RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 MRPL46Q9H2W6 279 aaKnown RBP14.86□□□□□ -0.03
TGFBR3-201ENST00000212355 ATP8A2Q9NTI2 1148 aa14.86□□□□□ -0.03
TGFBR3-201ENST00000212355 TSKSQ9UJT2 592 aa14.86□□□□□ -0.03
TGFBR3-201ENST00000212355 NR2F2P24468 414 aa14.86□□□□□ -0.03
TGFBR3-201ENST00000212355 ETF1P62495 437 aaKnown RBP14.86□□□□□ -0.03
TGFBR3-201ENST00000212355 BRD3Q15059 726 aa14.86□□□□□ -0.03
TGFBR3-201ENST00000212355 PPP4R1Q8TF05 950 aa14.86□□□□□ -0.03
TGFBR3-201ENST00000212355 ZNF853P0CG23 659 aa14.86□□□□□ -0.03
TGFBR3-201ENST00000212355 MAP2K2P36507 400 aa14.86□□□□□ -0.03
TGFBR3-201ENST00000212355 ECE1P42892 770 aa14.86□□□□□ -0.03
TGFBR3-201ENST00000212355 TBCKQ8TEA7 893 aa14.86□□□□□ -0.03
TGFBR3-201ENST00000212355 SPDL1Q96EA4 605 aa14.86□□□□□ -0.03
TGFBR3-201ENST00000212355 MAGOHBQ96A72 148 aaKnown RBP14.86□□□□□ -0.03
TGFBR3-201ENST00000212355 TEKT3Q9BXF9 490 aa14.86□□□□□ -0.03
TGFBR3-201ENST00000212355 DNMT1P26358 1616 aaKnown RBP14.86□□□□□ -0.03
TGFBR3-201ENST00000212355 M0QZ92 97 aa14.86□□□□□ -0.03
TGFBR3-201ENST00000212355 CRKLP46109 303 aaKnown RBP14.86□□□□□ -0.03
TGFBR3-201ENST00000212355 TCP11Q8WWU5 503 aa14.86□□□□□ -0.03
TGFBR3-201ENST00000212355 GBP5Q96PP8 586 aa14.86□□□□□ -0.03
TGFBR3-201ENST00000212355 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.86□□□□□ -0.03
TGFBR3-201ENST00000212355 ZNF500O60304 480 aaPredicted RBP14.85□□□□□ -0.03
TGFBR3-201ENST00000212355 EEF1GP26641 437 aaKnown RBP14.85□□□□□ -0.03
TGFBR3-201ENST00000212355 FAM26FQ5R3K3 315 aa14.85□□□□□ -0.03
TGFBR3-201ENST00000212355 TM6SF1Q9BZW5 370 aa14.85□□□□□ -0.03
TGFBR3-201ENST00000212355 RIC8AQ9NPQ8 531 aa14.85□□□□□ -0.03
TGFBR3-201ENST00000212355 GNA14O95837 355 aa14.85□□□□□ -0.03
TGFBR3-201ENST00000212355 OSBP2Q969R2 916 aa14.85□□□□□ -0.03
TGFBR3-201ENST00000212355 DACT3Q96B18 629 aaPredicted RBP14.85□□□□□ -0.03
TGFBR3-201ENST00000212355 LRCH2Q5VUJ6 765 aa14.85□□□□□ -0.03
TGFBR3-201ENST00000212355 SPATA17Q96L03 361 aa14.85□□□□□ -0.03
TGFBR3-201ENST00000212355 ARPP19P56211 112 aa14.85□□□□□ -0.03
TGFBR3-201ENST00000212355 ZNF577Q9BSK1 485 aa14.85□□□□□ -0.03
TGFBR3-201ENST00000212355 MAGI2Q86UL8 1455 aa14.85□□□□□ -0.03
TGFBR3-201ENST00000212355 TNNC2P02585 160 aa14.85□□□□□ -0.03
TGFBR3-201ENST00000212355 LTKP29376 864 aa14.85□□□□□ -0.03
TGFBR3-201ENST00000212355 CACNB3P54284 484 aa14.85□□□□□ -0.03
TGFBR3-201ENST00000212355 LGSNQ5TDP6 509 aa14.85□□□□□ -0.03
TGFBR3-201ENST00000212355 TOGARAM2Q6ZUX3 1019 aa14.85□□□□□ -0.03
TGFBR3-201ENST00000212355 ANLNQ9NQW6 1124 aa14.85□□□□□ -0.03
TGFBR3-201ENST00000212355 KIF3CO14782 793 aa14.84□□□□□ -0.03
TGFBR3-201ENST00000212355 RASSF2P50749 326 aa14.84□□□□□ -0.03
TGFBR3-201ENST00000212355 HP1BP3Q5SSJ5 553 aaPredicted RBP14.84□□□□□ -0.03
TGFBR3-201ENST00000212355 MYLK4Q86YV6 388 aaPredicted RBP14.84□□□□□ -0.03
TGFBR3-201ENST00000212355 UBE2TQ9NPD8 197 aaPredicted RBP14.84□□□□□ -0.03
TGFBR3-201ENST00000212355 AKT3Q9Y243 479 aa14.84□□□□□ -0.03
TGFBR3-201ENST00000212355 H7C1D1 291 aa14.84□□□□□ -0.03
TGFBR3-201ENST00000212355 HEXIM1O94992 359 aaKnown RBP14.84□□□□□ -0.03
TGFBR3-201ENST00000212355 PLEKHA8P1O95397 391 aa14.84□□□□□ -0.03
TGFBR3-201ENST00000212355 FMNL1O95466 1100 aaPredicted RBP14.84□□□□□ -0.03
TGFBR3-201ENST00000212355 COG7P83436 770 aa14.84□□□□□ -0.03
TGFBR3-201ENST00000212355 RBBP5Q15291 538 aaKnown RBP14.84□□□□□ -0.03
TGFBR3-201ENST00000212355 TMEM191BP0C7N4 346 aa14.84□□□□□ -0.03
TGFBR3-201ENST00000212355 ABCB5Q2M3G0 1257 aa14.84□□□□□ -0.03
TGFBR3-201ENST00000212355 HDAC11Q96DB2 347 aa14.84□□□□□ -0.03
TGFBR3-201ENST00000212355 TCOF1Q13428 1488 aaKnown RBP14.84□□□□□ -0.03
TGFBR3-201ENST00000212355 APOA5Q6Q788 366 aa14.84□□□□□ -0.03
TGFBR3-201ENST00000212355 ARHGAP27Q6ZUM4 889 aa14.84□□□□□ -0.03
TGFBR3-201ENST00000212355 AFAP1L2Q8N4X5 818 aa14.84□□□□□ -0.03
TGFBR3-201ENST00000212355 ZBTB1Q9Y2K1 713 aa14.84□□□□□ -0.03
TGFBR3-201ENST00000212355 CTTNQ14247 550 aaKnown RBP14.84□□□□□ -0.03
TGFBR3-201ENST00000212355 MMEL1Q495T6 779 aa14.84□□□□□ -0.03
TGFBR3-201ENST00000212355 ZNF668Q96K58 619 aaPredicted RBP14.84□□□□□ -0.03
TGFBR3-201ENST00000212355 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.84□□□□□ -0.03
TGFBR3-201ENST00000212355 YEATS2Q9ULM3 1422 aa14.83□□□□□ -0.03
TGFBR3-201ENST00000212355 ZNF804BA4D1E1 1349 aa14.83□□□□□ -0.03
TGFBR3-201ENST00000212355 HNRNPDLO14979 420 aaKnown RBP14.83□□□□□ -0.03
TGFBR3-201ENST00000212355 SIRT2Q8IXJ6 389 aa14.83□□□□□ -0.03
TGFBR3-201ENST00000212355 SYNE4Q8N205 404 aa14.83□□□□□ -0.03
TGFBR3-201ENST00000212355 C7orf31Q8N865 590 aa14.83□□□□□ -0.03
TGFBR3-201ENST00000212355 PDZD8Q8NEN9 1154 aa14.83□□□□□ -0.03
TGFBR3-201ENST00000212355 LRRC8CQ8TDW0 803 aa14.83□□□□□ -0.03
TGFBR3-201ENST00000212355 STAG1Q8WVM7 1258 aa14.83□□□□□ -0.03
TGFBR3-201ENST00000212355 MAP4K1Q92918 833 aa14.83□□□□□ -0.03
TGFBR3-201ENST00000212355 NHEJ1Q9H9Q4 299 aaPredicted RBP14.83□□□□□ -0.03
TGFBR3-201ENST00000212355 NXF1Q9UBU9 619 aaKnown RBP14.83□□□□□ -0.03
TGFBR3-201ENST00000212355 NAA30Q147X3 362 aaPredicted RBP14.83□□□□□ -0.04
TGFBR3-201ENST00000212355 JADE1Q6IE81 842 aa14.83□□□□□ -0.04
TGFBR3-201ENST00000212355 ATP2A3Q93084 1043 aa14.83□□□□□ -0.04
TGFBR3-201ENST00000212355 TRIM49BA6NDI0 452 aa14.83□□□□□ -0.04
TGFBR3-201ENST00000212355 NMT2O60551 498 aa14.83□□□□□ -0.04
TGFBR3-201ENST00000212355 SMIM24O75264 130 aa14.83□□□□□ -0.04
TGFBR3-201ENST00000212355 BIRC2Q13490 618 aa14.83□□□□□ -0.04
TGFBR3-201ENST00000212355 CDO1Q16878 200 aa14.83□□□□□ -0.04
TGFBR3-201ENST00000212355 FBXO18Q8NFZ0 1043 aa14.83□□□□□ -0.04
TGFBR3-201ENST00000212355 ZSWIM5Q9P217 1185 aa14.83□□□□□ -0.04
TGFBR3-201ENST00000212355 PCDHA4Q9UN74 947 aa14.83□□□□□ -0.04
TGFBR3-201ENST00000212355 KIF21AQ7Z4S6 1674 aa14.83□□□□□ -0.04
TGFBR3-201ENST00000212355 OATP04181 439 aa14.83□□□□□ -0.04
TGFBR3-201ENST00000212355 KMT5BQ4FZB7 885 aa14.83□□□□□ -0.04
TGFBR3-201ENST00000212355 LARP4BQ92615 738 aaKnown RBP14.83□□□□□ -0.04
TGFBR3-201ENST00000212355 PARP2Q9UGN5 583 aa14.83□□□□□ -0.04
TGFBR3-201ENST00000212355 TMTC4Q5T4D3 741 aa14.83□□□□□ -0.04
TGFBR3-201ENST00000212355 SRGAP1Q7Z6B7 1085 aa14.83□□□□□ -0.04
TGFBR3-201ENST00000212355 CXorf38Q8TB03 319 aa14.83□□□□□ -0.04
TGFBR3-201ENST00000212355 PARD6BQ9BYG5 372 aa14.83□□□□□ -0.04
TGFBR3-201ENST00000212355 E2F4Q16254 413 aa14.82□□□□□ -0.04
TGFBR3-201ENST00000212355 SLFN12Q8IYM2 578 aa14.82□□□□□ -0.04
TGFBR3-201ENST00000212355 CCNYQ8ND76 341 aa14.82□□□□□ -0.04
TGFBR3-201ENST00000212355 CHMP6Q96FZ7 201 aa14.82□□□□□ -0.04
TGFBR3-201ENST00000212355 TEX14Q8IWB6 1497 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms