RNA–Protein interactions for RNA: ENSMUST00000096198.9

Scn8a-202, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 1 (best) BASIC

Gene Scn8a, Length 1,072 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-202ENSMUST00000096198 Dync1li1Q8R1Q8 523 aa9.67□□□□□ -0.86
Scn8a-202ENSMUST00000096198 HdlbpQ8VDJ3 1268 aaKnown RBP9.67□□□□□ -0.86
Scn8a-202ENSMUST00000096198 Sept12Q9D451 317 aa9.67□□□□□ -0.86
Scn8a-202ENSMUST00000096198 Lhx6Q9R1R0 363 aa9.67□□□□□ -0.86
Scn8a-202ENSMUST00000096198 Plxna4Q80UG2 1893 aa9.67□□□□□ -0.86
Scn8a-202ENSMUST00000096198 Wdr81Q5ND34 1934 aa9.66□□□□□ -0.86
Scn8a-202ENSMUST00000096198 Col20a1Q923P0 1320 aa9.66□□□□□ -0.86
Scn8a-202ENSMUST00000096198 Vmn2r76E9Q3F5 853 aa9.66□□□□□ -0.86
Scn8a-202ENSMUST00000096198 Camk4P08414 469 aa9.66□□□□□ -0.86
Scn8a-202ENSMUST00000096198 Kcnj4P52189 445 aa9.66□□□□□ -0.86
Scn8a-202ENSMUST00000096198 Adcyap1r1P70205 496 aa9.66□□□□□ -0.86
Scn8a-202ENSMUST00000096198 Chl1P70232 1209 aa9.66□□□□□ -0.86
Scn8a-202ENSMUST00000096198 Eepd1Q3TGW2 569 aa9.66□□□□□ -0.86
Scn8a-202ENSMUST00000096198 Tmem202Q80W35 275 aa9.66□□□□□ -0.86
Scn8a-202ENSMUST00000096198 Znf618Q80YY7 953 aaKnown RBP9.66□□□□□ -0.86
Scn8a-202ENSMUST00000096198 PdhxQ8BKZ9 501 aa9.66□□□□□ -0.86
Scn8a-202ENSMUST00000096198 AtripQ8BMG1 785 aa9.66□□□□□ -0.86
Scn8a-202ENSMUST00000096198 Olfr1494Q8VGP8 315 aa9.66□□□□□ -0.86
Scn8a-202ENSMUST00000096198 Golga2Q921M4 999 aa9.66□□□□□ -0.86
Scn8a-202ENSMUST00000096198 Fzd5Q9EQD0 585 aa9.66□□□□□ -0.86
Scn8a-202ENSMUST00000096198 Helz2E9QAM5 2947 aaKnown RBP9.66□□□□□ -0.86
Scn8a-202ENSMUST00000096198 Dmxl2Q8BPN8 3032 aa9.66□□□□□ -0.86
Scn8a-202ENSMUST00000096198 Spta1P08032 2415 aa9.65□□□□□ -0.86
Scn8a-202ENSMUST00000096198 Rbm25B2RY56 838 aaKnown RBP9.65□□□□□ -0.86
Scn8a-202ENSMUST00000096198 Gm6576F6YTZ4 274 aa9.65□□□□□ -0.86
Scn8a-202ENSMUST00000096198 Ppp4cP97470 307 aa9.65□□□□□ -0.86
Scn8a-202ENSMUST00000096198 Fam178bQ24JP3 464 aa9.65□□□□□ -0.86
Scn8a-202ENSMUST00000096198 Tmc5Q32NZ6 967 aa9.65□□□□□ -0.86
Scn8a-202ENSMUST00000096198 Lrrc14bQ3UJB3 510 aa9.65□□□□□ -0.86
Scn8a-202ENSMUST00000096198 Slc30a10Q3UVU3 470 aa9.65□□□□□ -0.86
Scn8a-202ENSMUST00000096198 Rps6kc1Q8BLK9 1056 aa9.65□□□□□ -0.86
Scn8a-202ENSMUST00000096198 Q8K2W9 541 aa9.65□□□□□ -0.86
Scn8a-202ENSMUST00000096198 Dppa3Q8QZY3 150 aa9.65□□□□□ -0.86
Scn8a-202ENSMUST00000096198 Plagl2Q925T4 496 aa9.65□□□□□ -0.86
Scn8a-202ENSMUST00000096198 Eid1Q9DCR4 169 aa9.65□□□□□ -0.86
Scn8a-202ENSMUST00000096198 SerhlQ9EPB5 311 aa9.65□□□□□ -0.86
Scn8a-202ENSMUST00000096198 Bcl11aQ9QYE3 773 aa9.65□□□□□ -0.86
Scn8a-202ENSMUST00000096198 Cnot1Q6ZQ08 2375 aaKnown RBP9.65□□□□□ -0.87
Scn8a-202ENSMUST00000096198 C6E9Q6D8 931 aa9.64□□□□□ -0.87
Scn8a-202ENSMUST00000096198 Yme1l1O88967 715 aaKnown RBP9.64□□□□□ -0.87
Scn8a-202ENSMUST00000096198 P01644 108 aa9.64□□□□□ -0.87
Scn8a-202ENSMUST00000096198 P01645 108 aa9.64□□□□□ -0.87
Scn8a-202ENSMUST00000096198 P01646 108 aa9.64□□□□□ -0.87
Scn8a-202ENSMUST00000096198 P01647 108 aa9.64□□□□□ -0.87
Scn8a-202ENSMUST00000096198 Gpr25P0C5I1 358 aa9.64□□□□□ -0.87
Scn8a-202ENSMUST00000096198 Resp18P47939 175 aa9.64□□□□□ -0.87
Scn8a-202ENSMUST00000096198 Pa2g4P50580 394 aaKnown RBP9.64□□□□□ -0.87
Scn8a-202ENSMUST00000096198 Eya3P97480 510 aa9.64□□□□□ -0.87
Scn8a-202ENSMUST00000096198 Zmym6Q8BS54 1249 aa9.64□□□□□ -0.87
Scn8a-202ENSMUST00000096198 Glis1Q8K1M4 789 aa9.64□□□□□ -0.87
Scn8a-202ENSMUST00000096198 Dhx30Q99PU8 1217 aaKnown RBP9.64□□□□□ -0.87
Scn8a-202ENSMUST00000096198 Tomm22Q9CPQ3 142 aa9.64□□□□□ -0.87
Scn8a-202ENSMUST00000096198 Clec1bQ9JL99 229 aa9.64□□□□□ -0.87
Scn8a-202ENSMUST00000096198 GabrqQ9JLF1 638 aa9.64□□□□□ -0.87
Scn8a-202ENSMUST00000096198 Krt24A1L317 512 aa9.63□□□□□ -0.87
Scn8a-202ENSMUST00000096198 Cops5O35864 334 aa9.63□□□□□ -0.87
Scn8a-202ENSMUST00000096198 Entpd2O55026 495 aa9.63□□□□□ -0.87
Scn8a-202ENSMUST00000096198 StrnO55106 780 aa9.63□□□□□ -0.87
Scn8a-202ENSMUST00000096198 Zscan21Q07231 555 aa9.63□□□□□ -0.87
Scn8a-202ENSMUST00000096198 Wfdc9Q3UW41 83 aa9.63□□□□□ -0.87
Scn8a-202ENSMUST00000096198 Fam189a2Q4FZH1 290 aa9.63□□□□□ -0.87
Scn8a-202ENSMUST00000096198 Scnn1aQ61180 699 aa9.63□□□□□ -0.87
Scn8a-202ENSMUST00000096198 Nr2e1Q64104 385 aa9.63□□□□□ -0.87
Scn8a-202ENSMUST00000096198 Cnnm4Q69ZF7 771 aa9.63□□□□□ -0.87
Scn8a-202ENSMUST00000096198 Atp11bQ6DFW5 1175 aa9.63□□□□□ -0.87
Scn8a-202ENSMUST00000096198 Nrg1Q6DR99 700 aa9.63□□□□□ -0.87
Scn8a-202ENSMUST00000096198 Zbtb39Q6PDK0 712 aa9.63□□□□□ -0.87
Scn8a-202ENSMUST00000096198 Ift57Q8BXG3 429 aa9.63□□□□□ -0.87
Scn8a-202ENSMUST00000096198 NkrfQ8BY02 690 aaKnown RBP9.63□□□□□ -0.87
Scn8a-202ENSMUST00000096198 Trmt13Q8BYH3 481 aa9.63□□□□□ -0.87
Scn8a-202ENSMUST00000096198 Nup88Q8CEC0 753 aaKnown RBP9.63□□□□□ -0.87
Scn8a-202ENSMUST00000096198 Trim26Q99PN3 545 aa9.63□□□□□ -0.87
Scn8a-202ENSMUST00000096198 Pebp4Q9D9G2 242 aa9.63□□□□□ -0.87
Scn8a-202ENSMUST00000096198 Mad1l1Q9WTX8 717 aaKnown RBP9.63□□□□□ -0.87
Scn8a-202ENSMUST00000096198 Cd97Q9Z0M6 818 aa9.63□□□□□ -0.87
Scn8a-202ENSMUST00000096198 Stk25Q9Z2W1 426 aa9.63□□□□□ -0.87
Scn8a-202ENSMUST00000096198 Ralgapa2A3KGS3 1872 aa9.62□□□□□ -0.87
Scn8a-202ENSMUST00000096198 Zfp853A0A1D5RM95 733 aa9.62□□□□□ -0.87
Scn8a-202ENSMUST00000096198 Taf4E9QAP7 1042 aaKnown RBP9.62□□□□□ -0.87
Scn8a-202ENSMUST00000096198 2610008E11RikG3X964 669 aa9.62□□□□□ -0.87
Scn8a-202ENSMUST00000096198 Gm3383J3QQ59 259 aa9.62□□□□□ -0.87
Scn8a-202ENSMUST00000096198 Nectin2P32507 530 aa9.62□□□□□ -0.87
Scn8a-202ENSMUST00000096198 Ptpn11P35235 597 aa9.62□□□□□ -0.87
Scn8a-202ENSMUST00000096198 Map1sQ8C052 973 aa9.62□□□□□ -0.87
Scn8a-202ENSMUST00000096198 Eml3Q8VC03 897 aa9.62□□□□□ -0.87
Scn8a-202ENSMUST00000096198 Me2Q99KE1 589 aa9.62□□□□□ -0.87
Scn8a-202ENSMUST00000096198 Atoh8Q99NA2 322 aa9.62□□□□□ -0.87
Scn8a-202ENSMUST00000096198 Kif12Q9D2Z8 642 aa9.62□□□□□ -0.87
Scn8a-202ENSMUST00000096198 Ndufv2Q9D6J6 248 aa9.62□□□□□ -0.87
Scn8a-202ENSMUST00000096198 Fbxo3Q9DC63 480 aa9.62□□□□□ -0.87
Scn8a-202ENSMUST00000096198 Epg5Q80TA9 2572 aa9.61□□□□□ -0.87
Scn8a-202ENSMUST00000096198 ChgaP26339 463 aaKnown RBP9.61□□□□□ -0.87
Scn8a-202ENSMUST00000096198 Gp1bbP56400 206 aa9.61□□□□□ -0.87
Scn8a-202ENSMUST00000096198 Arhgap39P59281 1107 aa9.61□□□□□ -0.87
Scn8a-202ENSMUST00000096198 Sfi1Q3UZY0 1216 aaKnown RBP9.61□□□□□ -0.87
Scn8a-202ENSMUST00000096198 P3h1Q3V1T4 739 aa9.61□□□□□ -0.87
Scn8a-202ENSMUST00000096198 Cyp2c66Q5GLZ0 490 aa9.61□□□□□ -0.87
Scn8a-202ENSMUST00000096198 Nop58Q6DFW4 536 aaKnown RBP9.61□□□□□ -0.87
Scn8a-202ENSMUST00000096198 Adck5Q80V03 582 aa9.61□□□□□ -0.87
Scn8a-202ENSMUST00000096198 Dpp8Q80YA7 892 aa9.61□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 18.2 ms