00000229387 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.28□□□□□ -1.4
RFX4-201ENST00000229387 ZNF653Q96CK0 615 aa6.28□□□□□ -1.4
RFX4-201ENST00000229387 DCAF5Q96JK2 942 aa6.28□□□□□ -1.4
RFX4-201ENST00000229387 TCHPQ9BT92 498 aa6.28□□□□□ -1.4
RFX4-201ENST00000229387 EPN3Q9H201 632 aa6.28□□□□□ -1.4
RFX4-201ENST00000229387 CAPN10Q9HC96 672 aa6.28□□□□□ -1.4
RFX4-201ENST00000229387 HESX1Q9UBX0 185 aa6.28□□□□□ -1.4
RFX4-201ENST00000229387 SAMM50Q9Y512 469 aa6.28□□□□□ -1.4
RFX4-201ENST00000229387 TLDC2A0PJX2 215 aa6.28□□□□□ -1.4
RFX4-201ENST00000229387 DPPA5A6NC42 116 aa6.28□□□□□ -1.4
RFX4-201ENST00000229387 VWA3AA6NCI4 1184 aa6.28□□□□□ -1.4
RFX4-201ENST00000229387 NUTM2BA6NNL0 878 aaPredicted RBP6.28□□□□□ -1.4
RFX4-201ENST00000229387 NUTM2EB1AL46 878 aaPredicted RBP6.28□□□□□ -1.4
RFX4-201ENST00000229387 BIRC5O15392 142 aa6.28□□□□□ -1.4
RFX4-201ENST00000229387 PRC1O43663 620 aa6.28□□□□□ -1.4
RFX4-201ENST00000229387 ZBED4O75132 1171 aa6.28□□□□□ -1.4
RFX4-201ENST00000229387 ALDH1L1O75891 902 aa6.28□□□□□ -1.4
RFX4-201ENST00000229387 PDGFRBP09619 1106 aa6.28□□□□□ -1.4
RFX4-201ENST00000229387 CCDC159P0C7I6 412 aa6.28□□□□□ -1.4
RFX4-201ENST00000229387 GJB2P29033 226 aa6.28□□□□□ -1.4
RFX4-201ENST00000229387 CCT6AP40227 531 aaKnown RBP6.28□□□□□ -1.4
RFX4-201ENST00000229387 DNM1Q05193 864 aaKnown RBP6.28□□□□□ -1.4
RFX4-201ENST00000229387 NUTM2AQ8IVF1 878 aaPredicted RBP6.28□□□□□ -1.4
RFX4-201ENST00000229387 DNAJC10Q8IXB1 793 aa6.28□□□□□ -1.4
RFX4-201ENST00000229387 PLPP6Q8IY26 295 aa6.28□□□□□ -1.4
RFX4-201ENST00000229387 SPOCK3Q9BQ16 436 aa6.28□□□□□ -1.4
RFX4-201ENST00000229387 OSBPL1AQ9BXW6 950 aa6.28□□□□□ -1.4
RFX4-201ENST00000229387 PRR12Q9ULL5 1215 aa6.28□□□□□ -1.4
RFX4-201ENST00000229387 SLC30A1Q9Y6M5 507 aa6.28□□□□□ -1.4
RFX4-201ENST00000229387 TMEM110-MUSTN1A8MSY1 372 aa6.27□□□□□ -1.4
RFX4-201ENST00000229387 PPP1R3GB7ZBB8 358 aa6.27□□□□□ -1.4
RFX4-201ENST00000229387 TTI1O43156 1089 aa6.27□□□□□ -1.4
RFX4-201ENST00000229387 CSE1LP55060 971 aaKnown RBP6.27□□□□□ -1.4
RFX4-201ENST00000229387 ELF3P78545 371 aaPredicted RBP6.27□□□□□ -1.4
RFX4-201ENST00000229387 MXRA7P84157 204 aa6.27□□□□□ -1.4
RFX4-201ENST00000229387 GUCY1B3Q02153 619 aa6.27□□□□□ -1.4
RFX4-201ENST00000229387 MECOMQ03112 1051 aa6.27□□□□□ -1.4
RFX4-201ENST00000229387 BCL2A1Q16548 175 aa6.27□□□□□ -1.4
RFX4-201ENST00000229387 NAA16Q6N069 864 aaPredicted RBP6.27□□□□□ -1.4
RFX4-201ENST00000229387 NANOGNBQ7Z5D8 188 aa6.27□□□□□ -1.4
RFX4-201ENST00000229387 EXOC3L1Q86VI1 746 aa6.27□□□□□ -1.4
RFX4-201ENST00000229387 CKAP2LQ8IYA6 745 aa6.27□□□□□ -1.4
RFX4-201ENST00000229387 SLC43A3Q8NBI5 491 aa6.27□□□□□ -1.4
RFX4-201ENST00000229387 UHMK1Q8TAS1 419 aaKnown RBP6.27□□□□□ -1.4
RFX4-201ENST00000229387 COG1Q8WTW3 980 aa6.27□□□□□ -1.4
RFX4-201ENST00000229387 CTNNBL1Q8WYA6 563 aaPredicted RBP6.27□□□□□ -1.4
RFX4-201ENST00000229387 NCSTNQ92542 709 aa6.27□□□□□ -1.4
RFX4-201ENST00000229387 NDNQ99608 321 aa6.27□□□□□ -1.4
RFX4-201ENST00000229387 ZCWPW1Q9H0M4 648 aa6.27□□□□□ -1.4
RFX4-201ENST00000229387 RABEP2Q9H5N1 569 aa6.27□□□□□ -1.4
RFX4-201ENST00000229387 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.27□□□□□ -1.4
RFX4-201ENST00000229387 BTG4Q9NY30 223 aa6.27□□□□□ -1.4
RFX4-201ENST00000229387 RGPD1P0DJD0 1748 aa6.27□□□□□ -1.41
RFX4-201ENST00000229387 NALCNQ8IZF0 1738 aa6.27□□□□□ -1.41
RFX4-201ENST00000229387 RGPD2P0DJD1 1756 aa6.27□□□□□ -1.41
RFX4-201ENST00000229387 STX6O43752 255 aa6.27□□□□□ -1.41
RFX4-201ENST00000229387 IBSPP21815 317 aaPredicted RBP6.27□□□□□ -1.41
RFX4-201ENST00000229387 KIF5BP33176 963 aa6.27□□□□□ -1.41
RFX4-201ENST00000229387 BPIFB4P59827 614 aa6.27□□□□□ -1.41
RFX4-201ENST00000229387 IGBP1P78318 339 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms