RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 KCNMB3Q9NPA1 279 aa33.32■■■□□ 2.92
PABPN1-201ENST00000216727 PCDHA12Q9UN75 941 aa33.32■■■□□ 2.92
PABPN1-201ENST00000216727 ZNF280AP59817 542 aaPredicted RBP33.31■■■□□ 2.92
PABPN1-201ENST00000216727 TMEM119Q4V9L6 283 aa33.31■■■□□ 2.92
PABPN1-201ENST00000216727 KIAA1755Q5JYT7 1200 aa33.31■■■□□ 2.92
PABPN1-201ENST00000216727 SH2D4AQ9H788 454 aa33.31■■■□□ 2.92
PABPN1-201ENST00000216727 PPP1R2P41236 205 aa33.31■■■□□ 2.92
PABPN1-201ENST00000216727 USH1GQ495M9 461 aa33.31■■■□□ 2.92
PABPN1-201ENST00000216727 LARP4BQ92615 738 aaKnown RBP33.31■■■□□ 2.92
PABPN1-201ENST00000216727 PSDA5PKW4 1024 aaPredicted RBP33.3■■■□□ 2.92
PABPN1-201ENST00000216727 USP27XA6NNY8 438 aa33.3■■■□□ 2.92
PABPN1-201ENST00000216727 PSMA7O14818 248 aa33.3■■■□□ 2.92
PABPN1-201ENST00000216727 MARCH6O60337 910 aa33.3■■■□□ 2.92
PABPN1-201ENST00000216727 PLA2G6O60733 806 aa33.3■■■□□ 2.92
PABPN1-201ENST00000216727 RPS12P25398 132 aaKnown RBP33.3■■■□□ 2.92
PABPN1-201ENST00000216727 PBX1P40424 430 aa33.3■■■□□ 2.92
PABPN1-201ENST00000216727 ASIC1P78348 528 aa33.3■■■□□ 2.92
PABPN1-201ENST00000216727 DHTKD1Q96HY7 919 aaPredicted RBP33.3■■■□□ 2.92
PABPN1-201ENST00000216727 VCPKMTQ9H867 229 aa33.3■■■□□ 2.92
PABPN1-201ENST00000216727 EXOC1Q9NV70 894 aa33.3■■■□□ 2.92
PABPN1-201ENST00000216727 MAPK8IP1Q9UQF2 711 aa33.3■■■□□ 2.92
PABPN1-201ENST00000216727 SLC26A4O43511 780 aa33.29■■■□□ 2.92
PABPN1-201ENST00000216727 ARHGAP4P98171 946 aa33.29■■■□□ 2.92
PABPN1-201ENST00000216727 PTPN21Q16825 1174 aa33.29■■■□□ 2.92
PABPN1-201ENST00000216727 COBLL1Q53SF7 1204 aa33.29■■■□□ 2.92
PABPN1-201ENST00000216727 MIGA2Q7L4E1 593 aa33.29■■■□□ 2.92
PABPN1-201ENST00000216727 PIK3CDO00329 1044 aa33.29■■■□□ 2.92
PABPN1-201ENST00000216727 E4F1Q66K89 784 aaPredicted RBP33.29■■■□□ 2.92
PABPN1-201ENST00000216727 CNNM4Q6P4Q7 775 aa33.29■■■□□ 2.92
PABPN1-201ENST00000216727 NYAP1Q6ZVC0 841 aa33.29■■■□□ 2.92
PABPN1-201ENST00000216727 RAD54LQ92698 747 aa33.29■■■□□ 2.92
PABPN1-201ENST00000216727 P2RX7Q99572 595 aaKnown RBP33.29■■■□□ 2.92
PABPN1-201ENST00000216727 LRRC27Q9C0I9 530 aa33.29■■■□□ 2.92
PABPN1-201ENST00000216727 SPDYE3A6NKU9 549 aa33.28■■■□□ 2.92
PABPN1-201ENST00000216727 OPLAHO14841 1288 aa33.28■■■□□ 2.92
PABPN1-201ENST00000216727 TNNT1P13805 278 aa33.28■■■□□ 2.92
PABPN1-201ENST00000216727 SREBF1P36956 1147 aa33.28■■■□□ 2.92
PABPN1-201ENST00000216727 PDE4DQ08499 809 aa33.28■■■□□ 2.92
PABPN1-201ENST00000216727 HYIQ5T013 277 aa33.28■■■□□ 2.92
PABPN1-201ENST00000216727 FAM83BQ5T0W9 1011 aa33.28■■■□□ 2.92
PABPN1-201ENST00000216727 SLFN12Q8IYM2 578 aa33.28■■■□□ 2.92
PABPN1-201ENST00000216727 ANKRD20A12PQ8NF67 263 aa33.28■■■□□ 2.92
PABPN1-201ENST00000216727 MYRIPQ8NFW9 859 aa33.28■■■□□ 2.92
PABPN1-201ENST00000216727 CHURC1Q8WUH1 139 aa33.28■■■□□ 2.92
PABPN1-201ENST00000216727 NUDT12Q9BQG2 462 aa33.28■■■□□ 2.92
PABPN1-201ENST00000216727 UQCRHLA0A096LP55 91 aa33.28■■■□□ 2.92
PABPN1-201ENST00000216727 TEX33O43247 280 aa33.28■■■□□ 2.92
PABPN1-201ENST00000216727 UQCRHP07919 91 aa33.28■■■□□ 2.92
PABPN1-201ENST00000216727 KRT31Q15323 416 aa33.28■■■□□ 2.92
PABPN1-201ENST00000216727 TCP11X2Q5H9J9 407 aa33.28■■■□□ 2.92
PABPN1-201ENST00000216727 PVALEFA0A1B0GWK0 134 aa33.27■■■□□ 2.92
PABPN1-201ENST00000216727 ASNSP08243 561 aa33.27■■■□□ 2.92
PABPN1-201ENST00000216727 LTBP3Q9NS15 1303 aa33.27■■■□□ 2.92
PABPN1-201ENST00000216727 TBX3O15119 743 aa33.26■■■□□ 2.92
PABPN1-201ENST00000216727 COBLO75128 1261 aa33.26■■■□□ 2.92
PABPN1-201ENST00000216727 MCM6Q14566 821 aa33.26■■■□□ 2.92
PABPN1-201ENST00000216727 Q4G0T1 1027 aa33.26■■■□□ 2.92
PABPN1-201ENST00000216727 TC2NQ8N9U0 490 aa33.26■■■□□ 2.92
PABPN1-201ENST00000216727 CD2APQ9Y5K6 639 aa33.26■■■□□ 2.92
PABPN1-201ENST00000216727 KDM3AQ9Y4C1 1321 aa33.26■■■□□ 2.92
PABPN1-201ENST00000216727 HOXA7P31268 230 aaPredicted RBP33.26■■■□□ 2.91
PABPN1-201ENST00000216727 RANBP17Q9H2T7 1088 aaKnown RBP33.26■■■□□ 2.91
PABPN1-201ENST00000216727 SHTN1A0MZ66 631 aa33.25■■■□□ 2.91
PABPN1-201ENST00000216727 MYMKA6NI61 221 aa33.25■■■□□ 2.91
PABPN1-201ENST00000216727 KCNJ18B7U540 433 aa33.25■■■□□ 2.91
PABPN1-201ENST00000216727 TNFAIP1Q13829 316 aa33.25■■■□□ 2.91
PABPN1-201ENST00000216727 KCNJ12Q14500 433 aa33.25■■■□□ 2.91
PABPN1-201ENST00000216727 UNC13DQ70J99 1090 aa33.25■■■□□ 2.91
PABPN1-201ENST00000216727 TMEM139Q8IV31 216 aa33.25■■■□□ 2.91
PABPN1-201ENST00000216727 NT5C3AQ9H0P0 336 aa33.25■■■□□ 2.91
PABPN1-201ENST00000216727 CIITAP33076 1130 aa33.24■■■□□ 2.91
PABPN1-201ENST00000216727 RASA3Q14644 834 aa33.24■■■□□ 2.91
PABPN1-201ENST00000216727 PTPN14Q15678 1187 aa33.24■■■□□ 2.91
PABPN1-201ENST00000216727 TTI2Q6NXR4 508 aa33.24■■■□□ 2.91
PABPN1-201ENST00000216727 FAM160B2Q86V87 743 aa33.24■■■□□ 2.91
PABPN1-201ENST00000216727 NOC3LQ8WTT2 800 aaKnown RBP33.24■■■□□ 2.91
PABPN1-201ENST00000216727 THAP9Q9H5L6 903 aa33.24■■■□□ 2.91
PABPN1-201ENST00000216727 ITIH6Q6UXX5 1313 aa33.24■■■□□ 2.91
PABPN1-201ENST00000216727 PMS1P54277 932 aaKnown RBP33.24■■■□□ 2.91
PABPN1-201ENST00000216727 STK4Q13043 487 aa33.24■■■□□ 2.91
PABPN1-201ENST00000216727 TRMT1Q9NXH9 659 aaKnown RBP33.24■■■□□ 2.91
PABPN1-201ENST00000216727 TRIM49BA6NDI0 452 aa33.23■■■□□ 2.91
PABPN1-201ENST00000216727 COPB1P53618 953 aaKnown RBP33.23■■■□□ 2.91
PABPN1-201ENST00000216727 FCHSD1Q86WN1 690 aa33.23■■■□□ 2.91
PABPN1-201ENST00000216727 IRF2BP1Q8IU81 584 aa33.23■■■□□ 2.91
PABPN1-201ENST00000216727 ETNPPLQ8TBG4 499 aa33.23■■■□□ 2.91
PABPN1-201ENST00000216727 GJA10Q969M2 543 aa33.23■■■□□ 2.91
PABPN1-201ENST00000216727 BICDL2A1A5D9 508 aa33.23■■■□□ 2.91
PABPN1-201ENST00000216727 ARHGAP6O43182 974 aa33.23■■■□□ 2.91
PABPN1-201ENST00000216727 CCP110O43303 1012 aa33.23■■■□□ 2.91
PABPN1-201ENST00000216727 CCNE1P24864 410 aa33.23■■■□□ 2.91
PABPN1-201ENST00000216727 PPP1R1BQ9UD71 204 aaPredicted RBP33.23■■■□□ 2.91
PABPN1-201ENST00000216727 PHF20L1A8MW92 1017 aa33.22■■■□□ 2.91
PABPN1-201ENST00000216727 STX10O60499 249 aa33.22■■■□□ 2.91
PABPN1-201ENST00000216727 CYP3A4P08684 503 aa33.22■■■□□ 2.91
PABPN1-201ENST00000216727 EEF1GP26641 437 aaKnown RBP33.22■■■□□ 2.91
PABPN1-201ENST00000216727 GOLGA8FQ08AF8 430 aa33.22■■■□□ 2.91
PABPN1-201ENST00000216727 GOLGA8DPQ0D2H9 430 aa33.22■■■□□ 2.91
PABPN1-201ENST00000216727 ECM1Q16610 540 aa33.22■■■□□ 2.91
PABPN1-201ENST00000216727 KCNK18Q7Z418 384 aa33.22■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms