RNA–Protein interactions for RNA: ENSMUST00000080860.12

Ccdc28a-202, Transcript of Coiled-coil domain-containing 28A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28a, Length 1,190 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-202ENSMUST00000080860 Mbtps1Q9WTZ2 1052 aa13.99□□□□□ -0.17
Ccdc28a-202ENSMUST00000080860 Cep350E9Q309 3095 aa13.99□□□□□ -0.17
Ccdc28a-202ENSMUST00000080860 1110002E22RikE0CYV9 1786 aa13.99□□□□□ -0.17
Ccdc28a-202ENSMUST00000080860 Zfp853A0A1D5RM95 733 aa13.98□□□□□ -0.17
Ccdc28a-202ENSMUST00000080860 GlrbP48168 496 aa13.98□□□□□ -0.17
Ccdc28a-202ENSMUST00000080860 Lrrc14bQ3UJB3 510 aa13.98□□□□□ -0.17
Ccdc28a-202ENSMUST00000080860 Nt5c2Q3V1L4 560 aa13.98□□□□□ -0.17
Ccdc28a-202ENSMUST00000080860 Pla2g4eQ50L42 875 aa13.98□□□□□ -0.17
Ccdc28a-202ENSMUST00000080860 Arhgap1Q5FWK3 439 aa13.98□□□□□ -0.17
Ccdc28a-202ENSMUST00000080860 Samhd1Q60710 627 aa13.98□□□□□ -0.17
Ccdc28a-202ENSMUST00000080860 Fscn1Q61553 493 aa13.98□□□□□ -0.17
Ccdc28a-202ENSMUST00000080860 Hoxa13Q62424 386 aa13.98□□□□□ -0.17
Ccdc28a-202ENSMUST00000080860 Gpbp1l1Q6NZP2 473 aa13.98□□□□□ -0.17
Ccdc28a-202ENSMUST00000080860 Tbc1d5Q80XQ2 815 aa13.98□□□□□ -0.17
Ccdc28a-202ENSMUST00000080860 Dhx32Q8BZS9 744 aa13.98□□□□□ -0.17
Ccdc28a-202ENSMUST00000080860 Plcd1Q8R3B1 756 aa13.98□□□□□ -0.17
Ccdc28a-202ENSMUST00000080860 GldcQ91W43 1025 aa13.98□□□□□ -0.17
Ccdc28a-202ENSMUST00000080860 F11Q91Y47 624 aa13.98□□□□□ -0.17
Ccdc28a-202ENSMUST00000080860 Tob2Q9JM55 345 aa13.98□□□□□ -0.17
Ccdc28a-202ENSMUST00000080860 Cdc42ep5Q9Z0X0 150 aa13.98□□□□□ -0.17
Ccdc28a-202ENSMUST00000080860 Dock3Q8CIQ7 2027 aa13.98□□□□□ -0.17
Ccdc28a-202ENSMUST00000080860 Cntnap5cQ0V8T7 1305 aa13.97□□□□□ -0.17
Ccdc28a-202ENSMUST00000080860 Ncor1Q60974 2453 aa13.97□□□□□ -0.17
Ccdc28a-202ENSMUST00000080860 Trip11E9Q512 1976 aa13.97□□□□□ -0.17
Ccdc28a-202ENSMUST00000080860 Dnai2A2AC93 623 aa13.97□□□□□ -0.17
Ccdc28a-202ENSMUST00000080860 Dhtkd1A2ATU0 921 aa13.97□□□□□ -0.17
Ccdc28a-202ENSMUST00000080860 Itgb5O70309 798 aa13.97□□□□□ -0.17
Ccdc28a-202ENSMUST00000080860 PuraP42669 321 aaKnown RBP13.97□□□□□ -0.17
Ccdc28a-202ENSMUST00000080860 Nap1l2P51860 460 aa13.97□□□□□ -0.17
Ccdc28a-202ENSMUST00000080860 Cyp2c38P56655 490 aa13.97□□□□□ -0.17
Ccdc28a-202ENSMUST00000080860 GaaP70699 953 aa13.97□□□□□ -0.17
Ccdc28a-202ENSMUST00000080860 Atg4cQ811C2 458 aa13.97□□□□□ -0.17
Ccdc28a-202ENSMUST00000080860 Fam109aQ8BH49 266 aa13.97□□□□□ -0.17
Ccdc28a-202ENSMUST00000080860 Rtn1Q8K0T0 780 aa13.97□□□□□ -0.17
Ccdc28a-202ENSMUST00000080860 Acat1Q8QZT1 424 aa13.97□□□□□ -0.17
Ccdc28a-202ENSMUST00000080860 Mtmr14Q8VEL2 648 aa13.97□□□□□ -0.17
Ccdc28a-202ENSMUST00000080860 Pkp2Q9CQ73 795 aaKnown RBP13.97□□□□□ -0.17
Ccdc28a-202ENSMUST00000080860 LlphQ9D945 130 aaKnown RBP13.97□□□□□ -0.17
Ccdc28a-202ENSMUST00000080860 Eif4e3Q9DBB5 207 aa13.97□□□□□ -0.17
Ccdc28a-202ENSMUST00000080860 Stk39Q9Z1W9 556 aa13.97□□□□□ -0.17
Ccdc28a-202ENSMUST00000080860 Ank3G5E8K5 1961 aa13.96□□□□□ -0.17
Ccdc28a-202ENSMUST00000080860 PcntP48725 2898 aa13.96□□□□□ -0.17
Ccdc28a-202ENSMUST00000080860 Slc6a21A0A1B0GSD2 748 aa13.96□□□□□ -0.17
Ccdc28a-202ENSMUST00000080860 Supt3B0QZW4 406 aa13.96□□□□□ -0.17
Ccdc28a-202ENSMUST00000080860 Trim12cD3Z3L3 497 aa13.96□□□□□ -0.17
Ccdc28a-202ENSMUST00000080860 Gm20425E9Q035 978 aaKnown RBP13.96□□□□□ -0.17
Ccdc28a-202ENSMUST00000080860 FosP01101 380 aa13.96□□□□□ -0.17
Ccdc28a-202ENSMUST00000080860 F2rP30558 430 aa13.96□□□□□ -0.17
Ccdc28a-202ENSMUST00000080860 SrprbP47758 269 aa13.96□□□□□ -0.17
Ccdc28a-202ENSMUST00000080860 Nlrx1Q3TL44 975 aa13.96□□□□□ -0.17
Ccdc28a-202ENSMUST00000080860 Phf24Q80TL4 400 aa13.96□□□□□ -0.17
Ccdc28a-202ENSMUST00000080860 Cnksr3Q8BMA3 555 aa13.96□□□□□ -0.17
Ccdc28a-202ENSMUST00000080860 EngaseQ8BX80 734 aa13.96□□□□□ -0.17
Ccdc28a-202ENSMUST00000080860 Smoc2Q8CD91 447 aa13.96□□□□□ -0.17
Ccdc28a-202ENSMUST00000080860 Kiaa1024Q8K3V7 917 aa13.96□□□□□ -0.17
Ccdc28a-202ENSMUST00000080860 Ca9Q8VHB5 437 aa13.96□□□□□ -0.17
Ccdc28a-202ENSMUST00000080860 Cep89Q9CZX2 791 aa13.96□□□□□ -0.17
Ccdc28a-202ENSMUST00000080860 Cndp2Q9D1A2 475 aaKnown RBP13.96□□□□□ -0.17
Ccdc28a-202ENSMUST00000080860 Galk1Q9R0N0 392 aa13.96□□□□□ -0.17
Ccdc28a-202ENSMUST00000080860 Olfr67F8VPJ8 320 aa13.95□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Adam15O88839 864 aa13.95□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Hoxc8P09025 242 aa13.95□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Phka1P18826 1241 aa13.95□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Ppp1r10Q80W00 888 aaKnown RBP13.95□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Ece2Q80Z60 881 aa13.95□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Vps53Q8CCB4 832 aa13.95□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Iqsec1Q8R0S2 961 aa13.95□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Sppl3Q9CUS9 384 aa13.95□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Ccdc7Q9D541 371 aa13.95□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Ccdc81Q9D5W4 654 aa13.95□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Tekt1Q9DAJ2 418 aa13.95□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Pes1Q9EQ61 584 aaKnown RBP13.95□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Ubxn8Q9QZ49 277 aa13.95□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 LctF8VPT3 1931 aa13.95□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Robo3Q9Z2I4 1366 aa13.95□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Jakmip2D3YXK0 820 aa13.94□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 DcxO88809 366 aa13.94□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Ptpn11P35235 597 aa13.94□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Lman2lP59481 347 aa13.94□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Cnnm3Q32NY4 713 aa13.94□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Xxylt1Q3U4G3 392 aa13.94□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Fdxacb1Q3UY23 622 aa13.94□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Mars2Q499X9 586 aaKnown RBP13.94□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Tp53i13Q5F267 385 aa13.94□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Zfp943Q6NZP4 507 aa13.94□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Dlg1Q811D0 905 aaKnown RBP13.94□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Aldh5a1Q8BWF0 523 aa13.94□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Agbl2Q8CDK2 862 aa13.94□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Adnp2Q8CHC8 1165 aaKnown RBP13.94□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Vmn1r191Q8K4D0 298 aa13.94□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Tubb6Q922F4 447 aa13.94□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Xpo5Q924C1 1204 aaKnown RBP13.94□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Cul5Q9D5V5 780 aa13.94□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Q9DAQ4 598 aa13.94□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Gon4lQ9DB00 2260 aa13.94□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Zc3h7bF8VPP8 982 aaKnown RBP13.93□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 PtprcP06800 1291 aa13.93□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Erbb2P70424 1256 aa13.93□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Ctdnep1Q3TP92 244 aa13.93□□□□□ -0.18
Ccdc28a-202ENSMUST00000080860 Palb2Q3U0P1 1104 aa13.93□□□□□ -0.18
Retrieved 100 of 22,080 RNA–protein pairs in 24.5 ms