RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 MRC1P22897 1456 aa13.66□□□□□ -0.22
TM9SF4-201ENST00000217315 PPP1R3GB7ZBB8 358 aa13.66□□□□□ -0.22
TM9SF4-201ENST00000217315 TCP10L2B9ZVM9 353 aa13.66□□□□□ -0.22
TM9SF4-201ENST00000217315 TADA3O75528 432 aa13.66□□□□□ -0.22
TM9SF4-201ENST00000217315 CXCR5P32302 372 aa13.66□□□□□ -0.22
TM9SF4-201ENST00000217315 EVX2Q03828 476 aa13.66□□□□□ -0.22
TM9SF4-201ENST00000217315 TMED8Q6PL24 325 aaPredicted RBP13.66□□□□□ -0.22
TM9SF4-201ENST00000217315 GJA10Q969M2 543 aa13.66□□□□□ -0.22
TM9SF4-201ENST00000217315 DNAJC5Q9H3Z4 198 aa13.66□□□□□ -0.22
TM9SF4-201ENST00000217315 FRMD4BQ9Y2L6 1034 aa13.66□□□□□ -0.22
TM9SF4-201ENST00000217315 XRCC5P13010 732 aaKnown RBP13.66□□□□□ -0.22
TM9SF4-201ENST00000217315 NT5C2P49902 561 aa13.66□□□□□ -0.22
TM9SF4-201ENST00000217315 TRIM9Q9C026 710 aa13.66□□□□□ -0.22
TM9SF4-201ENST00000217315 USP17L10C9JJH3 530 aa13.65□□□□□ -0.22
TM9SF4-201ENST00000217315 CALUO43852 315 aaPredicted RBP13.65□□□□□ -0.22
TM9SF4-201ENST00000217315 VEGFAP15692 232 aaPredicted RBP13.65□□□□□ -0.22
TM9SF4-201ENST00000217315 BMP6P22004 513 aa13.65□□□□□ -0.22
TM9SF4-201ENST00000217315 VWA3BQ502W6 1294 aa13.65□□□□□ -0.22
TM9SF4-201ENST00000217315 REXO1L1PQ8IX06 675 aa13.65□□□□□ -0.22
TM9SF4-201ENST00000217315 LARGE2Q8N3Y3 721 aa13.65□□□□□ -0.22
TM9SF4-201ENST00000217315 CCSER1Q9C0I3 900 aa13.65□□□□□ -0.22
TM9SF4-201ENST00000217315 KANSL2Q9H9L4 492 aa13.65□□□□□ -0.22
TM9SF4-201ENST00000217315 LRRC37A3O60309 1634 aa13.65□□□□□ -0.22
TM9SF4-201ENST00000217315 FLT1P17948 1338 aa13.65□□□□□ -0.22
TM9SF4-201ENST00000217315 A0A087X0B3 334 aa13.65□□□□□ -0.22
TM9SF4-201ENST00000217315 ARHGEF35A5YM69 484 aa13.65□□□□□ -0.22
TM9SF4-201ENST00000217315 TMEM110-MUSTN1A8MSY1 372 aa13.65□□□□□ -0.22
TM9SF4-201ENST00000217315 SRGAP2O75044 1071 aa13.65□□□□□ -0.22
TM9SF4-201ENST00000217315 GYPCP04921 128 aa13.65□□□□□ -0.22
TM9SF4-201ENST00000217315 EIF4A3P38919 411 aaKnown RBP13.65□□□□□ -0.22
TM9SF4-201ENST00000217315 UBXN2AP68543 259 aa13.65□□□□□ -0.22
TM9SF4-201ENST00000217315 KIAA0753Q2KHM9 967 aa13.65□□□□□ -0.22
TM9SF4-201ENST00000217315 SLC10A5Q5PT55 438 aa13.65□□□□□ -0.22
TM9SF4-201ENST00000217315 KLHL7Q8IXQ5 586 aa13.65□□□□□ -0.22
TM9SF4-201ENST00000217315 RABEP2Q9H5N1 569 aa13.65□□□□□ -0.22
TM9SF4-201ENST00000217315 HOMER2Q9NSB8 354 aa13.65□□□□□ -0.22
TM9SF4-201ENST00000217315 LMO7Q8WWI1 1683 aa13.65□□□□□ -0.22
TM9SF4-201ENST00000217315 CNTNAP4Q9C0A0 1308 aa13.65□□□□□ -0.22
TM9SF4-201ENST00000217315 OPA1O60313 960 aa13.65□□□□□ -0.22
TM9SF4-201ENST00000217315 NR2F2P24468 414 aa13.65□□□□□ -0.22
TM9SF4-201ENST00000217315 PPARDQ03181 441 aa13.65□□□□□ -0.22
TM9SF4-201ENST00000217315 ADSSL1Q8N142 457 aa13.65□□□□□ -0.22
TM9SF4-201ENST00000217315 LMBR1Q8WVP7 490 aa13.65□□□□□ -0.22
TM9SF4-201ENST00000217315 IQCDQ96DY2 449 aa13.65□□□□□ -0.22
TM9SF4-201ENST00000217315 POLD4Q9HCU8 107 aa13.65□□□□□ -0.22
TM9SF4-201ENST00000217315 CLRN2A0PK11 232 aa13.64□□□□□ -0.23
TM9SF4-201ENST00000217315 STXBP3O00186 592 aa13.64□□□□□ -0.23
TM9SF4-201ENST00000217315 CEP104O60308 925 aa13.64□□□□□ -0.23
TM9SF4-201ENST00000217315 STK4Q13043 487 aa13.64□□□□□ -0.23
TM9SF4-201ENST00000217315 CFAP58Q5T655 872 aa13.64□□□□□ -0.23
TM9SF4-201ENST00000217315 TTBK2Q6IQ55 1244 aa13.64□□□□□ -0.23
TM9SF4-201ENST00000217315 SLFN12Q8IYM2 578 aa13.64□□□□□ -0.23
TM9SF4-201ENST00000217315 TBC1D16Q8TBP0 767 aa13.64□□□□□ -0.23
TM9SF4-201ENST00000217315 BICD1Q96G01 975 aa13.64□□□□□ -0.23
TM9SF4-201ENST00000217315 RPGRIP1Q96KN7 1286 aa13.64□□□□□ -0.23
TM9SF4-201ENST00000217315 SPZ1Q9BXG8 430 aa13.64□□□□□ -0.23
TM9SF4-201ENST00000217315 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.64□□□□□ -0.23
TM9SF4-201ENST00000217315 ZCCHC17Q9NP64 241 aaKnown RBP13.64□□□□□ -0.23
TM9SF4-201ENST00000217315 LIMA1Q9UHB6 759 aaKnown RBP13.64□□□□□ -0.23
TM9SF4-201ENST00000217315 MRFAP1Q9Y605 127 aa13.64□□□□□ -0.23
TM9SF4-201ENST00000217315 ZEB2O60315 1214 aa13.64□□□□□ -0.23
TM9SF4-201ENST00000217315 GAS7O60861 476 aa13.64□□□□□ -0.23
TM9SF4-201ENST00000217315 MMP10P09238 476 aa13.64□□□□□ -0.23
TM9SF4-201ENST00000217315 GCFC2P16383 781 aaKnown RBP13.64□□□□□ -0.23
TM9SF4-201ENST00000217315 TNNC1P63316 161 aa13.64□□□□□ -0.23
TM9SF4-201ENST00000217315 ANKRD40Q6AI12 368 aa13.64□□□□□ -0.23
TM9SF4-201ENST00000217315 ELOA2Q8IYF1 753 aaPredicted RBP13.64□□□□□ -0.23
TM9SF4-201ENST00000217315 CSRNP1Q96S65 589 aa13.64□□□□□ -0.23
TM9SF4-201ENST00000217315 ST7Q9NRC1 585 aa13.64□□□□□ -0.23
TM9SF4-201ENST00000217315 FAM205AQ6ZU69 1335 aa13.64□□□□□ -0.23
TM9SF4-201ENST00000217315 hCG_1984214I3L0E3 225 aa13.64□□□□□ -0.23
TM9SF4-201ENST00000217315 GNA14O95837 355 aa13.64□□□□□ -0.23
TM9SF4-201ENST00000217315 DLGAP5Q15398 846 aa13.64□□□□□ -0.23
TM9SF4-201ENST00000217315 CFAP221Q4G0U5 840 aa13.64□□□□□ -0.23
TM9SF4-201ENST00000217315 UNC13DQ70J99 1090 aa13.64□□□□□ -0.23
TM9SF4-201ENST00000217315 ZNF713Q8N859 430 aaPredicted RBP13.64□□□□□ -0.23
TM9SF4-201ENST00000217315 CTNNBL1Q8WYA6 563 aaPredicted RBP13.64□□□□□ -0.23
TM9SF4-201ENST00000217315 NUCKS1Q9H1E3 243 aaKnown RBP13.64□□□□□ -0.23
TM9SF4-201ENST00000217315 RIC8AQ9NPQ8 531 aa13.64□□□□□ -0.23
TM9SF4-201ENST00000217315 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.64□□□□□ -0.23
TM9SF4-201ENST00000217315 DAGLAQ9Y4D2 1042 aa13.64□□□□□ -0.23
TM9SF4-201ENST00000217315 GOLGA6BA6NDN3 693 aa13.63□□□□□ -0.23
TM9SF4-201ENST00000217315 EXOC3O60645 756 aa13.63□□□□□ -0.23
TM9SF4-201ENST00000217315 PLA2G4BP0C869 781 aa13.63□□□□□ -0.23
TM9SF4-201ENST00000217315 VPS72Q15906 364 aa13.63□□□□□ -0.23
TM9SF4-201ENST00000217315 CDC37Q16543 378 aaPredicted RBP13.63□□□□□ -0.23
TM9SF4-201ENST00000217315 CC2D1AQ6P1N0 951 aaPredicted RBP13.63□□□□□ -0.23
TM9SF4-201ENST00000217315 FAM76AQ8TAV0 307 aa13.63□□□□□ -0.23
TM9SF4-201ENST00000217315 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.63□□□□□ -0.23
TM9SF4-201ENST00000217315 COL4A3BPQ9Y5P4 624 aa13.63□□□□□ -0.23
TM9SF4-201ENST00000217315 HOXA13P31271 388 aaPredicted RBP13.63□□□□□ -0.23
TM9SF4-201ENST00000217315 CYP2J2P51589 502 aa13.63□□□□□ -0.23
TM9SF4-201ENST00000217315 MRPS25P82663 173 aaKnown RBP13.63□□□□□ -0.23
TM9SF4-201ENST00000217315 TMC4Q7Z404 712 aa13.63□□□□□ -0.23
TM9SF4-201ENST00000217315 FNBP4Q8N3X1 1017 aaPredicted RBP13.63□□□□□ -0.23
TM9SF4-201ENST00000217315 PI4KBQ9UBF8 816 aa13.63□□□□□ -0.23
TM9SF4-201ENST00000217315 HDAC6Q9UBN7 1215 aa13.63□□□□□ -0.23
TM9SF4-201ENST00000217315 HYOU1Q9Y4L1 999 aa13.63□□□□□ -0.23
TM9SF4-201ENST00000217315 AFDNP55196 1824 aaKnown RBP13.63□□□□□ -0.23
TM9SF4-201ENST00000217315 ZNF18P17022 549 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms