RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Tmem68Q9D850 329 aa10.67□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Tmem191cQ9JJB1 302 aa10.67□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Ppp2r3cQ9JK24 453 aa10.67□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Kif6E9PX57 802 aa10.66□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Phkg1P07934 388 aa10.66□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Ctnna1P26231 906 aaKnown RBP10.66□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Usp4P35123 962 aa10.66□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Gucy2fQ5SDA5 1108 aa10.66□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Exoc3Q6KAR6 755 aa10.66□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Stk38lQ7TSE6 464 aa10.66□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Idi2Q8BFZ6 227 aa10.66□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Ccdc134Q8C7V8 229 aa10.66□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Actl9Q8CG27 415 aa10.66□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Tspyl4Q8VD63 406 aa10.66□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Smap1Q91VZ6 440 aa10.66□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Pagr1aQ99L02 253 aa10.66□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Tmem53Q9D0Z3 276 aa10.66□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Cyth1Q9QX11 398 aa10.66□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Gfpt2Q9Z2Z9 682 aa10.66□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Rbm6S4R1W5 1118 aaKnown RBP10.66□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Myh7bA2AQP0 1941 aa10.66□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Frmd7A2AD83 703 aa10.66□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Nova2D3YVV7 556 aaKnown RBP10.66□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Gsto1O09131 240 aa10.66□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 PurbO35295 324 aaKnown RBP10.66□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Stk10O55098 966 aa10.66□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Cyp2b9P12790 491 aa10.66□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Tnnc1P19123 161 aa10.66□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 MagohP61327 146 aaKnown RBP10.66□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Gm4981Q3ULJ8 291 aa10.66□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Cdkl5Q3UTQ8 938 aa10.66□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Xlr3aQ60595 226 aa10.66□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Zswim5Q80TC6 1188 aa10.66□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Naa15Q80UM3 865 aaKnown RBP10.66□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Eif2aQ8BJW6 581 aaKnown RBP10.66□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Lsm14bQ8CGC4 385 aaKnown RBP10.66□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Alg3Q8K2A8 438 aa10.66□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Lmcd1Q8VEE1 365 aa10.66□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Lrrfip2Q91WK0 415 aa10.66□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Haus8Q99L00 373 aa10.66□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 MagohbQ9CQL1 146 aa10.66□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Dph5Q9CWQ0 281 aa10.66□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Ndufa13Q9ERS2 144 aa10.66□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Sh3glb1Q9JK48 365 aa10.66□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 NbnQ9R207 751 aa10.66□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 AfpP02772 605 aa10.66□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 LdhaP06151 332 aaKnown RBP10.66□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Ifnar1P33896 590 aa10.66□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Fam129aQ3UW53 926 aa10.66□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Ggnbp2Q5SV77 696 aa10.66□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Nrde2Q80XC6 1172 aa10.66□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Ttc26Q8BS45 554 aa10.66□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Dclk3Q8BWQ5 790 aa10.66□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 AagabQ8R2R3 316 aa10.66□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Prpf3Q922U1 683 aaKnown RBP10.66□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 GatbQ99JT1 557 aa10.66□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Ptdss1Q99LH2 473 aaKnown RBP10.66□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Gtf2h1Q9DBA9 547 aa10.66□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Copb1Q9JIF7 953 aa10.66□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Trem1Q9JKE2 230 aa10.66□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Cdhr2E9Q7P9 1308 aa10.65□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Zfp853A0A1D5RM95 733 aa10.65□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Bicdl1A0JNT9 577 aa10.65□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Xbp1O35426 267 aa10.65□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 PigrO70570 771 aa10.65□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 AladP10518 330 aa10.65□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 OatP29758 439 aa10.65□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Aimp1P31230 310 aaKnown RBP10.65□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 HmmrQ00547 794 aaKnown RBP10.65□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 CtcfQ61164 736 aaKnown RBP10.65□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Krt74Q6IFZ9 495 aa10.65□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Parp6Q6P6P7 630 aa10.65□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Smarca1Q6PGB8 1046 aa10.65□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Trim17Q7TPM3 477 aa10.65□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Daam1Q8BPM0 1077 aa10.65□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Hook3Q8BUK6 718 aa10.65□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Cdk17Q8K0D0 523 aa10.65□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Irak4Q8R4K2 459 aa10.65□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Pramef12Q9D2F1 463 aa10.65□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Arl2bpQ9D385 163 aa10.65□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Rpf2Q9JJ80 306 aaKnown RBP10.65□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Orc1Q9Z1N2 840 aaKnown RBP10.65□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Btbd19S4R1I0 287 aa10.65□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Birc3O08863 600 aa10.65□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Hoxb7P09024 217 aa10.65□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Uts2bQ765I1 113 aa10.65□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Olfr119Q7TRJ5 321 aa10.65□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 TufmQ8BFR5 452 aa10.65□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 FtoQ8BGW1 502 aa10.65□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Atp2a1Q8R429 994 aa10.65□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Prkag2Q91WG5 566 aa10.65□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Psmd6Q99JI4 389 aa10.65□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Mrps9Q9D7N3 390 aaKnown RBP10.65□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Prpf4Q9DAW6 521 aaKnown RBP10.65□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Slc8a3S4R2P9 928 aa10.65□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 AdgbG3UZ78 1657 aa10.65□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Tbc1d16A2ABG4 766 aa10.64□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Ttll7A4Q9F0 912 aa10.64□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Mms22lB1AUR6 1238 aa10.64□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Snx3O70492 162 aa10.64□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 55.6 ms