RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 DDTLA6NHG4 134 aaPredicted RBP24.81■■□□□ 1.56
CCDC9-201ENST00000221922 TECP42680 631 aa24.81■■□□□ 1.56
CCDC9-201ENST00000221922 CALCRLQ16602 461 aa24.81■■□□□ 1.56
CCDC9-201ENST00000221922 TMEM266Q2M3C6 531 aa24.81■■□□□ 1.56
CCDC9-201ENST00000221922 HNRNPLLQ8WVV9 542 aaKnown RBP24.81■■□□□ 1.56
CCDC9-201ENST00000221922 MKL1Q969V6 931 aa24.81■■□□□ 1.56
CCDC9-201ENST00000221922 MTMR8Q96EF0 704 aa24.81■■□□□ 1.56
CCDC9-201ENST00000221922 TRIM9Q9C026 710 aa24.81■■□□□ 1.56
CCDC9-201ENST00000221922 COL2A1P02458 1487 aaPredicted RBP24.81■■□□□ 1.56
CCDC9-201ENST00000221922 POTEB2H3BUK9 544 aa24.81■■□□□ 1.56
CCDC9-201ENST00000221922 FXR2P51116 673 aaKnown RBP eCLIP24.81■■□□□ 1.56
CCDC9-201ENST00000221922 TCP10Q12799 353 aa24.81■■□□□ 1.56
CCDC9-201ENST00000221922 GRIPAP1Q4V328 841 aa24.81■■□□□ 1.56
CCDC9-201ENST00000221922 TATDN1Q6P1N9 297 aa24.81■■□□□ 1.56
CCDC9-201ENST00000221922 SH3BP5LQ7L8J4 393 aa24.81■■□□□ 1.56
CCDC9-201ENST00000221922 POTEDQ86YR6 584 aa24.81■■□□□ 1.56
CCDC9-201ENST00000221922 SLC35F6Q8N357 371 aa24.81■■□□□ 1.56
CCDC9-201ENST00000221922 COA7Q96BR5 231 aa24.81■■□□□ 1.56
CCDC9-201ENST00000221922 RAB34Q9BZG1 259 aa24.81■■□□□ 1.56
CCDC9-201ENST00000221922 EXOC1Q9NV70 894 aa24.81■■□□□ 1.56
CCDC9-201ENST00000221922 TMEM260Q9NX78 707 aa24.81■■□□□ 1.56
CCDC9-201ENST00000221922 NYAP2Q9P242 653 aa24.81■■□□□ 1.56
CCDC9-201ENST00000221922 ATRNL1Q5VV63 1379 aa24.8■■□□□ 1.56
CCDC9-201ENST00000221922 CCDC66A2RUB6 948 aa24.8■■□□□ 1.56
CCDC9-201ENST00000221922 KIF4BQ2VIQ3 1234 aa24.8■■□□□ 1.56
CCDC9-201ENST00000221922 MSANTD4Q8NCY6 345 aa24.8■■□□□ 1.56
CCDC9-201ENST00000221922 LRRC15Q8TF66 581 aa24.8■■□□□ 1.56
CCDC9-201ENST00000221922 TRIM47Q96LD4 638 aa24.8■■□□□ 1.56
CCDC9-201ENST00000221922 MTMR9Q96QG7 549 aa24.8■■□□□ 1.56
CCDC9-201ENST00000221922 ANKZF1Q9H8Y5 726 aa24.8■■□□□ 1.56
CCDC9-201ENST00000221922 RIC8AQ9NPQ8 531 aa24.8■■□□□ 1.56
CCDC9-201ENST00000221922 MAGEC2Q9UBF1 373 aaPredicted RBP24.8■■□□□ 1.56
CCDC9-201ENST00000221922 RAB21Q9UL25 225 aa24.8■■□□□ 1.56
CCDC9-201ENST00000221922 BICDL2A1A5D9 508 aa24.79■■□□□ 1.56
CCDC9-201ENST00000221922 KRT9P35527 623 aa24.79■■□□□ 1.56
CCDC9-201ENST00000221922 SMC1AQ14683 1233 aaKnown RBP24.79■■□□□ 1.56
CCDC9-201ENST00000221922 LONRF2Q1L5Z9 754 aa24.79■■□□□ 1.56
CCDC9-201ENST00000221922 CCDC96Q2M329 555 aa24.79■■□□□ 1.56
CCDC9-201ENST00000221922 CERKLQ49MI3 558 aaPredicted RBP24.79■■□□□ 1.56
CCDC9-201ENST00000221922 KANSL2Q9H9L4 492 aa24.79■■□□□ 1.56
CCDC9-201ENST00000221922 ZKSCAN7Q9P0L1 754 aaPredicted RBP24.79■■□□□ 1.56
CCDC9-201ENST00000221922 STK17AQ9UEE5 414 aa24.79■■□□□ 1.56
CCDC9-201ENST00000221922 ASIC1P78348 528 aa24.79■■□□□ 1.56
CCDC9-201ENST00000221922 UBXN1Q04323 297 aa24.79■■□□□ 1.56
CCDC9-201ENST00000221922 NAPGQ99747 312 aaPredicted RBP24.79■■□□□ 1.56
CCDC9-201ENST00000221922 A0A1W2PQC6 194 aa24.78■■□□□ 1.56
CCDC9-201ENST00000221922 TRIM49BA6NDI0 452 aa24.78■■□□□ 1.56
CCDC9-201ENST00000221922 ENTPD3O75355 529 aa24.78■■□□□ 1.56
CCDC9-201ENST00000221922 ABL1P00519 1130 aa24.78■■□□□ 1.56
CCDC9-201ENST00000221922 ATP2B2Q01814 1243 aa24.78■■□□□ 1.56
CCDC9-201ENST00000221922 PDE4DQ08499 809 aa24.78■■□□□ 1.56
CCDC9-201ENST00000221922 TTBK2Q6IQ55 1244 aa24.78■■□□□ 1.56
CCDC9-201ENST00000221922 DCAF4Q8WV16 495 aa24.78■■□□□ 1.56
CCDC9-201ENST00000221922 MMTAG2Q9BU76 263 aaKnown RBP24.78■■□□□ 1.56
CCDC9-201ENST00000221922 ZSWIM4Q9H7M6 989 aa24.78■■□□□ 1.56
CCDC9-201ENST00000221922 PUF60Q9UHX1 559 aaKnown RBP24.78■■□□□ 1.56
CCDC9-201ENST00000221922 LGALS16A8MUM7 142 aa24.77■■□□□ 1.56
CCDC9-201ENST00000221922 MAP2K7O14733 419 aa24.77■■□□□ 1.56
CCDC9-201ENST00000221922 ZBTB5O15062 677 aa24.77■■□□□ 1.56
CCDC9-201ENST00000221922 PPIP5K2O43314 1243 aa24.77■■□□□ 1.56
CCDC9-201ENST00000221922 PPP1R11O60927 126 aaPredicted RBP24.77■■□□□ 1.56
CCDC9-201ENST00000221922 SLURP2P0DP57 97 aa24.77■■□□□ 1.56
CCDC9-201ENST00000221922 TXKP42681 527 aa24.77■■□□□ 1.56
CCDC9-201ENST00000221922 WHAMMP3Q1A5X7 153 aa24.77■■□□□ 1.56
CCDC9-201ENST00000221922 TTI2Q6NXR4 508 aa24.77■■□□□ 1.56
CCDC9-201ENST00000221922 ZSCAN29Q8IWY8 852 aaPredicted RBP24.77■■□□□ 1.56
CCDC9-201ENST00000221922 MB21D1Q8N884 522 aa24.77■■□□□ 1.56
CCDC9-201ENST00000221922 TRIM34Q9BYJ4 488 aa24.77■■□□□ 1.56
CCDC9-201ENST00000221922 ARFGEF1Q9Y6D6 1849 aa24.77■■□□□ 1.56
CCDC9-201ENST00000221922 PDIA5Q14554 519 aa24.77■■□□□ 1.56
CCDC9-201ENST00000221922 COBLL1Q53SF7 1204 aa24.77■■□□□ 1.56
CCDC9-201ENST00000221922 CNNM4Q6P4Q7 775 aa24.77■■□□□ 1.56
CCDC9-201ENST00000221922 ZNF507Q8TCN5 953 aa24.77■■□□□ 1.56
CCDC9-201ENST00000221922 CUL5Q93034 780 aa24.77■■□□□ 1.56
CCDC9-201ENST00000221922 LRWD1Q9UFC0 647 aa24.77■■□□□ 1.56
CCDC9-201ENST00000221922 YDJCA8MPS7 323 aa24.76■■□□□ 1.55
CCDC9-201ENST00000221922 EEF2P13639 858 aaKnown RBP24.76■■□□□ 1.55
CCDC9-201ENST00000221922 CCNE1P24864 410 aa24.76■■□□□ 1.55
CCDC9-201ENST00000221922 OAS2P29728 719 aaKnown RBP24.76■■□□□ 1.55
CCDC9-201ENST00000221922 MRPL12P52815 198 aaKnown RBP24.76■■□□□ 1.55
CCDC9-201ENST00000221922 PMS1P54277 932 aaKnown RBP24.76■■□□□ 1.55
CCDC9-201ENST00000221922 PPP4R3AQ6IN85 833 aa24.76■■□□□ 1.55
CCDC9-201ENST00000221922 TMEM179Q6ZVK1 233 aa24.76■■□□□ 1.55
CCDC9-201ENST00000221922 SV2BQ7L1I2 683 aa24.76■■□□□ 1.55
CCDC9-201ENST00000221922 FAM114A1Q8IWE2 563 aa24.76■■□□□ 1.55
CCDC9-201ENST00000221922 DNAJC7Q99615 494 aa24.76■■□□□ 1.55
CCDC9-201ENST00000221922 EPN1Q9Y6I3 576 aaPredicted RBP24.76■■□□□ 1.55
CCDC9-201ENST00000221922 FAM196BA6NMK8 535 aa24.76■■□□□ 1.55
CCDC9-201ENST00000221922 POLR3GO15318 223 aaPredicted RBP24.76■■□□□ 1.55
CCDC9-201ENST00000221922 HOXA7P31268 230 aaPredicted RBP24.76■■□□□ 1.55
CCDC9-201ENST00000221922 CLK2P49760 499 aaKnown RBP24.76■■□□□ 1.55
CCDC9-201ENST00000221922 KCTD1Q719H9 257 aa24.76■■□□□ 1.55
CCDC9-201ENST00000221922 OR8K1Q8NGG5 319 aa24.76■■□□□ 1.55
CCDC9-201ENST00000221922 P2RX5Q93086 422 aa24.76■■□□□ 1.55
CCDC9-201ENST00000221922 CDK5RAP3Q96JB5 506 aa24.76■■□□□ 1.55
CCDC9-201ENST00000221922 GLT8D2Q9H1C3 349 aa24.76■■□□□ 1.55
CCDC9-201ENST00000221922 SLF1Q9BQI6 1058 aa24.75■■□□□ 1.55
CCDC9-201ENST00000221922 REXO2Q9Y3B8 237 aaKnown RBP24.75■■□□□ 1.55
CCDC9-201ENST00000221922 TTC26A0AVF1 554 aa24.74■■□□□ 1.55
CCDC9-201ENST00000221922 USP17L10C9JJH3 530 aa24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms