RNA–Protein interactions for RNA: ENSMUST00000171158.7

Sdc1-205, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 2,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-205ENSMUST00000171158 Gm1993A6X8I0 212 aa17.39■□□□□ 0.37
Sdc1-205ENSMUST00000171158 SlxD3Z347 212 aa17.39■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Kifc2O08672 792 aa17.39■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Snx12O70493 165 aa17.39■□□□□ 0.37
Sdc1-205ENSMUST00000171158 PtgdrP70263 357 aa17.39■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Rtel1Q0VGM9 1203 aa17.39■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Dok7Q18PE0 504 aa17.39■□□□□ 0.37
Sdc1-205ENSMUST00000171158 1810065E05RikQ5NC41 235 aa17.39■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Hirip3Q8BLH7 601 aa17.39■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Ndst4Q9EQW8 872 aa17.39■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Zfp646Q6NV66 1788 aa17.39■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Hnrnph3D3Z3N4 346 aaKnown RBP17.38■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Top1Q04750 767 aaKnown RBP17.38■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Oxr1Q4KMM3 866 aa17.38■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Trpc6Q61143 930 aa17.38■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Irak1Q62406 710 aa17.38■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Krt222Q8CCX5 294 aa17.38■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Sar1bQ9CQC9 198 aa17.38■□□□□ 0.37
Sdc1-205ENSMUST00000171158 AacsQ9D2R0 672 aa17.38■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Klra17Q9JMA4 273 aa17.38■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Ccnt1Q9QWV9 724 aaKnown RBP17.38■□□□□ 0.37
Sdc1-205ENSMUST00000171158 1700003F12RikA2AKE5 210 aa17.38■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Fdx1P46656 188 aa17.38■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Nell2Q61220 819 aa17.38■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Mettl25Q6NXH8 597 aa17.38■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Lrrc1Q80VQ1 524 aa17.38■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Drd5Q8BLD9 478 aa17.38■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Srgap2Q91Z67 1071 aa17.38■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Plagl2Q925T4 496 aa17.38■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Prc1Q99K43 603 aaKnown RBP17.38■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Prdm11A2AGX3 565 aa17.37■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Setd4P58467 439 aa17.37■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Sap30bpQ02614 308 aa17.37■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Rasa3Q60790 834 aa17.37■□□□□ 0.37
Sdc1-205ENSMUST00000171158 MmeQ61391 750 aa17.37■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Ccdc93Q7TQK5 629 aa17.37■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Lmbrd1Q8K0B2 537 aa17.37■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Cul5Q9D5V5 780 aa17.37■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Gm11983V9GXS8 105 aa17.37■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Lcmt1A0A0U1RNF2 332 aa17.37■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Arhgap4B1AUY3 965 aa17.37■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Pdrg1P59048 133 aa17.37■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Ppp1r11Q8K1L5 131 aa17.37■□□□□ 0.37
Sdc1-205ENSMUST00000171158 EpgnQ924X1 152 aa17.37■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Ccdc105Q9D4K7 499 aa17.37■□□□□ 0.37
Sdc1-205ENSMUST00000171158 EcsitQ9QZH6 435 aa17.37■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Psma7Q9Z2U0 248 aa17.37■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Usp17lbE9Q9U0 468 aa17.36■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Rgs22G3UYX5 1258 aa17.36■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Mx1P09922 631 aa17.36■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Tubb5P99024 444 aaKnown RBP17.36■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Fhdc1Q3ULZ2 1149 aa17.36■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Kctd1Q5M956 257 aa17.36■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Stxbp3Q60770 592 aa17.36■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Thap3Q8BJ25 218 aa17.36■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Rcor2Q8C796 523 aa17.36■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Ccdc73Q8CDM4 1066 aa17.36■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Vmn1r218Q8R261 298 aa17.36■□□□□ 0.37
Sdc1-205ENSMUST00000171158 ToporslQ9D2F8 683 aa17.36■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Knop1Q9Z2Q2 478 aaKnown RBP17.36■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Gm4985A2ALC6 410 aa17.36■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Nck2O55033 380 aa17.36■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Lig1P37913 916 aa17.36■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Nf2P46662 596 aa17.36■□□□□ 0.37
Sdc1-205ENSMUST00000171158 NeblQ0II04 452 aa17.36■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Atp8b1Q148W0 1251 aa17.36■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Ccdc57Q6PHN1 1016 aa17.36■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Lrrc41Q8K1C9 807 aa17.36■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Rpf2Q9JJ80 306 aaKnown RBP17.36■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Mtcl1Q3UHU5 1945 aa17.35■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Col5a2Q3U962 1497 aa17.35■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Plxnb2B2RXS4 1842 aa17.35■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Carmil2Q3V3V9 1296 aa17.35■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Lrrcc1Q69ZB0 1026 aa17.35■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Antxr2Q6DFX2 487 aa17.35■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Hook2Q7TMK6 716 aa17.35■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Ankrd24Q80VM7 985 aa17.35■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Znf18Q810A1 556 aa17.35■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Kbtbd4Q8R179 534 aa17.35■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Psmd2Q8VDM4 908 aa17.35■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Gtpbp4Q99ME9 634 aaKnown RBP17.35■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Hsd3b7Q9EQC1 369 aa17.35■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Asic3Q6X1Y6 530 aa17.35■□□□□ 0.37
Sdc1-205ENSMUST00000171158 PodnQ7TQ62 611 aa17.35■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Gpt2Q8BGT5 522 aa17.35■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Armcx3Q8BHS6 379 aa17.35■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Gpcpd1Q8C0L9 675 aa17.35■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Saal1Q9D2C2 474 aa17.35■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Dock2Q8C3J5 1828 aa17.34■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Nrxn2E9Q7X7 1710 aa17.34■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Enc1O35709 589 aa17.34■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Nedd4P46935 887 aaKnown RBP17.34■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Islr2Q5RKR3 745 aa17.34■□□□□ 0.37
Sdc1-205ENSMUST00000171158 EregQ61521 162 aa17.34■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Fam196bQ6GQV1 535 aa17.34■□□□□ 0.37
Sdc1-205ENSMUST00000171158 PigsQ6PD26 555 aaKnown RBP17.34■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Atp2b4Q6Q477 1205 aa17.34■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Ces1Q8VCC2 565 aa17.34■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Smtnl1Q99LM3 459 aa17.34■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Fam114a1Q9D281 569 aa17.34■□□□□ 0.37
Retrieved 100 of 22,080 RNA–protein pairs in 57.5 ms