RNA–Protein interactions for RNA: ENST00000191018.9

CTSA-201, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-201ENST00000191018 APOBEC3FQ8IUX4 373 aaKnown RBP20.9■□□□□ 0.94
CTSA-201ENST00000191018 KIAA1524Q8TCG1 905 aa20.9■□□□□ 0.94
CTSA-201ENST00000191018 CACTINQ8WUQ7 758 aaKnown RBP20.9■□□□□ 0.94
CTSA-201ENST00000191018 C7orf25Q9BPX7 421 aa20.9■□□□□ 0.94
CTSA-201ENST00000191018 TRIM9Q9C026 710 aa20.9■□□□□ 0.94
CTSA-201ENST00000191018 BLOC1S4Q9NUP1 217 aa20.9■□□□□ 0.94
CTSA-201ENST00000191018 FBXO28Q9NVF7 368 aa20.9■□□□□ 0.94
CTSA-201ENST00000191018 ZNF112Q9UJU3 913 aa20.9■□□□□ 0.94
CTSA-201ENST00000191018 PCDHA12Q9UN75 941 aa20.9■□□□□ 0.94
CTSA-201ENST00000191018 WDR46O15213 610 aaKnown RBP20.9■□□□□ 0.94
CTSA-201ENST00000191018 RHOBTB3O94955 611 aa20.9■□□□□ 0.94
CTSA-201ENST00000191018 SERPINC1P01008 464 aa20.9■□□□□ 0.94
CTSA-201ENST00000191018 Q4G0T1 1027 aa20.9■□□□□ 0.94
CTSA-201ENST00000191018 ANGEL2Q5VTE6 544 aaKnown RBP20.9■□□□□ 0.94
CTSA-201ENST00000191018 DCAF15Q66K64 600 aa20.9■□□□□ 0.94
CTSA-201ENST00000191018 TRPM4Q8TD43 1214 aa20.9■□□□□ 0.94
CTSA-201ENST00000191018 PYCARDQ9ULZ3 195 aa20.9■□□□□ 0.94
CTSA-201ENST00000191018 TBX3O15119 743 aa20.89■□□□□ 0.93
CTSA-201ENST00000191018 CYP3A4P08684 503 aa20.89■□□□□ 0.93
CTSA-201ENST00000191018 INPP5BP32019 993 aa20.89■□□□□ 0.93
CTSA-201ENST00000191018 LRMPQ12912 555 aa20.89■□□□□ 0.93
CTSA-201ENST00000191018 KMT5BQ4FZB7 885 aa20.89■□□□□ 0.93
CTSA-201ENST00000191018 TMEM119Q4V9L6 283 aa20.89■□□□□ 0.93
CTSA-201ENST00000191018 KRT79Q5XKE5 535 aa20.89■□□□□ 0.93
CTSA-201ENST00000191018 KLHL10Q6JEL2 608 aa20.89■□□□□ 0.93
CTSA-201ENST00000191018 CCDC174Q6PII3 467 aa20.89■□□□□ 0.93
CTSA-201ENST00000191018 LRRC8AQ8IWT6 810 aa20.89■□□□□ 0.93
CTSA-201ENST00000191018 NUDT12Q9BQG2 462 aa20.89■□□□□ 0.93
CTSA-201ENST00000191018 SAMSN1Q9NSI8 373 aaKnown RBP20.89■□□□□ 0.93
CTSA-201ENST00000191018 PARP14Q460N5 1801 aa20.88■□□□□ 0.93
CTSA-201ENST00000191018 HOXA13P31271 388 aaPredicted RBP20.88■□□□□ 0.93
CTSA-201ENST00000191018 HYIQ5T013 277 aa20.88■□□□□ 0.93
CTSA-201ENST00000191018 FILIP1Q7Z7B0 1213 aa20.88■□□□□ 0.93
CTSA-201ENST00000191018 SLFN12Q8IYM2 578 aa20.88■□□□□ 0.93
CTSA-201ENST00000191018 ETNPPLQ8TBG4 499 aa20.88■□□□□ 0.93
CTSA-201ENST00000191018 SNX29Q8TEQ0 813 aa20.88■□□□□ 0.93
CTSA-201ENST00000191018 LENG9Q96B70 501 aa20.88■□□□□ 0.93
CTSA-201ENST00000191018 NAP1L5Q96NT1 182 aaPredicted RBP20.88■□□□□ 0.93
CTSA-201ENST00000191018 GSDMDP57764 484 aa20.88■□□□□ 0.93
CTSA-201ENST00000191018 AMPD3Q01432 767 aa20.88■□□□□ 0.93
CTSA-201ENST00000191018 GJA10Q969M2 543 aa20.88■□□□□ 0.93
CTSA-201ENST00000191018 HOOK2Q96ED9 719 aa20.88■□□□□ 0.93
CTSA-201ENST00000191018 FHDC1Q9C0D6 1143 aaPredicted RBP20.88■□□□□ 0.93
CTSA-201ENST00000191018 RWDD2AQ9UIY3 292 aa20.88■□□□□ 0.93
CTSA-201ENST00000191018 GDAQ9Y2T3 454 aa20.88■□□□□ 0.93
CTSA-201ENST00000191018 MRPL11Q9Y3B7 192 aaKnown RBP20.88■□□□□ 0.93
CTSA-201ENST00000191018 ABCB11O95342 1321 aa20.87■□□□□ 0.93
CTSA-201ENST00000191018 PHIPQ8WWQ0 1821 aa20.87■□□□□ 0.93
CTSA-201ENST00000191018 MARCH6O60337 910 aa20.87■□□□□ 0.93
CTSA-201ENST00000191018 STX17P56962 302 aa20.87■□□□□ 0.93
CTSA-201ENST00000191018 CDKAL1Q5VV42 579 aa20.87■□□□□ 0.93
CTSA-201ENST00000191018 LDHDQ86WU2 507 aa20.87■□□□□ 0.93
CTSA-201ENST00000191018 INTS13Q9NVM9 706 aa20.87■□□□□ 0.93
CTSA-201ENST00000191018 FAM86B1E9PN63 330 aa20.86■□□□□ 0.93
CTSA-201ENST00000191018 SLC26A4O43511 780 aa20.86■□□□□ 0.93
CTSA-201ENST00000191018 FAM86B2P0C5J1 330 aa20.86■□□□□ 0.93
CTSA-201ENST00000191018 PRCPP42785 496 aa20.86■□□□□ 0.93
CTSA-201ENST00000191018 ARID5BQ14865 1188 aa20.86■□□□□ 0.93
CTSA-201ENST00000191018 TMC6Q7Z403 805 aa20.86■□□□□ 0.93
CTSA-201ENST00000191018 SCYL3Q8IZE3 742 aa20.86■□□□□ 0.93
CTSA-201ENST00000191018 ADSSL1Q8N142 457 aa20.86■□□□□ 0.93
CTSA-201ENST00000191018 PRPF38AQ8NAV1 312 aaKnown RBP20.86■□□□□ 0.93
CTSA-201ENST00000191018 GIMAP8Q8ND71 665 aaPredicted RBP20.86■□□□□ 0.93
CTSA-201ENST00000191018 TBC1D5Q92609 795 aa20.86■□□□□ 0.93
CTSA-201ENST00000191018 LARP4BQ92615 738 aaKnown RBP20.86■□□□□ 0.93
CTSA-201ENST00000191018 CDK5RAP3Q96JB5 506 aa20.86■□□□□ 0.93
CTSA-201ENST00000191018 SPTLC3Q9NUV7 552 aa20.86■□□□□ 0.93
CTSA-201ENST00000191018 CTNND2Q9UQB3 1225 aa20.86■□□□□ 0.93
CTSA-201ENST00000191018 ZNF536O15090 1300 aa20.86■□□□□ 0.93
CTSA-201ENST00000191018 GCOM1H8Y6P7 765 aaPredicted RBP20.86■□□□□ 0.93
CTSA-201ENST00000191018 CFBP00751 764 aa20.86■□□□□ 0.93
CTSA-201ENST00000191018 ICAM1P05362 532 aa20.86■□□□□ 0.93
CTSA-201ENST00000191018 POLR2MP0CAP2 368 aa20.86■□□□□ 0.93
CTSA-201ENST00000191018 HIRAP54198 1017 aaPredicted RBP20.86■□□□□ 0.93
CTSA-201ENST00000191018 PAK1Q13153 545 aa20.86■□□□□ 0.93
CTSA-201ENST00000191018 NOLC1Q14978 699 aaKnown RBP eCLIP20.86■□□□□ 0.939e-12■■□□□ 12.5
CTSA-201ENST00000191018 PRR16Q569H4 304 aa20.86■□□□□ 0.93
CTSA-201ENST00000191018 HSP90AA4PQ58FG1 418 aa20.86■□□□□ 0.93
CTSA-201ENST00000191018 SV2BQ7L1I2 683 aa20.86■□□□□ 0.93
CTSA-201ENST00000191018 APTXQ7Z2E3 356 aaKnown RBP20.86■□□□□ 0.93
CTSA-201ENST00000191018 RAD54LQ92698 747 aa20.86■□□□□ 0.93
CTSA-201ENST00000191018 SLF1Q9BQI6 1058 aa20.86■□□□□ 0.93
CTSA-201ENST00000191018 WDR18Q9BV38 432 aa20.86■□□□□ 0.93
CTSA-201ENST00000191018 PPP2R3BQ9Y5P8 575 aa20.86■□□□□ 0.93
CTSA-201ENST00000191018 OFD1O75665 1012 aa20.85■□□□□ 0.93
CTSA-201ENST00000191018 CDK11BP21127 795 aaKnown RBP20.85■□□□□ 0.93
CTSA-201ENST00000191018 EPS15P42566 896 aa20.85■□□□□ 0.93
CTSA-201ENST00000191018 SPIRE1Q08AE8 756 aa20.85■□□□□ 0.93
CTSA-201ENST00000191018 ECM1Q16610 540 aa20.85■□□□□ 0.93
CTSA-201ENST00000191018 CNNM4Q6P4Q7 775 aa20.85■□□□□ 0.93
CTSA-201ENST00000191018 VSTM4Q8IW00 320 aa20.85■□□□□ 0.93
CTSA-201ENST00000191018 EMILIN3Q9NT22 766 aa20.85■□□□□ 0.93
CTSA-201ENST00000191018 GGA3Q9NZ52 723 aa20.85■□□□□ 0.93
CTSA-201ENST00000191018 POLR2AP24928 1970 aaKnown RBP20.85■□□□□ 0.93
CTSA-201ENST00000191018 KDM3AQ9Y4C1 1321 aa20.85■□□□□ 0.93
CTSA-201ENST00000191018 MCM6Q14566 821 aa20.84■□□□□ 0.93
CTSA-201ENST00000191018 KCNK18Q7Z418 384 aa20.84■□□□□ 0.93
CTSA-201ENST00000191018 FAM20AQ96MK3 541 aa20.84■□□□□ 0.93
CTSA-201ENST00000191018 SSC5DA1L4H1 1573 aa20.84■□□□□ 0.93
CTSA-201ENST00000191018 UTRNP46939 3433 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms