RNA–Protein interactions for RNA: ENSMUST00000087158.10

Trim40-201, Transcript of Tripartite motif-containing protein 40, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Trim40, Length 2,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40-201ENSMUST00000087158 Ccnt1Q9QWV9 724 aaKnown RBP8.46□□□□□ -1.06
Trim40-201ENSMUST00000087158 NynrinQ5DTZ0 1840 aa8.46□□□□□ -1.06
Trim40-201ENSMUST00000087158 Pcdh11xF6ZNL5 1338 aa8.46□□□□□ -1.06
Trim40-201ENSMUST00000087158 Jakmip2D3YXK0 820 aa8.45□□□□□ -1.06
Trim40-201ENSMUST00000087158 Rsph10bE9PYQ0 876 aa8.45□□□□□ -1.06
Trim40-201ENSMUST00000087158 Akr1c19G3X9Y6 323 aa8.45□□□□□ -1.06
Trim40-201ENSMUST00000087158 Pitpnm1O35954 1243 aa8.45□□□□□ -1.06
Trim40-201ENSMUST00000087158 Il13ra2O88786 383 aa8.45□□□□□ -1.06
Trim40-201ENSMUST00000087158 FosP01101 380 aa8.45□□□□□ -1.06
Trim40-201ENSMUST00000087158 Sfi1Q3UZY0 1216 aaKnown RBP8.45□□□□□ -1.06
Trim40-201ENSMUST00000087158 Nt5c2Q3V1L4 560 aa8.45□□□□□ -1.06
Trim40-201ENSMUST00000087158 Ift88Q61371 824 aa8.45□□□□□ -1.06
Trim40-201ENSMUST00000087158 Abcf1Q6P542 837 aaKnown RBP8.45□□□□□ -1.06
Trim40-201ENSMUST00000087158 Ccdc38Q8CDN8 563 aa8.45□□□□□ -1.06
Trim40-201ENSMUST00000087158 Calhm4Q8CE93 315 aa8.45□□□□□ -1.06
Trim40-201ENSMUST00000087158 Trappc12Q8K2L8 797 aa8.45□□□□□ -1.06
Trim40-201ENSMUST00000087158 Dppa3Q8QZY3 150 aa8.45□□□□□ -1.06
Trim40-201ENSMUST00000087158 Ifih1Q8R5F7 1025 aa8.45□□□□□ -1.06
Trim40-201ENSMUST00000087158 Eps8l1Q8R5F8 716 aa8.45□□□□□ -1.06
Trim40-201ENSMUST00000087158 Ces1Q8VCC2 565 aa8.45□□□□□ -1.06
Trim40-201ENSMUST00000087158 Krt79Q8VED5 531 aa8.45□□□□□ -1.06
Trim40-201ENSMUST00000087158 Ppp1r3gQ9CW07 347 aa8.45□□□□□ -1.06
Trim40-201ENSMUST00000087158 Sertad1Q9JL10 236 aa8.45□□□□□ -1.06
Trim40-201ENSMUST00000087158 Pkd2l2Q9JLG4 621 aa8.45□□□□□ -1.06
Trim40-201ENSMUST00000087158 Gm5737A0A140LI11 423 aa8.45□□□□□ -1.06
Trim40-201ENSMUST00000087158 4932429P05RikA2ADI4 785 aa8.45□□□□□ -1.06
Trim40-201ENSMUST00000087158 LdhbP16125 334 aaKnown RBP8.45□□□□□ -1.06
Trim40-201ENSMUST00000087158 Traf1P39428 409 aa8.45□□□□□ -1.06
Trim40-201ENSMUST00000087158 Snap25P60879 206 aa8.45□□□□□ -1.06
Trim40-201ENSMUST00000087158 NyxP83503 476 aa8.45□□□□□ -1.06
Trim40-201ENSMUST00000087158 Fbln1Q08879 705 aa8.45□□□□□ -1.06
Trim40-201ENSMUST00000087158 Lrrfip1Q3UZ39 729 aaKnown RBP8.45□□□□□ -1.06
Trim40-201ENSMUST00000087158 Psen2Q61144 448 aa8.45□□□□□ -1.06
Trim40-201ENSMUST00000087158 Stxbp2Q64324 593 aa8.45□□□□□ -1.06
Trim40-201ENSMUST00000087158 Churc1Q6DG52 112 aa8.45□□□□□ -1.06
Trim40-201ENSMUST00000087158 Txndc16Q7TN22 820 aa8.45□□□□□ -1.06
Trim40-201ENSMUST00000087158 Peg10Q7TN75 958 aaKnown RBP8.45□□□□□ -1.06
Trim40-201ENSMUST00000087158 Arhgef19Q8BWA8 802 aa8.45□□□□□ -1.06
Trim40-201ENSMUST00000087158 Dnm3Q8BZ98 863 aa8.45□□□□□ -1.06
Trim40-201ENSMUST00000087158 MyripQ8K3I4 856 aa8.45□□□□□ -1.06
Trim40-201ENSMUST00000087158 Ushbp1Q8R370 680 aa8.45□□□□□ -1.06
Trim40-201ENSMUST00000087158 Pcdha12Q91Y18 950 aa8.45□□□□□ -1.06
Trim40-201ENSMUST00000087158 Ppil2Q9D787 521 aa8.45□□□□□ -1.06
Trim40-201ENSMUST00000087158 Uchl5Q9WUP7 329 aa8.45□□□□□ -1.06
Trim40-201ENSMUST00000087158 GsdmeQ9Z2D3 512 aa8.45□□□□□ -1.06
Trim40-201ENSMUST00000087158 Ulk4Q3V129 1303 aa8.45□□□□□ -1.06
Trim40-201ENSMUST00000087158 Scn3aA2ASI5 1947 aa8.44□□□□□ -1.06
Trim40-201ENSMUST00000087158 Mllt3A2AM29 569 aa8.44□□□□□ -1.06
Trim40-201ENSMUST00000087158 Bpifb4A2BGH0 617 aa8.44□□□□□ -1.06
Trim40-201ENSMUST00000087158 Apol7aB2RT54 418 aa8.44□□□□□ -1.06
Trim40-201ENSMUST00000087158 Pak1O88643 545 aa8.44□□□□□ -1.06
Trim40-201ENSMUST00000087158 Pcdha4O88689 947 aa8.44□□□□□ -1.06
Trim40-201ENSMUST00000087158 Bace1P56818 501 aa8.44□□□□□ -1.06
Trim40-201ENSMUST00000087158 Gabpb2P81069 414 aa8.44□□□□□ -1.06
Trim40-201ENSMUST00000087158 Jakmip3Q5DTN8 844 aa8.44□□□□□ -1.06
Trim40-201ENSMUST00000087158 Atp13a3Q5XF89 1219 aa8.44□□□□□ -1.06
Trim40-201ENSMUST00000087158 Senp6Q6P7W0 1132 aa8.44□□□□□ -1.06
Trim40-201ENSMUST00000087158 Camsap3Q80VC9 1252 aa8.44□□□□□ -1.06
Trim40-201ENSMUST00000087158 Bbs9Q811G0 885 aa8.44□□□□□ -1.06
Trim40-201ENSMUST00000087158 Trim9Q8C7M3 817 aa8.44□□□□□ -1.06
Trim40-201ENSMUST00000087158 Phf20l1Q8CCJ9 1013 aa8.44□□□□□ -1.06
Trim40-201ENSMUST00000087158 Mettl5Q8K1A0 209 aa8.44□□□□□ -1.06
Trim40-201ENSMUST00000087158 Washc1Q8VDD8 475 aa8.44□□□□□ -1.06
Trim40-201ENSMUST00000087158 Bhmt2Q91WS4 363 aa8.44□□□□□ -1.06
Trim40-201ENSMUST00000087158 Pcdhgc5Q91XW9 944 aa8.44□□□□□ -1.06
Trim40-201ENSMUST00000087158 Mfap3Q922T2 349 aa8.44□□□□□ -1.06
Trim40-201ENSMUST00000087158 Mrps5Q99N87 432 aaKnown RBP8.44□□□□□ -1.06
Trim40-201ENSMUST00000087158 AatfQ9JKX4 526 aaKnown RBP8.44□□□□□ -1.06
Trim40-201ENSMUST00000087158 IkQ9Z1M8 557 aaKnown RBP8.44□□□□□ -1.06
Trim40-201ENSMUST00000087158 Gm11983V9GXS8 105 aa8.44□□□□□ -1.06
Trim40-201ENSMUST00000087158 Ccdc88cQ6VGS5 2009 aa8.44□□□□□ -1.06
Trim40-201ENSMUST00000087158 NrapQ80XB4 1728 aa8.44□□□□□ -1.06
Trim40-201ENSMUST00000087158 Dnajc25A2ALW5 357 aa8.44□□□□□ -1.06
Trim40-201ENSMUST00000087158 Nova2D3YVV7 556 aaKnown RBP8.44□□□□□ -1.06
Trim40-201ENSMUST00000087158 Mpp3O88910 568 aa8.44□□□□□ -1.06
Trim40-201ENSMUST00000087158 CatspereP0DP43 985 aa8.44□□□□□ -1.06
Trim40-201ENSMUST00000087158 GmpsQ3THK7 693 aa8.44□□□□□ -1.06
Trim40-201ENSMUST00000087158 Xxylt1Q3U4G3 392 aa8.44□□□□□ -1.06
Trim40-201ENSMUST00000087158 Prr7Q3V0I2 269 aa8.44□□□□□ -1.06
Trim40-201ENSMUST00000087158 Tmprss11eQ5S248 423 aa8.44□□□□□ -1.06
Trim40-201ENSMUST00000087158 Tom1l2Q5SRX1 507 aa8.44□□□□□ -1.06
Trim40-201ENSMUST00000087158 Sap130Q8BIH0 1057 aa8.44□□□□□ -1.06
Trim40-201ENSMUST00000087158 Kcnv2Q8CFS6 562 aa8.44□□□□□ -1.06
Trim40-201ENSMUST00000087158 Tut1Q8R3F9 869 aa8.44□□□□□ -1.06
Trim40-201ENSMUST00000087158 Rnaseh2aQ9CWY8 301 aa8.44□□□□□ -1.06
Trim40-201ENSMUST00000087158 Mss51Q9D5Z5 446 aa8.44□□□□□ -1.06
Trim40-201ENSMUST00000087158 Ugt1a6bK9J7B2 531 aa8.43□□□□□ -1.06
Trim40-201ENSMUST00000087158 Tph1P17532 447 aa8.43□□□□□ -1.06
Trim40-201ENSMUST00000087158 Samsn1P57725 372 aa8.43□□□□□ -1.06
Trim40-201ENSMUST00000087158 Kifap3P70188 793 aa8.43□□□□□ -1.06
Trim40-201ENSMUST00000087158 Stim1P70302 685 aa8.43□□□□□ -1.06
Trim40-201ENSMUST00000087158 Siah1bQ06985 282 aa8.43□□□□□ -1.06
Trim40-201ENSMUST00000087158 Zfp953Q3UPV7 304 aa8.43□□□□□ -1.06
Trim40-201ENSMUST00000087158 Fkbp3Q62446 224 aaKnown RBP8.43□□□□□ -1.06
Trim40-201ENSMUST00000087158 Ugt1a6Q64435 531 aa8.43□□□□□ -1.06
Trim40-201ENSMUST00000087158 Ugt1a7cQ6ZQM8 531 aa8.43□□□□□ -1.06
Trim40-201ENSMUST00000087158 Spag5Q7TME2 1165 aa8.43□□□□□ -1.06
Trim40-201ENSMUST00000087158 NelfbQ8C4Y3 580 aa8.43□□□□□ -1.06
Trim40-201ENSMUST00000087158 Fam161bQ8CB59 589 aa8.43□□□□□ -1.06
Trim40-201ENSMUST00000087158 Frat2Q8K025 231 aa8.43□□□□□ -1.06
Retrieved 100 of 22,080 RNA–protein pairs in 32.5 ms