RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Ccdc78D3Z5T1 437 aa11.26□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Krt19P19001 403 aa11.26□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 S100bP50114 92 aa11.26□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Polr2fP61219 127 aa11.26□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Ppp2r5aQ6PD03 486 aa11.26□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Snx14Q8BHY8 964 aa11.26□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Tgs1Q923W1 853 aa11.26□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Krt71Q9R0H5 524 aa11.26□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Trove2O08848 538 aa11.25□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Stat4P42228 749 aa11.25□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Evi5P97366 809 aa11.25□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 SlmapQ3URD3 845 aa11.25□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 PigsQ6PD26 555 aaKnown RBP11.25□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Nacc1Q7TSZ8 514 aa11.25□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Haus7Q8BKT8 364 aa11.25□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Arhgap24Q8C4V1 747 aa11.25□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 LgsnQ8CIX8 563 aa11.25□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Rpap2Q8VC34 614 aa11.25□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 AdarQ99MU3 1178 aaKnown RBP11.25□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Slit3Q9WVB4 1523 aa11.25□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Tspyl1O88852 379 aa11.25□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Alppl2P24823 529 aa11.25□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Xxylt1Q3U4G3 392 aa11.25□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Cracr2aQ3UP38 310 aa11.25□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Rnf207Q3V3A7 635 aa11.25□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Afg3l2Q8JZQ2 802 aaKnown RBP11.25□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Eif4a3Q91VC3 411 aaKnown RBP11.25□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Sdr42e1Q9D665 394 aa11.25□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Actn2Q9JI91 894 aa11.25□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Nwd1A6H603 1563 aa11.25□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Cdc25aP48964 514 aa11.25□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Sfi1Q3UZY0 1216 aaKnown RBP11.25□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 RilpQ5ND29 369 aa11.25□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Ppp1r13bQ62415 1087 aa11.25□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Iqcb1Q8BP00 598 aa11.25□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Scfd1Q8BRF7 639 aaKnown RBP11.25□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Rasgrp4Q8BTM9 673 aa11.25□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 SncbQ91ZZ3 133 aa11.25□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 DohhA0A1Y7VJ29 135 aa11.25□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Ccdc13D3YV10 709 aa11.25□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Eef1dP57776 281 aaKnown RBP11.25□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Arhgap10Q6Y5D8 786 aa11.25□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Atp5c1Q91VR2 298 aaKnown RBP11.25□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 GakQ99KY4 1305 aa11.25□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 AdgbG3UZ78 1657 aa11.24□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Ccdc85cE9Q6B2 420 aa11.24□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Vmn2r78K7N6U5 853 aa11.24□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Axin2O88566 840 aa11.24□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Ercc5P35689 1170 aa11.24□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Kcnb1Q03717 857 aa11.24□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Kiaa1211Q5PR69 1207 aa11.24□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 KhnynQ80U38 671 aa11.24□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Lmbrd1Q8K0B2 537 aa11.24□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Lrrc41Q8K1C9 807 aa11.24□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Ivns1abpQ920Q8 642 aa11.24□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Sf3b3Q921M3 1217 aaKnown RBP11.24□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Gm45194A0A140LJG2 572 aa11.24□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Kmt5aQ2YDW7 349 aa11.24□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Frmd8Q3UFK8 466 aa11.24□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Cyp4x1Q6A152 507 aa11.24□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Adgrg6Q6F3F9 1165 aa11.24□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 CactinQ9CS00 772 aaKnown RBP11.24□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Popdc2Q9ES82 367 aa11.24□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Lbhd1A0A087WPA0 259 aa11.24□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Ddx23D3Z0M9 819 aaKnown RBP11.24□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Nr1i3O35627 358 aa11.24□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Rgs9O54828 675 aa11.24□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 CatspereP0DP43 985 aa11.24□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Tnnc2P20801 160 aa11.24□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Scnn1aQ61180 699 aa11.24□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Sept9Q80UG5 583 aa11.24□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Qser1A2BIE1 1698 aa11.24□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 CopeO89079 308 aa11.24□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Stim2P83093 746 aa11.24□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Q3TYL0 343 aa11.24□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Trip13Q3UA06 432 aa11.24□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Krt12Q64291 487 aa11.24□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Cracr2bQ80ZJ8 394 aa11.24□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Pramel6Q810Y9 485 aa11.24□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Tor4aQ8BH02 426 aa11.24□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Cep85Q8BMK0 761 aa11.24□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Yars2Q8BYL4 472 aaKnown RBP11.24□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Polr2bQ8CFI7 1174 aaKnown RBP11.24□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Golph3lQ8R088 285 aaKnown RBP11.24□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Q91WD4 421 aa11.24□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Vmn2r79E9Q067 851 aa11.23□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Slc39a2G3X943 309 aa11.23□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Flot1O08917 428 aa11.23□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Tcp11Q01755 566 aa11.23□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Nt5c2Q3V1L4 560 aa11.23□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Arid5bQ8BM75 1188 aaKnown RBP11.23□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Rab44Q8CB87 725 aa11.23□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Pdia6Q922R8 440 aaKnown RBP11.23□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Apol6B7ZC55 329 aa11.23□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Serpinb8O08800 374 aaKnown RBP11.23□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Nr5a1P33242 462 aa11.23□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Ighmbp2P40694 993 aa11.23□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Mnat1P51949 309 aa11.23□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 PhbP67778 272 aaKnown RBP11.23□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Zc3h18Q0P678 948 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 25 ms