RNA–Protein interactions for RNA: ENSMUST00000062439.4

Ccdc54-201, Transcript of Coiled-coil domain-containing protein 54, mousemouse

APPRIS P1 BASIC

Gene Ccdc54, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc54-201ENSMUST00000062439 Prf1P10820 554 aa9.53□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Esr1P19785 599 aa9.53□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Il6raP22272 460 aa9.53□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Stat3P42227 770 aaKnown RBP9.53□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 GalcP54818 684 aa9.53□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Acp5Q05117 327 aa9.53□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Tmem255bQ5FW56 369 aa9.53□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Cyp7b1Q60991 507 aa9.53□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Gstm4Q8R5I6 218 aa9.53□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Olfr434Q8VF17 321 aa9.53□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Phkg2Q9DB30 406 aa9.53□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Dll4Q9JI71 686 aa9.53□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Fbxo17Q9QZM8 286 aa9.53□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 HgfacQ9R098 653 aa9.53□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 CkmP07310 381 aa9.52□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Tacr2P30549 384 aa9.52□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Nr5a1P33242 462 aa9.52□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Opa1P58281 960 aa9.52□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Msx2Q03358 267 aa9.52□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Dact3Q0PHV7 610 aa9.52□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Ccdc69Q3TCJ8 202 aa9.52□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Gm4981Q3ULJ8 291 aa9.52□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Naf1Q3UMQ8 489 aa9.52□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Caskin1Q6P9K8 1431 aa9.52□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Ston2Q8BZ60 895 aa9.52□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Tmem132cQ8CEF9 1099 aa9.52□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Brms1Q99N20 246 aa9.52□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Hyal6Q9D4E9 494 aa9.52□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Il36bQ9D6Z6 183 aa9.52□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Hapln2Q9ESM3 341 aa9.52□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Hecw1Q8K4P8 1604 aa9.52□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Cdc42bpbQ7TT50 1713 aa9.51□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 RereQ80TZ9 1558 aa9.51□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Naip2Q9QUK4 1447 aa9.51□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Gm21731A0A286YDE9 180 aa9.51□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Zkscan2G3X952 960 aa9.51□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Pla2g4aP47713 748 aa9.51□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Klrb1Q0ZUP1 214 aa9.51□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Gm29609Q3UU56 907 aa9.51□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 EappQ5BU09 281 aa9.51□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Adam12Q61824 903 aa9.51□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Madcam1Q61826 405 aa9.51□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Gtf3c2Q8BL74 907 aa9.51□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Snx17Q8BVL3 470 aa9.51□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Armcx6Q8K3A6 301 aa9.51□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 McmbpQ8R3C0 642 aa9.51□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Ppp6r2Q8R3Q2 923 aa9.51□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Olfr532Q8VGT4 309 aa9.51□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Add2Q9QYB8 725 aa9.51□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Adamtsl3G3UXC7 1706 aa9.51□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Dip2cE9PWR4 1557 aa9.5□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Fhl2O70433 279 aa9.5□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Hsd17b4P51660 735 aaKnown RBP9.5□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Nos3P70313 1202 aa9.5□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Jdp2P97875 163 aa9.5□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Asphd1Q2TA57 360 aa9.5□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Dhrs11Q3U0B3 260 aa9.5□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Adam6bQ6IMH7 756 aa9.5□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Fam205cQ80YD3 371 aa9.5□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Fstl5Q8BFR2 847 aa9.5□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Micall1Q8BGT6 870 aa9.5□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Olfr523Q8VFE7 317 aa9.5□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Hspa12bQ9CZJ2 685 aa9.5□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Eef1akmt2Q9D853 244 aa9.5□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Arhgef40Q3UPH7 1517 aa9.5□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Ccnb3Q810T2 1396 aa9.5□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Trappc8E9PWG2 1437 aa9.49□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Slc4a3P16283 1227 aa9.49□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Pou3f2P31360 445 aa9.49□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Dpf3P58269 378 aa9.49□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Gmeb2P58929 530 aa9.49□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Q3TTL0 348 aa9.49□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 WhammQ571B6 793 aa9.49□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Fbxl7Q5BJ29 491 aa9.49□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Atxn2lQ7TQH0 1049 aaKnown RBP9.49□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Exosc6Q8BTW3 273 aa9.49□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Rhpn2Q8BWR8 686 aa9.49□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Uhrf1Q8VDF2 782 aaKnown RBP9.49□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Bcl2l12Q9D3J3 255 aa9.49□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 EhhadhQ9DBM2 718 aa9.49□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Tnfrsf22Q9ER62 198 aa9.49□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Zmym4A2A791 1549 aaKnown RBP9.49□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Tdrd9Q14BI7 1383 aa9.49□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Atp10aO54827 1508 aa9.48□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Cfap65Q3V0B4 1847 aa9.48□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Gm6268A2A3U9 297 aa9.48□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Grin3aA2AIR5 1135 aa9.48□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Anapc15P60007 132 aa9.48□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Pcbp1P60335 356 aaKnown RBP9.48□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Surf6P70279 355 aaKnown RBP9.48□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Rexo1Q7TT28 1213 aa9.48□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 1700001C19RikQ8K168 210 aa9.48□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Olfr771Q8VFH6 317 aa9.48□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Mtfr1lQ9CWE0 289 aa9.48□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Lrrc34Q9DAM1 415 aa9.48□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Tmprss6Q9DBI0 811 aa9.48□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Tbx18Q9EPZ6 613 aa9.48□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Rgs20Q9QZB1 239 aa9.48□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Brwd3A2AHJ4 1799 aa9.47□□□□□ -0.89
Ccdc54-201ENSMUST00000062439 Itga8A2ARA8 1062 aa9.47□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 24.6 ms