RNA–Protein interactions for RNA: ENST00000221899.7

CACTIN-201, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-201ENST00000221899 PALM3A6NDB9 673 aaPredicted RBP20.57■□□□□ 0.88
CACTIN-201ENST00000221899 GOLGA6CA6NDK9 693 aa20.57■□□□□ 0.88
CACTIN-201ENST00000221899 LRRC53A6NM62 1247 aa20.57■□□□□ 0.88
CACTIN-201ENST00000221899 GOLGA6DP0CG33 693 aa20.57■□□□□ 0.88
CACTIN-201ENST00000221899 VWA3BQ502W6 1294 aa20.57■□□□□ 0.88
CACTIN-201ENST00000221899 GALNT17Q6IS24 598 aa20.57■□□□□ 0.88
CACTIN-201ENST00000221899 FNBP4Q8N3X1 1017 aaPredicted RBP20.57■□□□□ 0.88
CACTIN-201ENST00000221899 CCDC155Q8N6L0 562 aa20.57■□□□□ 0.88
CACTIN-201ENST00000221899 FAM76AQ8TAV0 307 aa20.57■□□□□ 0.88
CACTIN-201ENST00000221899 TBCKQ8TEA7 893 aa20.57■□□□□ 0.88
CACTIN-201ENST00000221899 AK8Q96MA6 479 aa20.57■□□□□ 0.88
CACTIN-201ENST00000221899 MAGEF1Q9HAY2 307 aa20.57■□□□□ 0.88
CACTIN-201ENST00000221899 TMEM260Q9NX78 707 aa20.57■□□□□ 0.88
CACTIN-201ENST00000221899 GOLGA6AQ9NYA3 693 aa20.57■□□□□ 0.88
CACTIN-201ENST00000221899 FAM184BQ9ULE4 1060 aa20.57■□□□□ 0.88
CACTIN-201ENST00000221899 MYH1P12882 1939 aa20.57■□□□□ 0.88
CACTIN-201ENST00000221899 PPFIA4O75335 1185 aa20.57■□□□□ 0.88
CACTIN-201ENST00000221899 CLEC4GQ6UXB4 293 aa20.57■□□□□ 0.88
CACTIN-201ENST00000221899 NEK8Q86SG6 692 aa20.57■□□□□ 0.88
CACTIN-201ENST00000221899 SPATA4Q8NEY3 305 aa20.57■□□□□ 0.88
CACTIN-201ENST00000221899 OSBPL9Q96SU4 736 aa20.57■□□□□ 0.88
CACTIN-201ENST00000221899 ZMYND12Q9H0C1 365 aa20.57■□□□□ 0.88
CACTIN-201ENST00000221899 EHD4Q9H223 541 aa20.57■□□□□ 0.88
CACTIN-201ENST00000221899 CDK17Q00537 523 aa20.56■□□□□ 0.88
CACTIN-201ENST00000221899 KRT25Q7Z3Z0 450 aa20.56■□□□□ 0.88
CACTIN-201ENST00000221899 ANKS1AQ92625 1134 aa20.56■□□□□ 0.88
CACTIN-201ENST00000221899 SALL4Q9UJQ4 1053 aa20.56■□□□□ 0.88
CACTIN-201ENST00000221899 SIK3Q9Y2K2 1263 aa20.56■□□□□ 0.88
CACTIN-201ENST00000221899 MYH10P35580 1976 aa20.56■□□□□ 0.88
CACTIN-201ENST00000221899 BUB1O43683 1085 aa20.56■□□□□ 0.88
CACTIN-201ENST00000221899 AMPD3Q01432 767 aa20.56■□□□□ 0.88
CACTIN-201ENST00000221899 FIGNQ5HY92 759 aa20.56■□□□□ 0.88
CACTIN-201ENST00000221899 TTC19Q6DKK2 380 aaPredicted RBP20.56■□□□□ 0.88
CACTIN-201ENST00000221899 LINC00116Q8NCU8 138 aa20.56■□□□□ 0.88
CACTIN-201ENST00000221899 CALML4Q96GE6 196 aa20.56■□□□□ 0.88
CACTIN-201ENST00000221899 MYMKA6NI61 221 aa20.55■□□□□ 0.88
CACTIN-201ENST00000221899 LDHBP07195 334 aaKnown RBP20.55■□□□□ 0.88
CACTIN-201ENST00000221899 DNA2P51530 1060 aa20.55■□□□□ 0.88
CACTIN-201ENST00000221899 LRRC41Q15345 812 aa20.55■□□□□ 0.88
CACTIN-201ENST00000221899 DNAJC21Q5F1R6 531 aaKnown RBP20.55■□□□□ 0.88
CACTIN-201ENST00000221899 CCDC181Q5TID7 509 aa20.55■□□□□ 0.88
CACTIN-201ENST00000221899 TMED8Q6PL24 325 aaPredicted RBP20.55■□□□□ 0.88
CACTIN-201ENST00000221899 MMGT1Q8N4V1 131 aa20.55■□□□□ 0.88
CACTIN-201ENST00000221899 GLIS3Q8NEA6 775 aa20.55■□□□□ 0.88
CACTIN-201ENST00000221899 GFPT1Q06210 699 aaPredicted RBP20.55■□□□□ 0.88
CACTIN-201ENST00000221899 SV2BQ7L1I2 683 aa20.55■□□□□ 0.88
CACTIN-201ENST00000221899 NLRP3Q96P20 1036 aa20.55■□□□□ 0.88
CACTIN-201ENST00000221899 RASA1P20936 1047 aa20.54■□□□□ 0.88
CACTIN-201ENST00000221899 NAP1L1P55209 391 aaKnown RBP20.54■□□□□ 0.88
CACTIN-201ENST00000221899 CENPPQ6IPU0 288 aa20.54■□□□□ 0.88
CACTIN-201ENST00000221899 TMC4Q7Z404 712 aa20.54■□□□□ 0.88
CACTIN-201ENST00000221899 PIGSQ96S52 555 aa20.54■□□□□ 0.88
CACTIN-201ENST00000221899 UBA5Q9GZZ9 404 aa20.54■□□□□ 0.88
CACTIN-201ENST00000221899 C6orf50Q9HD87 102 aa20.54■□□□□ 0.88
CACTIN-201ENST00000221899 SRP68Q9UHB9 627 aaKnown RBP20.54■□□□□ 0.88
CACTIN-201ENST00000221899 RASSF7Q02833 373 aa20.54■□□□□ 0.88
CACTIN-201ENST00000221899 GRB10Q13322 594 aa20.54■□□□□ 0.88
CACTIN-201ENST00000221899 SOGA3Q5TF21 947 aa20.54■□□□□ 0.88
CACTIN-201ENST00000221899 AMOTL1Q8IY63 956 aa20.54■□□□□ 0.88
CACTIN-201ENST00000221899 GPR101Q96P66 508 aaPredicted RBP20.54■□□□□ 0.88
CACTIN-201ENST00000221899 TANGO6Q9C0B7 1094 aa20.54■□□□□ 0.88
CACTIN-201ENST00000221899 BLOC1S4Q9NUP1 217 aa20.54■□□□□ 0.88
CACTIN-201ENST00000221899 MAGEA1P43355 309 aa20.53■□□□□ 0.88
CACTIN-201ENST00000221899 NBPF5PQ86XG9 351 aaPredicted RBP20.53■□□□□ 0.88
CACTIN-201ENST00000221899 ALS2CR12Q96Q35 445 aa20.53■□□□□ 0.88
CACTIN-201ENST00000221899 ANKRD2Q9GZV1 360 aa20.53■□□□□ 0.88
CACTIN-201ENST00000221899 POTEMA6NI47 508 aa20.53■□□□□ 0.88
CACTIN-201ENST00000221899 MAGEA9P43362 315 aa20.53■□□□□ 0.88
CACTIN-201ENST00000221899 SEMA3FQ13275 785 aa20.53■□□□□ 0.88
CACTIN-201ENST00000221899 SPTY2D1Q68D10 685 aaPredicted RBP20.53■□□□□ 0.88
CACTIN-201ENST00000221899 TSEN2Q8NCE0 465 aaKnown RBP20.53■□□□□ 0.88
CACTIN-201ENST00000221899 MS4A14Q96JA4 679 aa20.53■□□□□ 0.88
CACTIN-201ENST00000221899 HYOU1Q9Y4L1 999 aa20.53■□□□□ 0.88
CACTIN-201ENST00000221899 COL14A1Q05707 1796 aaKnown RBP20.53■□□□□ 0.88
CACTIN-201ENST00000221899 ZPR1O75312 459 aa20.52■□□□□ 0.88
CACTIN-201ENST00000221899 HNRNPH3P31942 346 aaKnown RBP20.52■□□□□ 0.88
CACTIN-201ENST00000221899 CORO7P57737 925 aa20.52■□□□□ 0.88
CACTIN-201ENST00000221899 CDK5RAP3Q96JB5 506 aa20.52■□□□□ 0.88
CACTIN-201ENST00000221899 NLRC4Q9NPP4 1024 aa20.52■□□□□ 0.88
CACTIN-201ENST00000221899 SEC63Q9UGP8 760 aaKnown RBP20.52■□□□□ 0.88
CACTIN-201ENST00000221899 SLC1A4P43007 532 aa20.52■□□□□ 0.88
CACTIN-201ENST00000221899 MAN2A1Q16706 1144 aa20.52■□□□□ 0.88
CACTIN-201ENST00000221899 TDRD12Q587J7 1177 aaKnown RBP20.52■□□□□ 0.88
CACTIN-201ENST00000221899 HAUS3Q68CZ6 603 aa20.52■□□□□ 0.88
CACTIN-201ENST00000221899 PACS2Q86VP3 889 aa20.52■□□□□ 0.88
CACTIN-201ENST00000221899 MTMR8Q96EF0 704 aa20.52■□□□□ 0.88
CACTIN-201ENST00000221899 PNMA5Q96PV4 448 aa20.52■□□□□ 0.88
CACTIN-201ENST00000221899 GNA11P29992 359 aa20.51■□□□□ 0.87
CACTIN-201ENST00000221899 CCT5P48643 541 aa20.51■□□□□ 0.87
CACTIN-201ENST00000221899 CACNA2D4Q7Z3S7 1137 aa20.51■□□□□ 0.87
CACTIN-201ENST00000221899 LARP4BQ92615 738 aaKnown RBP20.51■□□□□ 0.87
CACTIN-201ENST00000221899 NUDT12Q9BQG2 462 aa20.51■□□□□ 0.87
CACTIN-201ENST00000221899 RBM12Q9NTZ6 932 aaKnown RBP20.51■□□□□ 0.87
CACTIN-201ENST00000221899 ANKIB1Q9P2G1 1089 aa20.51■□□□□ 0.87
CACTIN-201ENST00000221899 CCDC88AQ3V6T2 1871 aa20.51■□□□□ 0.87
CACTIN-201ENST00000221899 PPP1R2P41236 205 aa20.51■□□□□ 0.87
CACTIN-201ENST00000221899 IRAK1P51617 712 aa20.51■□□□□ 0.87
CACTIN-201ENST00000221899 CALCRLQ16602 461 aa20.51■□□□□ 0.87
CACTIN-201ENST00000221899 EYA3Q99504 573 aa20.51■□□□□ 0.87
CACTIN-201ENST00000221899 SPZ1Q9BXG8 430 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms