RNA–Protein interactions for RNA: ENSMUST00000109578.7

Vps54-202, Transcript of Vacuolar protein sorting-associated protein 54, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Vps54, Length 4,273 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54-202ENSMUST00000109578 Lrrfip1Q3UZ39 729 aaKnown RBP12.75□□□□□ -0.37
Vps54-202ENSMUST00000109578 Atxn2lQ7TQH0 1049 aaKnown RBP12.75□□□□□ -0.37
Vps54-202ENSMUST00000109578 KhnynQ80U38 671 aa12.75□□□□□ -0.37
Vps54-202ENSMUST00000109578 Mrpl12Q9DB15 201 aaKnown RBP12.75□□□□□ -0.37
Vps54-202ENSMUST00000109578 Arfgef1G3X9K3 1846 aaKnown RBP12.75□□□□□ -0.37
Vps54-202ENSMUST00000109578 Lig1P37913 916 aa12.75□□□□□ -0.37
Vps54-202ENSMUST00000109578 Akr1b1P45376 316 aa12.75□□□□□ -0.37
Vps54-202ENSMUST00000109578 Rasa2P58069 847 aa12.75□□□□□ -0.37
Vps54-202ENSMUST00000109578 Tubb5P99024 444 aaKnown RBP12.75□□□□□ -0.37
Vps54-202ENSMUST00000109578 Tmtc1Q3UV71 942 aa12.75□□□□□ -0.37
Vps54-202ENSMUST00000109578 Sdad1Q80UZ2 687 aaKnown RBP12.75□□□□□ -0.37
Vps54-202ENSMUST00000109578 Dnajc19Q9CQV7 116 aa12.75□□□□□ -0.37
Vps54-202ENSMUST00000109578 Ccdc43Q9CR29 222 aaKnown RBP12.75□□□□□ -0.37
Vps54-202ENSMUST00000109578 Dydc2Q9D3X8 139 aa12.75□□□□□ -0.37
Vps54-202ENSMUST00000109578 Sycp1Q62209 993 aa12.75□□□□□ -0.37
Vps54-202ENSMUST00000109578 Pip5kl1Q6U7H8 395 aa12.75□□□□□ -0.37
Vps54-202ENSMUST00000109578 Ccdc172Q810N9 267 aa12.75□□□□□ -0.37
Vps54-202ENSMUST00000109578 TbcbQ9D1E6 244 aa12.75□□□□□ -0.37
Vps54-202ENSMUST00000109578 Nap1l2P51860 460 aa12.74□□□□□ -0.37
Vps54-202ENSMUST00000109578 Hps5P59438 1126 aa12.74□□□□□ -0.37
Vps54-202ENSMUST00000109578 Ppp4cP97470 307 aa12.74□□□□□ -0.37
Vps54-202ENSMUST00000109578 Wdr70Q3TWF6 657 aa12.74□□□□□ -0.37
Vps54-202ENSMUST00000109578 Ppp1r7Q3UM45 361 aa12.74□□□□□ -0.37
Vps54-202ENSMUST00000109578 Kif22Q3V300 660 aa12.74□□□□□ -0.37
Vps54-202ENSMUST00000109578 Hook2Q7TMK6 716 aa12.74□□□□□ -0.37
Vps54-202ENSMUST00000109578 Maip1Q8BHE8 291 aa12.74□□□□□ -0.37
Vps54-202ENSMUST00000109578 Sgsm1Q8BPQ7 1093 aa12.74□□□□□ -0.37
Vps54-202ENSMUST00000109578 Morc2bQ8C5W4 1022 aa12.74□□□□□ -0.37
Vps54-202ENSMUST00000109578 Prl7b1Q8CGZ9 251 aa12.74□□□□□ -0.37
Vps54-202ENSMUST00000109578 Parp10Q8CIE4 960 aa12.74□□□□□ -0.37
Vps54-202ENSMUST00000109578 Slfn1Q9Z0I7 337 aa12.74□□□□□ -0.37
Vps54-202ENSMUST00000109578 Sdccag8Q80UF4 717 aa12.74□□□□□ -0.37
Vps54-202ENSMUST00000109578 Kctd10Q922M3 315 aa12.74□□□□□ -0.37
Vps54-202ENSMUST00000109578 Akap8Q9DBR0 687 aaKnown RBP12.74□□□□□ -0.37
Vps54-202ENSMUST00000109578 Klrc1Q9Z202 244 aa12.74□□□□□ -0.37
Vps54-202ENSMUST00000109578 Akap2O54931 893 aa12.74□□□□□ -0.37
Vps54-202ENSMUST00000109578 Grem2O88273 168 aa12.74□□□□□ -0.37
Vps54-202ENSMUST00000109578 Nedd4P46935 887 aaKnown RBP12.74□□□□□ -0.37
Vps54-202ENSMUST00000109578 PtgdrP70263 357 aa12.74□□□□□ -0.37
Vps54-202ENSMUST00000109578 Gngt1Q61012 74 aa12.74□□□□□ -0.37
Vps54-202ENSMUST00000109578 Ccdc96Q9CR92 584 aa12.74□□□□□ -0.37
Vps54-202ENSMUST00000109578 UvssaQ9D479 717 aa12.74□□□□□ -0.37
Vps54-202ENSMUST00000109578 Odf2A3KGV1 830 aaKnown RBP12.74□□□□□ -0.37
Vps54-202ENSMUST00000109578 Folh1O35409 752 aa12.74□□□□□ -0.37
Vps54-202ENSMUST00000109578 Klra1P20937 262 aa12.74□□□□□ -0.37
Vps54-202ENSMUST00000109578 Gdf10P97737 476 aa12.74□□□□□ -0.37
Vps54-202ENSMUST00000109578 Tmed8Q3UHI4 326 aa12.74□□□□□ -0.37
Vps54-202ENSMUST00000109578 Ttbk2Q3UVR3 1243 aa12.74□□□□□ -0.37
Vps54-202ENSMUST00000109578 Pde1cQ64338 706 aa12.74□□□□□ -0.37
Vps54-202ENSMUST00000109578 RtcbQ99LF4 505 aaKnown RBP12.74□□□□□ -0.37
Vps54-202ENSMUST00000109578 Ears2Q9CXJ1 523 aa12.74□□□□□ -0.37
Vps54-202ENSMUST00000109578 Rwdd2aQ9D9S3 292 aa12.74□□□□□ -0.37
Vps54-202ENSMUST00000109578 Cmtr1Q9DBC3 837 aa12.74□□□□□ -0.37
Vps54-202ENSMUST00000109578 Sec24cG3X972 1096 aaKnown RBP12.73□□□□□ -0.37
Vps54-202ENSMUST00000109578 Kcnma1Q08460 1209 aa12.73□□□□□ -0.37
Vps54-202ENSMUST00000109578 Clca4aQ6Q473 924 aa12.73□□□□□ -0.37
Vps54-202ENSMUST00000109578 Haus4Q8BFT2 363 aa12.73□□□□□ -0.37
Vps54-202ENSMUST00000109578 Vipas39Q8BGQ1 491 aa12.73□□□□□ -0.37
Vps54-202ENSMUST00000109578 Hirip3Q8BLH7 601 aa12.73□□□□□ -0.37
Vps54-202ENSMUST00000109578 Ces1Q8VCC2 565 aa12.73□□□□□ -0.37
Vps54-202ENSMUST00000109578 Lzts2Q91YU6 671 aa12.73□□□□□ -0.37
Vps54-202ENSMUST00000109578 Ccnt1Q9QWV9 724 aaKnown RBP12.73□□□□□ -0.37
Vps54-202ENSMUST00000109578 Ppp2r3dQ9Z176 491 aa12.73□□□□□ -0.37
Vps54-202ENSMUST00000109578 Fer1l6E0CZ42 1862 aa12.73□□□□□ -0.37
Vps54-202ENSMUST00000109578 Ap1g2O88512 791 aa12.73□□□□□ -0.37
Vps54-202ENSMUST00000109578 Wee1P47810 646 aa12.73□□□□□ -0.37
Vps54-202ENSMUST00000109578 Tlr13Q6R5N8 991 aa12.73□□□□□ -0.37
Vps54-202ENSMUST00000109578 Camsap3Q80VC9 1252 aa12.73□□□□□ -0.37
Vps54-202ENSMUST00000109578 Slc13a4Q8BZ82 625 aa12.73□□□□□ -0.37
Vps54-202ENSMUST00000109578 Ubxn6Q99PL6 442 aa12.73□□□□□ -0.37
Vps54-202ENSMUST00000109578 Rsbn1lD3Z0K6 821 aa12.73□□□□□ -0.37
Vps54-202ENSMUST00000109578 Gucy1b3O54865 620 aa12.73□□□□□ -0.37
Vps54-202ENSMUST00000109578 Copb2O55029 905 aa12.73□□□□□ -0.37
Vps54-202ENSMUST00000109578 Slc2a13Q3UHK1 637 aa12.73□□□□□ -0.37
Vps54-202ENSMUST00000109578 PnocQ64387 187 aa12.73□□□□□ -0.37
Vps54-202ENSMUST00000109578 F13a1Q8BH61 732 aa12.73□□□□□ -0.37
Vps54-202ENSMUST00000109578 Gpcpd1Q8C0L9 675 aa12.73□□□□□ -0.37
Vps54-202ENSMUST00000109578 Ifih1Q8R5F7 1025 aa12.73□□□□□ -0.37
Vps54-202ENSMUST00000109578 Krt34Q9D646 392 aa12.73□□□□□ -0.37
Vps54-202ENSMUST00000109578 Eef1gQ9D8N0 437 aaKnown RBP12.73□□□□□ -0.37
Vps54-202ENSMUST00000109578 Acot3Q9QYR7 432 aa12.73□□□□□ -0.37
Vps54-202ENSMUST00000109578 Zfyve9A2A8R0 1397 aa12.72□□□□□ -0.37
Vps54-202ENSMUST00000109578 Ccdc24E9PUW8 296 aa12.72□□□□□ -0.37
Vps54-202ENSMUST00000109578 Sap30bpQ02614 308 aa12.72□□□□□ -0.37
Vps54-202ENSMUST00000109578 Fam178bQ24JP3 464 aa12.72□□□□□ -0.37
Vps54-202ENSMUST00000109578 Mapk6Q61532 720 aa12.72□□□□□ -0.37
Vps54-202ENSMUST00000109578 Cct8l1Q80YT3 562 aa12.72□□□□□ -0.37
Vps54-202ENSMUST00000109578 Armcx3Q8BHS6 379 aa12.72□□□□□ -0.37
Vps54-202ENSMUST00000109578 Sh3tc1G3X9F6 1346 aa12.72□□□□□ -0.37
Vps54-202ENSMUST00000109578 Ankrd35E9Q9D8 996 aa12.72□□□□□ -0.37
Vps54-202ENSMUST00000109578 Kdm7aQ3UWM4 940 aa12.72□□□□□ -0.37
Vps54-202ENSMUST00000109578 Krt87Q6IMF0 495 aa12.72□□□□□ -0.37
Vps54-202ENSMUST00000109578 Ccdc148Q6P5U8 527 aa12.72□□□□□ -0.37
Vps54-202ENSMUST00000109578 BcrQ6PAJ1 1270 aa12.72□□□□□ -0.37
Vps54-202ENSMUST00000109578 Tlr11Q6R5P0 926 aa12.72□□□□□ -0.37
Vps54-202ENSMUST00000109578 Krt79Q8VED5 531 aa12.72□□□□□ -0.37
Vps54-202ENSMUST00000109578 PpanQ91YU8 470 aaKnown RBP12.72□□□□□ -0.37
Vps54-202ENSMUST00000109578 Ubxn1Q922Y1 297 aa12.72□□□□□ -0.37
Vps54-202ENSMUST00000109578 Heg1E9Q7X6 1337 aa12.72□□□□□ -0.37
Vps54-202ENSMUST00000109578 Spocd1B1ASB6 936 aa12.72□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 39.1 ms