RNA–Protein interactions for RNA: ENSMUST00000055636.12

Clrn1-202, Transcript of Clarin-1, mousemouse

TSL 1 (best) BASIC

Gene Clrn1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1-202ENSMUST00000055636 Tmx4Q8C0L0 335 aa7.97□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Cypt1Q8CH20 168 aa7.97□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Spata4Q8K3V1 295 aa7.97□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Myo1hQ9D6A1 958 aa7.97□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Eif4enif1Q9EST3 983 aaKnown RBP7.97□□□□□ -1.13
Clrn1-202ENSMUST00000055636 StrcQ8VIM6 1809 aa7.97□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Trim30cD3YVI9 513 aa7.97□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Akr1c19G3X9Y6 323 aa7.97□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Lmnb1P14733 588 aaKnown RBP7.97□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Nap1l1P28656 391 aaKnown RBP7.97□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Vcam1P29533 739 aa7.97□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Lilrb3P97484 841 aa7.97□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Tmtc2Q56A06 836 aa7.97□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Sco1Q5SUC9 284 aa7.97□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Igbp1Q61249 340 aa7.97□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Papd7Q6PB75 542 aa7.97□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Znf609Q8BZ47 1413 aa7.97□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Lztr1Q9CQ33 837 aa7.97□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Mtfr1lQ9CWE0 289 aa7.97□□□□□ -1.13
Clrn1-202ENSMUST00000055636 E9QMW4 1145 aa7.96□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Gm21969J3QJZ1 289 aa7.96□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Sema3fO88632 785 aa7.96□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Cdh15P33146 784 aa7.96□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Capza3P70190 299 aa7.96□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Tubb5P99024 444 aaKnown RBP7.96□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Plekha7Q3UIL6 1118 aaKnown RBP7.96□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Nsrp1Q5NCR9 542 aa7.96□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Slc9a1Q61165 820 aa7.96□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Scaf8Q6DID3 1268 aa7.96□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Fbxo41Q6NS60 873 aa7.96□□□□□ -1.14
Clrn1-202ENSMUST00000055636 AopepQ8BXQ6 817 aa7.96□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Def6Q8C2K1 630 aa7.96□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Mtmr4Q91XS1 1190 aa7.96□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Eps8l2Q99K30 729 aa7.96□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Tmem79Q9D709 391 aa7.96□□□□□ -1.14
Clrn1-202ENSMUST00000055636 ThegQ9JMB1 375 aa7.96□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Dnajc7Q9QYI3 494 aa7.96□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Btaf1E9QAE3 1848 aa7.96□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Pabpc1lA2A5N3 607 aaKnown RBP7.96□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Fam186bD3Z420 943 aa7.96□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Gm4307E9PZY4 289 aa7.96□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Gm4312K9J7E2 289 aa7.96□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Gfpt1P47856 697 aa7.96□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Npdc1Q64322 332 aa7.96□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Shtn1Q8K2Q9 631 aa7.96□□□□□ -1.14
Clrn1-202ENSMUST00000055636 KynuQ9CXF0 464 aa7.96□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Mkrn1Q9QXP6 481 aa7.96□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Nr2e3Q9QXZ7 395 aa7.96□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Nup188Q6ZQH8 1759 aa7.96□□□□□ -1.14
Clrn1-202ENSMUST00000055636 VirmaA2AIV2 1811 aaKnown RBP7.95□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Usp34Q6ZQ93 3582 aa7.95□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Clrn2B2RVW2 232 aa7.95□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Ccdc6D3YZP9 469 aa7.95□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Olfr247E9PVJ7 320 aa7.95□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Olfr819K7N727 320 aa7.95□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Zfpm1O35615 995 aa7.95□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Snx12O70493 165 aa7.95□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Fbln1Q08879 705 aa7.95□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Sycp1Q62209 993 aa7.95□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Gja3Q64448 417 aa7.95□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Haus6Q6NV99 933 aaKnown RBP7.95□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Ambra1A2AH22 1300 aa7.95□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Gm7356A0A087WSA6 508 aa7.95□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Palm3A2TJV2 734 aa7.95□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Cyp26c1B2RXA7 518 aa7.95□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Ccdc24E9PUW8 296 aa7.95□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Gm5134E9QAB5 671 aa7.95□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Arhgap6O54834 987 aa7.95□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Il27raO70394 623 aa7.95□□□□□ -1.14
Clrn1-202ENSMUST00000055636 D1Pas1P16381 660 aa7.95□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Nr5a1P33242 462 aa7.95□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Sept2P42208 361 aaKnown RBP7.95□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Rad23bP54728 416 aa7.95□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Stim2P83093 746 aa7.95□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Serpinb6dQ3UWK8 375 aa7.95□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Prr7Q3V0I2 269 aa7.95□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Tbc1d9bQ5SVR0 1263 aa7.95□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Ddx3yQ62095 658 aaKnown RBP7.95□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Cnga2Q62398 664 aa7.95□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Cyp4f39Q8BGU0 532 aa7.95□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Matr3Q8K310 846 aaKnown RBP7.95□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Hexim1Q8R409 356 aaKnown RBP7.95□□□□□ -1.14
Clrn1-202ENSMUST00000055636 EpgnQ924X1 152 aa7.95□□□□□ -1.14
Clrn1-202ENSMUST00000055636 NagaQ9QWR8 415 aa7.95□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Dock5B2RY04 1868 aa7.95□□□□□ -1.14
Clrn1-202ENSMUST00000055636 PfasQ5SUR0 1337 aa7.95□□□□□ -1.14
Clrn1-202ENSMUST00000055636 ByslO54825 436 aaKnown RBP7.94□□□□□ -1.14
Clrn1-202ENSMUST00000055636 KhsrpQ3U0V1 748 aaKnown RBP7.94□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Bbof1Q3V079 533 aa7.94□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Pde1cQ64338 706 aa7.94□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Secisbp2lQ6A098 1086 aaKnown RBP7.94□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Krt42Q6IFX2 452 aa7.94□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Ppp2r5bQ6PD28 497 aa7.94□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Nop9Q8BMC4 636 aaKnown RBP7.94□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Msantd4Q91YU3 345 aa7.94□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Apopt1Q9CQW7 192 aa7.94□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Fam173bQ9D1Z3 247 aa7.94□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Nxnl2Q9D531 156 aa7.94□□□□□ -1.14
Clrn1-202ENSMUST00000055636 Psmd10Q9Z2X2 231 aa7.94□□□□□ -1.14
Clrn1-202ENSMUST00000055636 TicrrQ8BQ33 1889 aa7.94□□□□□ -1.14
Retrieved 100 of 22,080 RNA–protein pairs in 17.5 ms