RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 NDST4Q9H3R1 872 aa14.81□□□□□ -0.04
SRP54-201ENST00000216774 JADE2Q9NQC1 790 aa14.81□□□□□ -0.04
SRP54-201ENST00000216774 SAP30BPQ9UHR5 308 aaKnown RBP14.81□□□□□ -0.04
SRP54-201ENST00000216774 SNX12Q9UMY4 172 aa14.81□□□□□ -0.04
SRP54-201ENST00000216774 SIK3Q9Y2K2 1263 aa14.81□□□□□ -0.04
SRP54-201ENST00000216774 DDX60LQ5H9U9 1706 aaKnown RBP14.8□□□□□ -0.04
SRP54-201ENST00000216774 MACROD2A1Z1Q3 448 aa14.8□□□□□ -0.04
SRP54-201ENST00000216774 ZNF263O14978 683 aa14.8□□□□□ -0.04
SRP54-201ENST00000216774 TACC1O75410 805 aa14.8□□□□□ -0.04
SRP54-201ENST00000216774 PLCG2P16885 1265 aa14.8□□□□□ -0.04
SRP54-201ENST00000216774 TNNT3P45378 269 aaPredicted RBP14.8□□□□□ -0.04
SRP54-201ENST00000216774 LRRC63Q05C16 580 aa14.8□□□□□ -0.04
SRP54-201ENST00000216774 SLC20A2Q08357 652 aa14.8□□□□□ -0.04
SRP54-201ENST00000216774 GRAPQ13588 217 aa14.8□□□□□ -0.04
SRP54-201ENST00000216774 MAN2A1Q16706 1144 aa14.8□□□□□ -0.04
SRP54-201ENST00000216774 CCDC96Q2M329 555 aa14.8□□□□□ -0.04
SRP54-201ENST00000216774 GRAPLQ8TC17 118 aaPredicted RBP14.8□□□□□ -0.04
SRP54-201ENST00000216774 IFIH1Q9BYX4 1025 aaKnown RBP14.8□□□□□ -0.04
SRP54-201ENST00000216774 SH2D4AQ9H788 454 aa14.8□□□□□ -0.04
SRP54-201ENST00000216774 LRWD1Q9UFC0 647 aa14.8□□□□□ -0.04
SRP54-201ENST00000216774 DUSP10Q9Y6W6 482 aa14.8□□□□□ -0.04
SRP54-201ENST00000216774 GRB10Q13322 594 aa14.8□□□□□ -0.04
SRP54-201ENST00000216774 GRIK5Q16478 980 aa14.8□□□□□ -0.04
SRP54-201ENST00000216774 CALCRLQ16602 461 aa14.8□□□□□ -0.04
SRP54-201ENST00000216774 TMEM266Q2M3C6 531 aa14.8□□□□□ -0.04
SRP54-201ENST00000216774 USP17L2Q6R6M4 530 aa14.8□□□□□ -0.04
SRP54-201ENST00000216774 ARHGAP27Q6ZUM4 889 aa14.8□□□□□ -0.04
SRP54-201ENST00000216774 SMIM5Q71RC9 77 aa14.8□□□□□ -0.04
SRP54-201ENST00000216774 POTEDQ86YR6 584 aa14.8□□□□□ -0.04
SRP54-201ENST00000216774 GOLGA6L1Q8N7Z2 621 aa14.8□□□□□ -0.04
SRP54-201ENST00000216774 RAB34Q9BZG1 259 aa14.8□□□□□ -0.04
SRP54-201ENST00000216774 LRRC27Q9C0I9 530 aa14.8□□□□□ -0.04
SRP54-201ENST00000216774 CPVLQ9H3G5 476 aa14.8□□□□□ -0.04
SRP54-201ENST00000216774 SLC39A2Q9NP94 309 aa14.8□□□□□ -0.04
SRP54-201ENST00000216774 BLOC1S4Q9NUP1 217 aa14.8□□□□□ -0.04
SRP54-201ENST00000216774 RNF216Q9NWF9 866 aaPredicted RBP14.8□□□□□ -0.04
SRP54-201ENST00000216774 PCDHA13Q9Y5I0 950 aa14.8□□□□□ -0.04
SRP54-201ENST00000216774 TNRC6CQ9HCJ0 1690 aaKnown RBP14.79□□□□□ -0.04
SRP54-201ENST00000216774 GPR75-ASB3A0A0A6YYF3 556 aa14.79□□□□□ -0.04
SRP54-201ENST00000216774 PDE2AO00408 941 aaPredicted RBP14.79□□□□□ -0.04
SRP54-201ENST00000216774 RNF40O75150 1001 aa14.79□□□□□ -0.04
SRP54-201ENST00000216774 BTDP43251 543 aa14.79□□□□□ -0.04
SRP54-201ENST00000216774 PDIA5Q14554 519 aa14.79□□□□□ -0.04
SRP54-201ENST00000216774 CCNI2Q6ZMN8 369 aaPredicted RBP14.79□□□□□ -0.04
SRP54-201ENST00000216774 CCDC24Q8N4L8 307 aa14.79□□□□□ -0.04
SRP54-201ENST00000216774 MMGT1Q8N4V1 131 aa14.79□□□□□ -0.04
SRP54-201ENST00000216774 LARP4BQ92615 738 aaKnown RBP14.79□□□□□ -0.04
SRP54-201ENST00000216774 PIGSQ96S52 555 aa14.79□□□□□ -0.04
SRP54-201ENST00000216774 EDEM3Q9BZQ6 932 aa14.79□□□□□ -0.04
SRP54-201ENST00000216774 RIOX1Q9H6W3 641 aa14.79□□□□□ -0.04
SRP54-201ENST00000216774 FAM204AQ9H8W3 233 aa14.79□□□□□ -0.04
SRP54-201ENST00000216774 ARHGAP20Q9P2F6 1191 aa14.79□□□□□ -0.04
SRP54-201ENST00000216774 ZC3H4Q9UPT8 1303 aaKnown RBP14.79□□□□□ -0.04
SRP54-201ENST00000216774 MYMKA6NI61 221 aa14.78□□□□□ -0.04
SRP54-201ENST00000216774 GNPATO15228 680 aa14.78□□□□□ -0.04
SRP54-201ENST00000216774 SYF2O95926 243 aaKnown RBP14.78□□□□□ -0.04
SRP54-201ENST00000216774 TXKP42681 527 aa14.78□□□□□ -0.04
SRP54-201ENST00000216774 KIF11P52732 1056 aa14.78□□□□□ -0.04
SRP54-201ENST00000216774 PSMD2Q13200 908 aa14.78□□□□□ -0.04
SRP54-201ENST00000216774 C2CD5Q86YS7 1000 aa14.78□□□□□ -0.04
SRP54-201ENST00000216774 CREG2Q8IUH2 290 aa14.78□□□□□ -0.04
SRP54-201ENST00000216774 CDK5RAP3Q96JB5 506 aa14.78□□□□□ -0.04
SRP54-201ENST00000216774 BIN2Q9UBW5 565 aaPredicted RBP14.78□□□□□ -0.04
SRP54-201ENST00000216774 CDK5RAP2Q96SN8 1893 aa14.78□□□□□ -0.04
SRP54-201ENST00000216774 ZNF185O15231 689 aa14.78□□□□□ -0.04
SRP54-201ENST00000216774 PHACTR2O75167 634 aa14.78□□□□□ -0.04
SRP54-201ENST00000216774 PRPF6O94906 941 aaKnown RBP14.78□□□□□ -0.04
SRP54-201ENST00000216774 TEX11Q8IYF3 940 aa14.78□□□□□ -0.04
SRP54-201ENST00000216774 HPS3Q969F9 1004 aa14.78□□□□□ -0.04
SRP54-201ENST00000216774 CEP95Q96GE4 821 aa14.78□□□□□ -0.04
SRP54-201ENST00000216774 PNMA5Q96PV4 448 aa14.78□□□□□ -0.04
SRP54-201ENST00000216774 ALS2CR12Q96Q35 445 aa14.78□□□□□ -0.04
SRP54-201ENST00000216774 PLEKP08567 350 aaPredicted RBP14.77□□□□□ -0.04
SRP54-201ENST00000216774 TCP1P17987 556 aaKnown RBP14.77□□□□□ -0.04
SRP54-201ENST00000216774 KRT26Q7Z3Y9 468 aa14.77□□□□□ -0.04
SRP54-201ENST00000216774 AFAP1L1Q8TED9 768 aa14.77□□□□□ -0.04
SRP54-201ENST00000216774 RAD54LQ92698 747 aa14.77□□□□□ -0.04
SRP54-201ENST00000216774 CRACR2AQ9BSW2 395 aa14.77□□□□□ -0.04
SRP54-201ENST00000216774 SELENOOQ9BVL4 669 aa14.77□□□□□ -0.04
SRP54-201ENST00000216774 RIC8AQ9NPQ8 531 aa14.77□□□□□ -0.04
SRP54-201ENST00000216774 FAM207AQ9NSI2 230 aaPredicted RBP14.77□□□□□ -0.04
SRP54-201ENST00000216774 FAM184BQ9ULE4 1060 aa14.77□□□□□ -0.04
SRP54-201ENST00000216774 RTCBQ9Y3I0 505 aaKnown RBP14.77□□□□□ -0.04
SRP54-201ENST00000216774 PLIN4Q96Q06 1357 aa14.77□□□□□ -0.05
SRP54-201ENST00000216774 NKRFO15226 690 aaKnown RBP eCLIP14.77□□□□□ -0.05
SRP54-201ENST00000216774 EIF4A3P38919 411 aaKnown RBP14.77□□□□□ -0.05
SRP54-201ENST00000216774 ADCY7P51828 1080 aa14.77□□□□□ -0.05
SRP54-201ENST00000216774 EHHADHQ08426 723 aa14.77□□□□□ -0.05
SRP54-201ENST00000216774 PROM2Q8N271 834 aa14.77□□□□□ -0.05
SRP54-201ENST00000216774 FAM163AQ96GL9 167 aaPredicted RBP14.77□□□□□ -0.05
SRP54-201ENST00000216774 DEF6Q9H4E7 631 aa14.77□□□□□ -0.05
SRP54-201ENST00000216774 CAPN6Q9Y6Q1 641 aa14.77□□□□□ -0.05
SRP54-201ENST00000216774 EPHB6O15197 1021 aa14.76□□□□□ -0.05
SRP54-201ENST00000216774 PJA2O43164 708 aa14.76□□□□□ -0.05
SRP54-201ENST00000216774 AKR1B10O60218 316 aa14.76□□□□□ -0.05
SRP54-201ENST00000216774 C2orf54Q08AI8 447 aa14.76□□□□□ -0.05
SRP54-201ENST00000216774 NFIXQ14938 502 aa14.76□□□□□ -0.05
SRP54-201ENST00000216774 SEPT2Q15019 361 aa14.76□□□□□ -0.05
SRP54-201ENST00000216774 LRRC55Q6ZSA7 311 aa14.76□□□□□ -0.05
SRP54-201ENST00000216774 SLF2Q8IX21 1173 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms